RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 STAG3L3P0CL85 134 aa11.85□□□□□ -0.51
CDT1-202ENST00000562747 EMP1P54849 157 aa11.85□□□□□ -0.51
CDT1-202ENST00000562747 TAS2R60P59551 318 aa11.85□□□□□ -0.51
CDT1-202ENST00000562747 ERCC8Q13216 396 aa11.85□□□□□ -0.51
CDT1-202ENST00000562747 RAB24Q969Q5 203 aa11.85□□□□□ -0.51
CDT1-202ENST00000562747 IGKV2-40A0A087WW87 121 aaPredicted RBP11.84□□□□□ -0.51
CDT1-202ENST00000562747 TRAV10A0A0B4J240 114 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 RBAKDNA6NC62 111 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 ZNF705GA8MUZ8 300 aaPredicted RBP11.84□□□□□ -0.51
CDT1-202ENST00000562747 H7BYZ3 331 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 HMGB3O15347 200 aaKnown RBP11.84□□□□□ -0.51
CDT1-202ENST00000562747 IGKV2D-40P01614 121 aaPredicted RBP11.84□□□□□ -0.51
CDT1-202ENST00000562747 ARL14EPLP0DKL9 152 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 KIR3DS1Q14943 382 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 C12orf74Q32Q52 190 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 FAM74A1Q5RGS3 127 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 TMEM78Q5T7P6 136 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 GFI1BQ5VTD9 330 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 Q6ZTC4 211 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 KCNRGQ8N5I3 272 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 OR11H4Q8NGC9 324 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 RXFP4Q8TDU9 374 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 C2CD4CQ8TF44 421 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 FAM19A4Q96LR4 140 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 ACTR3CQ9C0K3 210 aaPredicted RBP11.84□□□□□ -0.51
CDT1-202ENST00000562747 AGPAT4-IT1Q9H0P7 198 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 OTORQ9NRC9 128 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 CYTL1Q9NRR1 136 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 DKK2Q9UBU2 259 aa11.84□□□□□ -0.51
CDT1-202ENST00000562747 YTHDF2Q9Y5A9 579 aaKnown RBP11.84□□□□□ -0.51
CDT1-202ENST00000562747 SLC25A5P05141 298 aaKnown RBP11.83□□□□□ -0.52
CDT1-202ENST00000562747 FAM222AQ5U5X8 452 aa11.83□□□□□ -0.52
CDT1-202ENST00000562747 LGALS9CQ6DKI2 356 aa11.83□□□□□ -0.52
CDT1-202ENST00000562747 ARPC5LQ9BPX5 153 aa11.83□□□□□ -0.52
CDT1-202ENST00000562747 A0A0D9SG52 128 aa11.82□□□□□ -0.52
CDT1-202ENST00000562747 TRBV7-9A0A0J9YWB2 115 aa11.82□□□□□ -0.52
CDT1-202ENST00000562747 KLLNB2CW77 178 aa11.82□□□□□ -0.52
CDT1-202ENST00000562747 NMBP08949 121 aa11.82□□□□□ -0.52
CDT1-202ENST00000562747 CRISP2P16562 243 aa11.82□□□□□ -0.52
CDT1-202ENST00000562747 Q6ZNX1 250 aa11.82□□□□□ -0.52
CDT1-202ENST00000562747 ARL6IP6Q8N6S5 226 aa11.82□□□□□ -0.52
CDT1-202ENST00000562747 SUN5Q8TC36 379 aa11.82□□□□□ -0.52
CDT1-202ENST00000562747 VGLL1Q99990 258 aa11.82□□□□□ -0.52
CDT1-202ENST00000562747 ZNF492Q9P255 531 aa11.82□□□□□ -0.52
CDT1-202ENST00000562747 PGPA6NDG6 321 aa11.81□□□□□ -0.52
CDT1-202ENST00000562747 DIRC3C9JPN6 131 aa11.81□□□□□ -0.52
CDT1-202ENST00000562747 J3KRW8 73 aa11.81□□□□□ -0.52
CDT1-202ENST00000562747 CXorf1O96002 111 aa11.81□□□□□ -0.52
CDT1-202ENST00000562747 PRM2P04554 102 aa11.81□□□□□ -0.52
CDT1-202ENST00000562747 GCHFRP30047 84 aa11.81□□□□□ -0.52
CDT1-202ENST00000562747 ZNF138P52744 262 aa11.81□□□□□ -0.52
CDT1-202ENST00000562747 TCTAP57738 103 aa11.81□□□□□ -0.52
CDT1-202ENST00000562747 AKR1C8PQ5T2L2 129 aa11.81□□□□□ -0.52
CDT1-202ENST00000562747 ZNF493Q6ZR52 646 aa11.81□□□□□ -0.52
CDT1-202ENST00000562747 CMTM2Q8TAZ6 248 aa11.81□□□□□ -0.52
CDT1-202ENST00000562747 C16orf74Q96GX8 76 aa11.81□□□□□ -0.52
CDT1-202ENST00000562747 NIPSNAP3BQ9BS92 247 aa11.81□□□□□ -0.52
CDT1-202ENST00000562747 TMEM167BQ9NRX6 74 aa11.81□□□□□ -0.52
CDT1-202ENST00000562747 TRAV12-3A0A0B4J271 114 aa11.8□□□□□ -0.52
CDT1-202ENST00000562747 CTXND1A0A1B0GTU2 59 aa11.8□□□□□ -0.52
CDT1-202ENST00000562747 C7orf71A4D174 169 aa11.8□□□□□ -0.52
CDT1-202ENST00000562747 LYRM9A8MSI8 78 aa11.8□□□□□ -0.52
CDT1-202ENST00000562747 HTN1P15515 57 aa11.8□□□□□ -0.52
CDT1-202ENST00000562747 AZU1P20160 251 aa11.8□□□□□ -0.52
CDT1-202ENST00000562747 ZNF767PQ75MW2 155 aa11.8□□□□□ -0.52
CDT1-202ENST00000562747 TMEM263Q8WUH6 116 aaKnown RBP11.8□□□□□ -0.52
CDT1-202ENST00000562747 ST6GAL2Q96JF0 529 aa11.8□□□□□ -0.52
CDT1-202ENST00000562747 HYLS1Q96M11 299 aa11.8□□□□□ -0.52
CDT1-202ENST00000562747 PYGO2Q9BRQ0 406 aa11.8□□□□□ -0.52
CDT1-202ENST00000562747 DEFB131BA0A096LNP1 70 aa11.79□□□□□ -0.52
CDT1-202ENST00000562747 KANTRA0A1W2PQU2 76 aa11.79□□□□□ -0.52
CDT1-202ENST00000562747 PLAC8L1A1L4L8 177 aa11.79□□□□□ -0.52
CDT1-202ENST00000562747 GPX1P07203 203 aa11.79□□□□□ -0.52
CDT1-202ENST00000562747 SSX7Q7RTT5 188 aa11.79□□□□□ -0.52
CDT1-202ENST00000562747 CCDC28AQ8IWP9 274 aa11.79□□□□□ -0.52
CDT1-202ENST00000562747 TCTE3Q8IZS6 198 aa11.79□□□□□ -0.52
CDT1-202ENST00000562747 RNASE8Q8TDE3 154 aaKnown RBP11.79□□□□□ -0.52
CDT1-202ENST00000562747 LENEPQ9Y5L5 61 aa11.79□□□□□ -0.52
CDT1-202ENST00000562747 IGLL5B9A064 214 aa11.78□□□□□ -0.52
CDT1-202ENST00000562747 BCL2L11O43521 198 aa11.78□□□□□ -0.52
CDT1-202ENST00000562747 ZNF324O75467 553 aaPredicted RBP11.78□□□□□ -0.52
CDT1-202ENST00000562747 BTN1A1Q13410 526 aa11.78□□□□□ -0.52
CDT1-202ENST00000562747 ZNF726P1Q15940 193 aa11.78□□□□□ -0.52
CDT1-202ENST00000562747 ZFAND2AQ8N6M9 145 aa11.78□□□□□ -0.52
CDT1-202ENST00000562747 TMED6Q8WW62 240 aa11.78□□□□□ -0.52
CDT1-202ENST00000562747 RNASE4P34096 147 aaKnown RBP11.77□□□□□ -0.53
CDT1-202ENST00000562747 DAD1P61803 113 aa11.77□□□□□ -0.53
CDT1-202ENST00000562747 EIF5AP63241 154 aaKnown RBP11.77□□□□□ -0.53
CDT1-202ENST00000562747 CD300CQ08708 224 aa11.77□□□□□ -0.53
CDT1-202ENST00000562747 Q8TAT8 98 aa11.77□□□□□ -0.53
CDT1-202ENST00000562747 LINC00467Q9BRT7 94 aa11.77□□□□□ -0.53
CDT1-202ENST00000562747 TIMM8BQ9Y5J9 83 aaPredicted RBP11.77□□□□□ -0.53
CDT1-202ENST00000562747 SERTM2A0A1B0GWG4 89 aa11.76□□□□□ -0.53
CDT1-202ENST00000562747 SEC11BP0C7V7 166 aa11.76□□□□□ -0.53
CDT1-202ENST00000562747 GOLT1AQ6ZVE7 132 aa11.76□□□□□ -0.53
CDT1-202ENST00000562747 C5orf17Q8NAS9 161 aa11.76□□□□□ -0.53
CDT1-202ENST00000562747 ZNF471Q9BX82 626 aaPredicted RBP11.76□□□□□ -0.53
CDT1-202ENST00000562747 RPH3ALQ9UNE2 315 aa11.76□□□□□ -0.53
CDT1-202ENST00000562747 FAT2Q9NYQ8 4349 aa11.75□□□□□ -0.53
CDT1-202ENST00000562747 IGHV4-4A0A075B6R2 117 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms