RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 NXPH4O95158 308 aa8.92□□□□□ -0.98
SF3B3-202ENST00000562722 GPX1P07203 203 aa8.92□□□□□ -0.98
SF3B3-202ENST00000562722 ERVFC1-1P60608 527 aa8.92□□□□□ -0.98
SF3B3-202ENST00000562722 CD300CQ08708 224 aa8.92□□□□□ -0.98
SF3B3-202ENST00000562722 CNPY1Q3B7I2 92 aa8.92□□□□□ -0.98
SF3B3-202ENST00000562722 STX12Q86Y82 276 aa8.92□□□□□ -0.98
SF3B3-202ENST00000562722 LINC00477Q96M19 166 aa8.92□□□□□ -0.98
SF3B3-202ENST00000562722 AAMDCQ9H7C9 122 aa8.92□□□□□ -0.98
SF3B3-202ENST00000562722 PRELID1Q9Y255 219 aa8.92□□□□□ -0.98
SF3B3-202ENST00000562722 KLF12Q9Y4X4 402 aa8.92□□□□□ -0.98
SF3B3-202ENST00000562722 KLLNB2CW77 178 aa8.91□□□□□ -0.98
SF3B3-202ENST00000562722 MPDU1O75352 247 aa8.91□□□□□ -0.98
SF3B3-202ENST00000562722 PYYP10082 97 aa8.91□□□□□ -0.98
SF3B3-202ENST00000562722 HIST1H1EP10412 219 aaKnown RBP8.91□□□□□ -0.98
SF3B3-202ENST00000562722 IL7P13232 177 aa8.91□□□□□ -0.98
SF3B3-202ENST00000562722 FGF7P21781 194 aa8.91□□□□□ -0.98
SF3B3-202ENST00000562722 FUSP35637 526 aaKnown RBP eCLIP8.91□□□□□ -0.98
SF3B3-202ENST00000562722 RPL29P47914 159 aaKnown RBP8.91□□□□□ -0.98
SF3B3-202ENST00000562722 HBG1P69891 147 aa8.91□□□□□ -0.98
SF3B3-202ENST00000562722 HBG2P69892 147 aa8.91□□□□□ -0.98
SF3B3-202ENST00000562722 ANXA2RQ3ZCQ2 193 aa8.91□□□□□ -0.98
SF3B3-202ENST00000562722 EXOC3-AS1Q8N2X6 119 aa8.91□□□□□ -0.98
SF3B3-202ENST00000562722 C18orf15Q96N68 181 aa8.91□□□□□ -0.98
SF3B3-202ENST00000562722 ARPC5LQ9BPX5 153 aa8.91□□□□□ -0.98
SF3B3-202ENST00000562722 AGPAT4-IT1Q9H0P7 198 aa8.91□□□□□ -0.98
SF3B3-202ENST00000562722 MRPL16Q9NX20 251 aaKnown RBP8.91□□□□□ -0.98
SF3B3-202ENST00000562722 TMEM14CQ9P0S9 112 aa8.91□□□□□ -0.98
SF3B3-202ENST00000562722 TRAV6A0A075B6T7 132 aa8.9□□□□□ -0.98
SF3B3-202ENST00000562722 IGKV2-40A0A087WW87 121 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-202ENST00000562722 SPINK4O60575 86 aa8.9□□□□□ -0.98
SF3B3-202ENST00000562722 ZNF324O75467 553 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-202ENST00000562722 IGKV2D-40P01614 121 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-202ENST00000562722 S100A11P31949 105 aa8.9□□□□□ -0.98
SF3B3-202ENST00000562722 SULT1A1P50225 295 aa8.9□□□□□ -0.98
SF3B3-202ENST00000562722 TCL1AP56279 114 aa8.9□□□□□ -0.98
SF3B3-202ENST00000562722 PDE6HQ13956 83 aa8.9□□□□□ -0.98
SF3B3-202ENST00000562722 TMEM78Q5T7P6 136 aa8.9□□□□□ -0.98
SF3B3-202ENST00000562722 FAM122CQ6P4D5 195 aa8.9□□□□□ -0.98
SF3B3-202ENST00000562722 ST6GAL2Q96JF0 529 aa8.9□□□□□ -0.98
SF3B3-202ENST00000562722 SDHCQ99643 169 aaPredicted RBP8.9□□□□□ -0.98
SF3B3-202ENST00000562722 LINC00467Q9BRT7 94 aa8.9□□□□□ -0.98
SF3B3-202ENST00000562722 RBM38Q9H0Z9 239 aaKnown RBP8.9□□□□□ -0.98
SF3B3-202ENST00000562722 PGPEP1Q9NXJ5 209 aa8.9□□□□□ -0.98
SF3B3-202ENST00000562722 IGSF23A1L1A6 192 aa8.89□□□□□ -0.99
SF3B3-202ENST00000562722 NDUFB4O95168 129 aa8.89□□□□□ -0.99
SF3B3-202ENST00000562722 ICAM4Q14773 271 aa8.89□□□□□ -0.99
SF3B3-202ENST00000562722 VWC2Q2TAL6 325 aa8.89□□□□□ -0.99
SF3B3-202ENST00000562722 IBA57Q5T440 356 aaKnown RBP8.89□□□□□ -0.99
SF3B3-202ENST00000562722 Q6ZRN7 208 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-202ENST00000562722 FAM19A4Q96LR4 140 aa8.89□□□□□ -0.99
SF3B3-202ENST00000562722 C2orf50Q96LR7 162 aa8.89□□□□□ -0.99
SF3B3-202ENST00000562722 C8orf49Q96NF6 230 aa8.89□□□□□ -0.99
SF3B3-202ENST00000562722 SEC22CQ9BRL7 303 aa8.89□□□□□ -0.99
SF3B3-202ENST00000562722 GPN1Q9HCN4 374 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-202ENST00000562722 LYRM2Q9NU23 88 aaPredicted RBP8.89□□□□□ -0.99
SF3B3-202ENST00000562722 PRO0255Q9UI72 69 aa8.89□□□□□ -0.99
SF3B3-202ENST00000562722 TP53TG3Q9ULZ0 132 aa8.89□□□□□ -0.99
SF3B3-202ENST00000562722 BOLA1Q9Y3E2 137 aa8.89□□□□□ -0.99
SF3B3-202ENST00000562722 IGHV1OR15-1A0A075B7D0 117 aa8.88□□□□□ -0.99
SF3B3-202ENST00000562722 TRAV9-2A0A087WT02 112 aa8.88□□□□□ -0.99
SF3B3-202ENST00000562722 LYRM1O43325 122 aa8.88□□□□□ -0.99
SF3B3-202ENST00000562722 CRISP2P16562 243 aa8.88□□□□□ -0.99
SF3B3-202ENST00000562722 SLAQ13239 276 aa8.88□□□□□ -0.99
SF3B3-202ENST00000562722 NFE4Q86UQ8 179 aa8.88□□□□□ -0.99
SF3B3-202ENST00000562722 VGLL1Q99990 258 aa8.88□□□□□ -0.99
SF3B3-202ENST00000562722 NUDT15Q9NV35 164 aa8.88□□□□□ -0.99
SF3B3-202ENST00000562722 HHLA3Q9XRX5 114 aa8.88□□□□□ -0.99
SF3B3-202ENST00000562722 TNFRSF18Q9Y5U5 241 aa8.88□□□□□ -0.99
SF3B3-202ENST00000562722 HERC1Q15751 4861 aa8.88□□□□□ -0.99
SF3B3-202ENST00000562722 TRGV4A0A0C4DH28 118 aa8.87□□□□□ -0.99
SF3B3-202ENST00000562722 PRAF2O60831 178 aa8.87□□□□□ -0.99
SF3B3-202ENST00000562722 IFNA5P01569 189 aa8.87□□□□□ -0.99
SF3B3-202ENST00000562722 TCRBP04435 133 aa8.87□□□□□ -0.99
SF3B3-202ENST00000562722 ZNF415Q09FC8 603 aa8.87□□□□□ -0.99
SF3B3-202ENST00000562722 MRPL23Q16540 153 aaKnown RBP8.87□□□□□ -0.99
SF3B3-202ENST00000562722 ATP6V1FQ16864 119 aa8.87□□□□□ -0.99
SF3B3-202ENST00000562722 GCSAMLQ5JQS6 135 aa8.87□□□□□ -0.99
SF3B3-202ENST00000562722 PRR9Q5T870 116 aa8.87□□□□□ -0.99
SF3B3-202ENST00000562722 CDPF1Q6NVV7 123 aa8.87□□□□□ -0.99
SF3B3-202ENST00000562722 LYPD5Q6UWN5 251 aa8.87□□□□□ -0.99
SF3B3-202ENST00000562722 C9orf47Q6ZRZ4 202 aa8.87□□□□□ -0.99
SF3B3-202ENST00000562722 TMEM252Q8N6L7 170 aa8.87□□□□□ -0.99
SF3B3-202ENST00000562722 SLC25A2Q9BXI2 301 aa8.87□□□□□ -0.99
SF3B3-202ENST00000562722 C11orf1Q9H5F2 150 aa8.87□□□□□ -0.99
SF3B3-202ENST00000562722 E5RGE8 158 aa8.86□□□□□ -0.99
SF3B3-202ENST00000562722 PLA2G10O15496 165 aa8.86□□□□□ -0.99
SF3B3-202ENST00000562722 NMBP08949 121 aa8.86□□□□□ -0.99
SF3B3-202ENST00000562722 DNAH10OSP0CZ25 163 aa8.86□□□□□ -0.99
SF3B3-202ENST00000562722 INAFM2P0DMQ5 153 aa8.86□□□□□ -0.99
SF3B3-202ENST00000562722 CRYBA4P53673 196 aa8.86□□□□□ -0.99
SF3B3-202ENST00000562722 RAB32Q13637 225 aa8.86□□□□□ -0.99
SF3B3-202ENST00000562722 Q6ZQT7 251 aa8.86□□□□□ -0.99
SF3B3-202ENST00000562722 MIR17HGQ75NE6 70 aa8.86□□□□□ -0.99
SF3B3-202ENST00000562722 NEGR1Q7Z3B1 354 aa8.86□□□□□ -0.99
SF3B3-202ENST00000562722 ZFAND2AQ8N6M9 145 aa8.86□□□□□ -0.99
SF3B3-202ENST00000562722 Q8TAT8 98 aa8.86□□□□□ -0.99
SF3B3-202ENST00000562722 THAP6Q8TBB0 222 aa8.86□□□□□ -0.99
SF3B3-202ENST00000562722 CHAC2Q8WUX2 184 aa8.86□□□□□ -0.99
SF3B3-202ENST00000562722 PCNPQ8WW12 178 aaKnown RBP8.86□□□□□ -0.99
SF3B3-202ENST00000562722 NPCDR1Q9BY65 106 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms