RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 OR1L4Q8NGR5 311 aa10.01□□□□□ -0.81
SPG7-205ENST00000561945 C2orf50Q96LR7 162 aa10.01□□□□□ -0.81
SPG7-205ENST00000561945 TMPRSS5Q9H3S3 457 aa10.01□□□□□ -0.81
SPG7-205ENST00000561945 TMEM14CQ9P0S9 112 aa10.01□□□□□ -0.81
SPG7-205ENST00000561945 MYCBP2O75592 4640 aa10.01□□□□□ -0.81
SPG7-205ENST00000561945 TRBV19A0A075B6N1 114 aa10□□□□□ -0.81
SPG7-205ENST00000561945 A0A096LPF7 62 aa10□□□□□ -0.81
SPG7-205ENST00000561945 TRAV5A0A0B4J249 113 aa10□□□□□ -0.81
SPG7-205ENST00000561945 L7N2F9 121 aa10□□□□□ -0.81
SPG7-205ENST00000561945 CRISP2P16562 243 aa10□□□□□ -0.81
SPG7-205ENST00000561945 VAMP2P63027 116 aa10□□□□□ -0.81
SPG7-205ENST00000561945 MIC13Q5XKP0 118 aa10□□□□□ -0.81
SPG7-205ENST00000561945 MARVELD1Q9BSK0 173 aa10□□□□□ -0.81
SPG7-205ENST00000561945 C7orf71A4D174 169 aa9.99□□□□□ -0.81
SPG7-205ENST00000561945 NDUFB4O95168 129 aa9.99□□□□□ -0.81
SPG7-205ENST00000561945 NMBP08949 121 aa9.99□□□□□ -0.81
SPG7-205ENST00000561945 PVALBP20472 110 aaPredicted RBP9.99□□□□□ -0.81
SPG7-205ENST00000561945 IL15RAQ13261 267 aa9.99□□□□□ -0.81
SPG7-205ENST00000561945 PDE6HQ13956 83 aa9.99□□□□□ -0.81
SPG7-205ENST00000561945 LINC00477Q96M19 166 aa9.99□□□□□ -0.81
SPG7-205ENST00000561945 SLC39A9Q9NUM3 307 aa9.99□□□□□ -0.81
SPG7-205ENST00000561945 UQCC1Q9NVA1 299 aa9.99□□□□□ -0.81
SPG7-205ENST00000561945 PRELID1Q9Y255 219 aa9.99□□□□□ -0.81
SPG7-205ENST00000561945 SPINK4O60575 86 aa9.98□□□□□ -0.81
SPG7-205ENST00000561945 IBA57Q5T440 356 aaKnown RBP9.98□□□□□ -0.81
SPG7-205ENST00000561945 C9orf47Q6ZRZ4 202 aa9.98□□□□□ -0.81
SPG7-205ENST00000561945 SCRT2Q9NQ03 307 aa9.98□□□□□ -0.81
SPG7-205ENST00000561945 GSN-AS1Q9NRJ2 163 aa9.98□□□□□ -0.81
SPG7-205ENST00000561945 LYRM2Q9NU23 88 aaPredicted RBP9.98□□□□□ -0.81
SPG7-205ENST00000561945 LSM5Q9Y4Y9 91 aaKnown RBP9.98□□□□□ -0.81
SPG7-205ENST00000561945 M0R3E3 92 aa9.97□□□□□ -0.81
SPG7-205ENST00000561945 CST7O76096 145 aa9.97□□□□□ -0.81
SPG7-205ENST00000561945 HIST1H1EP10412 219 aaKnown RBP9.97□□□□□ -0.81
SPG7-205ENST00000561945 S100A11P31949 105 aa9.97□□□□□ -0.81
SPG7-205ENST00000561945 SULT1A1P50225 295 aa9.97□□□□□ -0.81
SPG7-205ENST00000561945 BCAP31P51572 246 aa9.97□□□□□ -0.81
SPG7-205ENST00000561945 TCL1AP56279 114 aa9.97□□□□□ -0.81
SPG7-205ENST00000561945 LINC00315P59091 139 aa9.97□□□□□ -0.81
SPG7-205ENST00000561945 CYCSP99999 105 aaKnown RBP9.97□□□□□ -0.81
SPG7-205ENST00000561945 EIF4E3Q8N5X7 224 aaKnown RBP9.97□□□□□ -0.81
SPG7-205ENST00000561945 AGPAT4-IT1Q9H0P7 198 aa9.97□□□□□ -0.81
SPG7-205ENST00000561945 FAM24AA6NFZ4 105 aa9.96□□□□□ -0.82
SPG7-205ENST00000561945 J3KRW8 73 aa9.96□□□□□ -0.82
SPG7-205ENST00000561945 SSNA1O43805 119 aa9.96□□□□□ -0.82
SPG7-205ENST00000561945 PTTG1O95997 202 aa9.96□□□□□ -0.82
SPG7-205ENST00000561945 CAV2P51636 162 aa9.96□□□□□ -0.82
SPG7-205ENST00000561945 CD300CQ08708 224 aa9.96□□□□□ -0.82
SPG7-205ENST00000561945 ST6GAL2Q96JF0 529 aa9.96□□□□□ -0.82
SPG7-205ENST00000561945 FUT9Q9Y231 359 aa9.96□□□□□ -0.82
SPG7-205ENST00000561945 TRGV2A0A075B6R0 118 aa9.95□□□□□ -0.82
SPG7-205ENST00000561945 TRBV7-9A0A0J9YWB2 115 aa9.95□□□□□ -0.82
SPG7-205ENST00000561945 IGSF23A1L1A6 192 aa9.95□□□□□ -0.82
SPG7-205ENST00000561945 SIVA1O15304 175 aa9.95□□□□□ -0.82
SPG7-205ENST00000561945 MPDU1O75352 247 aa9.95□□□□□ -0.82
SPG7-205ENST00000561945 S100A10P60903 97 aa9.95□□□□□ -0.82
SPG7-205ENST00000561945 ERCC8Q13216 396 aa9.95□□□□□ -0.82
SPG7-205ENST00000561945 BTN1A1Q13410 526 aa9.95□□□□□ -0.82
SPG7-205ENST00000561945 ATP6V1FQ16864 119 aa9.95□□□□□ -0.82
SPG7-205ENST00000561945 TMEM252Q8N6L7 170 aa9.95□□□□□ -0.82
SPG7-205ENST00000561945 ZFAND2AQ8N6M9 145 aa9.95□□□□□ -0.82
SPG7-205ENST00000561945 KLF12Q9Y4X4 402 aa9.95□□□□□ -0.82
SPG7-205ENST00000561945 DNAH8Q96JB1 4490 aa9.95□□□□□ -0.82
SPG7-205ENST00000561945 VPS13BQ7Z7G8 4022 aa9.94□□□□□ -0.82
SPG7-205ENST00000561945 RAB32Q13637 225 aa9.94□□□□□ -0.82
SPG7-205ENST00000561945 CDPF1Q6NVV7 123 aa9.94□□□□□ -0.82
SPG7-205ENST00000561945 NMES1Q9C002 83 aa9.94□□□□□ -0.82
SPG7-205ENST00000561945 PGPEP1Q9NXJ5 209 aa9.94□□□□□ -0.82
SPG7-205ENST00000561945 TRGV1A0A0A0MS02 117 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 UBE2L5PA0A1B0GUS4 154 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 SIX6O95475 246 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 PYYP10082 97 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 HBG1P69891 147 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 HBG2P69892 147 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 BAXQ07812 192 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 PRR9Q5T870 116 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 STX12Q86Y82 276 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 FAM167A-AS1Q96KT0 104 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 VGLL1Q99990 258 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 SLC25A2Q9BXI2 301 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 NPCDR1Q9BY65 106 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 ZNF492Q9P255 531 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 PRO0255Q9UI72 69 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 TIMM9Q9Y5J7 89 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 ICOSQ9Y6W8 199 aa9.93□□□□□ -0.82
SPG7-205ENST00000561945 GPX1P07203 203 aa9.92□□□□□ -0.82
SPG7-205ENST00000561945 RNASE4P34096 147 aaKnown RBP9.92□□□□□ -0.82
SPG7-205ENST00000561945 CRYBA4P53673 196 aa9.92□□□□□ -0.82
SPG7-205ENST00000561945 SLAQ13239 276 aa9.92□□□□□ -0.82
SPG7-205ENST00000561945 IQCF2Q8IXL9 164 aa9.92□□□□□ -0.82
SPG7-205ENST00000561945 EXOC3-AS1Q8N2X6 119 aa9.92□□□□□ -0.82
SPG7-205ENST00000561945 AAMDCQ9H7C9 122 aa9.92□□□□□ -0.82
SPG7-205ENST00000561945 TP53TG3Q9ULZ0 132 aa9.92□□□□□ -0.82
SPG7-205ENST00000561945 IGHV1OR15-1A0A075B7D0 117 aa9.91□□□□□ -0.82
SPG7-205ENST00000561945 E5RGE8 158 aa9.91□□□□□ -0.82
SPG7-205ENST00000561945 K7EP13 123 aa9.91□□□□□ -0.82
SPG7-205ENST00000561945 PAX4O43316 350 aa9.91□□□□□ -0.82
SPG7-205ENST00000561945 NXPH4O95158 308 aa9.91□□□□□ -0.82
SPG7-205ENST00000561945 FHL2Q14192 279 aa9.91□□□□□ -0.82
SPG7-205ENST00000561945 GCSAMLQ5JQS6 135 aa9.91□□□□□ -0.82
SPG7-205ENST00000561945 LYPD5Q6UWN5 251 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms