RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 TMEM42Q69YG0 159 aa2.35□□□□□ -2.03
SMG1-204ENST00000561940 RPL22L1Q6P5R6 122 aaKnown RBP2.35□□□□□ -2.03
SMG1-204ENST00000561940 Q6ZRN7 208 aaPredicted RBP2.35□□□□□ -2.03
SMG1-204ENST00000561940 KTN1-AS1Q86SY8 53 aa2.35□□□□□ -2.03
SMG1-204ENST00000561940 HIST1H2BHQ93079 126 aa2.35□□□□□ -2.03
SMG1-204ENST00000561940 BTF3L4Q96K17 158 aa2.35□□□□□ -2.03
SMG1-204ENST00000561940 HIST1H2BNQ99877 126 aa2.35□□□□□ -2.03
SMG1-204ENST00000561940 HIST1H2BMQ99879 126 aa2.35□□□□□ -2.03
SMG1-204ENST00000561940 CHST6Q9GZX3 395 aa2.35□□□□□ -2.03
SMG1-204ENST00000561940 DCSTAMPQ9H295 470 aa2.35□□□□□ -2.03
SMG1-204ENST00000561940 C8orf4Q9NR00 106 aa2.35□□□□□ -2.03
SMG1-204ENST00000561940 FBXO5Q9UKT4 447 aa2.35□□□□□ -2.03
SMG1-204ENST00000561940 BOKQ9UMX3 212 aaPredicted RBP2.35□□□□□ -2.03
SMG1-204ENST00000561940 TMEM56-RWDD3S4R434 201 aa2.35□□□□□ -2.03
SMG1-204ENST00000561940 CLPSL1A2RUU4 121 aa2.34□□□□□ -2.03
SMG1-204ENST00000561940 SMIM9A6NGZ8 99 aa2.34□□□□□ -2.03
SMG1-204ENST00000561940 IFNA6P05013 189 aa2.34□□□□□ -2.03
SMG1-204ENST00000561940 HBA1P69905 142 aa2.34□□□□□ -2.03
SMG1-204ENST00000561940 TMED2Q15363 201 aa2.34□□□□□ -2.03
SMG1-204ENST00000561940 KCNJ8Q15842 424 aa2.34□□□□□ -2.03
SMG1-204ENST00000561940 PRAP1Q96NZ9 151 aa2.34□□□□□ -2.03
SMG1-204ENST00000561940 OR8D2Q9GZM6 311 aa2.34□□□□□ -2.03
SMG1-204ENST00000561940 RYR2Q92736 4967 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 A0A087WUJ7 227 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 HMSDA8MTL9 139 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 H0YGG7 62 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 K7EIL1 84 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 FAAHO00519 579 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 FADS1O60427 444 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 OR2J2O76002 312 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 HAND1O96004 215 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 IFNA10P01566 189 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 PPBPP02775 128 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 SDC4P31431 198 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 CDK10Q15131 360 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 NDUFA5Q16718 116 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 IAH1Q2TAA2 248 aaPredicted RBP2.33□□□□□ -2.04
SMG1-204ENST00000561940 OR6V1Q8N148 313 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 TMEM35BQ8NCS4 154 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 OR13C4Q8NGS5 318 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 TSPAN32Q96QS1 320 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 NIPSNAP1Q9BPW8 284 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 BPESC1Q9GZL8 116 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 ARL2BPQ9Y2Y0 163 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 NUP210LQ5VU65 1888 aa2.33□□□□□ -2.04
SMG1-204ENST00000561940 TRAV26-2A0A0B4J265 109 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 A0A0G2JMM0 328 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 A0A1W2PPB8 328 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 A0A1W2PRS3 328 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 DPRXA6NFQ7 191 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 KIR3DP1A8MWS1 328 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 MAXP61244 160 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 ERVS71-1P61550 626 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 SPANXN3Q5MJ09 141 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 AADACL3Q5VUY0 350 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 SIGLECL1Q8N7X8 197 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 TMEM147Q9BVK8 224 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 CCDC90BQ9GZT6 254 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 TLNRD1Q9H1K6 362 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 TRABDQ9H4I3 376 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 ANKRD36A6QL64 1941 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 FREM3P0C091 2139 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 UBR4Q5T4S7 5183 aa2.32□□□□□ -2.04
SMG1-204ENST00000561940 WNK2Q9Y3S1 2297 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 TRAV9-1A0A075B6T8 112 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 MEIKINA0A087WXM9 373 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 EXOC1LA0A1B0GW35 172 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 EVX1P49640 407 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 FXYD2P54710 66 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 AQP4P55087 323 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 TMEM155Q4W5P6 130 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 KRT222Q8N1A0 295 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 WFDC9Q8NEX5 89 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 TOMM6Q96B49 74 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 DERL1Q9BUN8 251 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 KIFC1Q9BW19 673 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 C20orf27Q9GZN8 174 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 CENPHQ9H3R5 247 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 NMNAT1Q9HAN9 279 aaPredicted RBP2.31□□□□□ -2.04
SMG1-204ENST00000561940 PRELID3BQ9Y3B1 194 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
SMG1-204ENST00000561940 TRBV10-2A0A0K0K1G8 114 aa2.3□□□□□ -2.04
SMG1-204ENST00000561940 CNIH1O95406 144 aa2.3□□□□□ -2.04
SMG1-204ENST00000561940 RBP1P09455 135 aa2.3□□□□□ -2.04
SMG1-204ENST00000561940 RPS4Y1P22090 263 aaKnown RBP2.3□□□□□ -2.04
SMG1-204ENST00000561940 CMPK1P30085 196 aa2.3□□□□□ -2.04
SMG1-204ENST00000561940 OR4S1Q8NGB4 309 aa2.3□□□□□ -2.04
SMG1-204ENST00000561940 FAM172AQ8WUF8 416 aa2.3□□□□□ -2.04
SMG1-204ENST00000561940 RASSF5Q8WWW0 418 aa2.3□□□□□ -2.04
SMG1-204ENST00000561940 TSLPQ969D9 159 aa2.3□□□□□ -2.04
SMG1-204ENST00000561940 MUCL1Q96DR8 90 aa2.3□□□□□ -2.04
SMG1-204ENST00000561940 RNF122Q9H9V4 155 aa2.3□□□□□ -2.04
SMG1-204ENST00000561940 PROK2Q9HC23 129 aa2.3□□□□□ -2.04
SMG1-204ENST00000561940 EML6Q6ZMW3 1958 aa2.3□□□□□ -2.04
SMG1-204ENST00000561940 DOCK4Q8N1I0 1966 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 hADV38S2A0JD32 116 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 SIGLEC16A6NMB1 481 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 H3BQV1 296 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 PDE6DO43924 150 aa2.29□□□□□ -2.04
SMG1-204ENST00000561940 ZNF737O75373 536 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms