RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 CD300CQ08708 224 aa17.68■□□□□ 0.42
NME3-202ENST00000561637 BTN1A1Q13410 526 aa17.68■□□□□ 0.42
NME3-202ENST00000561637 RNF212Q495C1 297 aa17.68■□□□□ 0.42
NME3-202ENST00000561637 FAM122CQ6P4D5 195 aa17.68■□□□□ 0.42
NME3-202ENST00000561637 Q6ZQT7 251 aa17.68■□□□□ 0.42
NME3-202ENST00000561637 LINC00612Q8N6U2 182 aa17.68■□□□□ 0.42
NME3-202ENST00000561637 C15orf53Q8NAA6 179 aa17.68■□□□□ 0.42
NME3-202ENST00000561637 RNF141Q8WVD5 230 aa17.68■□□□□ 0.42
NME3-202ENST00000561637 MPC2O95563 127 aa17.67■□□□□ 0.42
NME3-202ENST00000561637 CYCSP99999 105 aaKnown RBP17.67■□□□□ 0.42
NME3-202ENST00000561637 PRR9Q5T870 116 aa17.67■□□□□ 0.42
NME3-202ENST00000561637 FXYD5Q96DB9 178 aa17.67■□□□□ 0.42
NME3-202ENST00000561637 PHYHIPLQ96FC7 376 aa17.67■□□□□ 0.42
NME3-202ENST00000561637 FAM19A4Q96LR4 140 aa17.67■□□□□ 0.42
NME3-202ENST00000561637 VGLL1Q99990 258 aa17.67■□□□□ 0.42
NME3-202ENST00000561637 LRP1BQ9NZR2 4599 aa17.66■□□□□ 0.42
NME3-202ENST00000561637 GAGE12BA1L429 117 aa17.66■□□□□ 0.42
NME3-202ENST00000561637 GAGE7O76087 117 aa17.66■□□□□ 0.42
NME3-202ENST00000561637 GAGE12FP0CL80 117 aa17.66■□□□□ 0.42
NME3-202ENST00000561637 GAGE12GP0CL81 117 aa17.66■□□□□ 0.42
NME3-202ENST00000561637 GAGE12IP0CL82 117 aa17.66■□□□□ 0.42
NME3-202ENST00000561637 PDE6HQ13956 83 aa17.66■□□□□ 0.42
NME3-202ENST00000561637 ZNF503Q96F45 646 aa17.66■□□□□ 0.42
NME3-202ENST00000561637 ATP5SQ99766 215 aa17.66■□□□□ 0.42
NME3-202ENST00000561637 HSPB11Q9Y547 144 aa17.66■□□□□ 0.42
NME3-202ENST00000561637 C7orf71A4D174 169 aa17.65■□□□□ 0.42
NME3-202ENST00000561637 HOXA5P20719 270 aa17.65■□□□□ 0.42
NME3-202ENST00000561637 CCDC28AQ8IWP9 274 aa17.65■□□□□ 0.42
NME3-202ENST00000561637 OR51M1Q9H341 326 aa17.65■□□□□ 0.42
NME3-202ENST00000561637 WFDC1Q9HC57 220 aa17.65■□□□□ 0.42
NME3-202ENST00000561637 MBD2Q9UBB5 411 aa17.65■□□□□ 0.42
NME3-202ENST00000561637 PRELID1Q9Y255 219 aa17.65■□□□□ 0.42
NME3-202ENST00000561637 KLLNB2CW77 178 aa17.64■□□□□ 0.41
NME3-202ENST00000561637 NBEAP1P0C6P0 100 aa17.64■□□□□ 0.41
NME3-202ENST00000561637 DEFA1P59665 94 aa17.64■□□□□ 0.41
NME3-202ENST00000561637 DEFA3P59666 94 aa17.64■□□□□ 0.41
NME3-202ENST00000561637 PAXXQ9BUH6 204 aa17.64■□□□□ 0.41
NME3-202ENST00000561637 FUT9Q9Y231 359 aa17.64■□□□□ 0.41
NME3-202ENST00000561637 RNASE4P34096 147 aaKnown RBP17.63■□□□□ 0.41
NME3-202ENST00000561637 Q6ZTI0 123 aa17.63■□□□□ 0.41
NME3-202ENST00000561637 ATG101Q9BSB4 218 aa17.63■□□□□ 0.41
NME3-202ENST00000561637 ZNF324O75467 553 aaPredicted RBP17.62■□□□□ 0.41
NME3-202ENST00000561637 SLC25A5P05141 298 aaKnown RBP17.62■□□□□ 0.41
NME3-202ENST00000561637 OR5I1Q13606 314 aa17.62■□□□□ 0.41
NME3-202ENST00000561637 FFAR4Q5NUL3 377 aa17.62■□□□□ 0.41
NME3-202ENST00000561637 ZFAND2AQ8N6M9 145 aa17.62■□□□□ 0.41
NME3-202ENST00000561637 C11orf72Q8NBR9 251 aa17.62■□□□□ 0.41
NME3-202ENST00000561637 Q8TAT8 98 aa17.62■□□□□ 0.41
NME3-202ENST00000561637 PYGO2Q9BRQ0 406 aa17.62■□□□□ 0.41
NME3-202ENST00000561637 MRPL32Q9BYC8 188 aaKnown RBP17.62■□□□□ 0.41
NME3-202ENST00000561637 AAMDCQ9H7C9 122 aa17.62■□□□□ 0.41
NME3-202ENST00000561637 GSN-AS1Q9NRJ2 163 aa17.62■□□□□ 0.41
NME3-202ENST00000561637 TRAV26-1A0A087WT03 109 aa17.61■□□□□ 0.41
NME3-202ENST00000561637 A0A0J9YY99 117 aa17.61■□□□□ 0.41
NME3-202ENST00000561637 SNURFLB1AK76 121 aa17.61■□□□□ 0.41
NME3-202ENST00000561637 RPL12P30050 165 aaKnown RBP17.61■□□□□ 0.41
NME3-202ENST00000561637 C9orf47Q6ZRZ4 202 aa17.61■□□□□ 0.41
NME3-202ENST00000561637 ZNRF2Q8NHG8 242 aa17.61■□□□□ 0.41
NME3-202ENST00000561637 LINC00477Q96M19 166 aa17.61■□□□□ 0.41
NME3-202ENST00000561637 TMPRSS5Q9H3S3 457 aa17.61■□□□□ 0.41
NME3-202ENST00000561637 LINC00588Q9Y4M8 146 aa17.61■□□□□ 0.41
NME3-202ENST00000561637 OR7C2O60412 319 aa17.6■□□□□ 0.41
NME3-202ENST00000561637 CRISP2P16562 243 aa17.6■□□□□ 0.41
NME3-202ENST00000561637 MAPKAPK5-AS1Q8N8E1 139 aa17.6■□□□□ 0.41
NME3-202ENST00000561637 KCNIP2Q9NS61 270 aa17.6■□□□□ 0.41
NME3-202ENST00000561637 TP53TG3Q9ULZ0 132 aa17.6■□□□□ 0.41
NME3-202ENST00000561637 ALG5Q9Y673 324 aa17.6■□□□□ 0.41
NME3-202ENST00000561637 C17orf112F2Z3M2 114 aa17.59■□□□□ 0.41
NME3-202ENST00000561637 HERC1Q15751 4861 aa17.59■□□□□ 0.41
NME3-202ENST00000561637 KLF12Q9Y4X4 402 aa17.58■□□□□ 0.4
NME3-202ENST00000561637 GPX1P07203 203 aa17.57■□□□□ 0.4
NME3-202ENST00000561637 RANP62826 216 aaKnown RBP17.57■□□□□ 0.4
NME3-202ENST00000561637 UBE2L3P68036 154 aaKnown RBP17.57■□□□□ 0.4
NME3-202ENST00000561637 DAZ2Q13117 558 aaKnown RBP17.57■□□□□ 0.4
NME3-202ENST00000561637 TMEM78Q5T7P6 136 aa17.57■□□□□ 0.4
NME3-202ENST00000561637 ZNF492Q9P255 531 aa17.57■□□□□ 0.4
NME3-202ENST00000561637 APOBP04114 4563 aaKnown RBP17.57■□□□□ 0.4
NME3-202ENST00000561637 GNPNAT1Q96EK6 184 aaPredicted RBP17.56■□□□□ 0.4
NME3-202ENST00000561637 Q9H3A6 140 aa17.56■□□□□ 0.4
NME3-202ENST00000561637 CDK2AP2O75956 126 aa17.55■□□□□ 0.4
NME3-202ENST00000561637 IFNA5P01569 189 aa17.55■□□□□ 0.4
NME3-202ENST00000561637 PET100P0DJ07 73 aa17.55■□□□□ 0.4
NME3-202ENST00000561637 M6PRP20645 277 aa17.55■□□□□ 0.4
NME3-202ENST00000561637 C1orf134Q5TEV5 83 aa17.55■□□□□ 0.4
NME3-202ENST00000561637 EIF4E3Q8N5X7 224 aaKnown RBP17.55■□□□□ 0.4
NME3-202ENST00000561637 SCGB1C1Q8TD33 95 aa17.55■□□□□ 0.4
NME3-202ENST00000561637 LINC00467Q9BRT7 94 aa17.55■□□□□ 0.4
NME3-202ENST00000561637 TRGV1A0A0A0MS02 117 aa17.54■□□□□ 0.4
NME3-202ENST00000561637 C16orf90A8MZG2 172 aa17.54■□□□□ 0.4
NME3-202ENST00000561637 ZNF138P52744 262 aa17.54■□□□□ 0.4
NME3-202ENST00000561637 FAM3BP58499 235 aaPredicted RBP17.54■□□□□ 0.4
NME3-202ENST00000561637 SOHLH1Q5JUK2 328 aa17.54■□□□□ 0.4
NME3-202ENST00000561637 SSX7Q7RTT5 188 aa17.54■□□□□ 0.4
NME3-202ENST00000561637 RXFP4Q8TDU9 374 aa17.54■□□□□ 0.4
NME3-202ENST00000561637 NBDYA0A0U1RRE5 68 aa17.53■□□□□ 0.4
NME3-202ENST00000561637 RAB2AP61019 212 aa17.53■□□□□ 0.4
NME3-202ENST00000561637 ANXA2RQ3ZCQ2 193 aa17.53■□□□□ 0.4
NME3-202ENST00000561637 ZNF680Q8NEM1 530 aa17.53■□□□□ 0.4
NME3-202ENST00000561637 BATF3Q9NR55 127 aa17.53■□□□□ 0.4
NME3-202ENST00000561637 CCL18P55774 89 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms