RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 IGKV2D-40P01614 121 aaPredicted RBP16.84■□□□□ 0.29
CDR2-202ENST00000561630 GIPP09681 153 aaPredicted RBP16.84■□□□□ 0.29
CDR2-202ENST00000561630 TAS2R45P59539 299 aa16.84■□□□□ 0.29
CDR2-202ENST00000561630 UBE2L3P68036 154 aaKnown RBP16.84■□□□□ 0.29
CDR2-202ENST00000561630 KHDC3LQ587J8 217 aa16.84■□□□□ 0.29
CDR2-202ENST00000561630 CCDC28AQ8IWP9 274 aa16.84■□□□□ 0.29
CDR2-202ENST00000561630 AQP10Q96PS8 301 aa16.84■□□□□ 0.29
CDR2-202ENST00000561630 M6PRP20645 277 aa16.83■□□□□ 0.28
CDR2-202ENST00000561630 ACOT6Q3I5F7 207 aaPredicted RBP16.83■□□□□ 0.28
CDR2-202ENST00000561630 Q5BKY6 102 aa16.83■□□□□ 0.28
CDR2-202ENST00000561630 TMEM88Q6PEY1 159 aa16.83■□□□□ 0.28
CDR2-202ENST00000561630 LYPD1Q8N2G4 141 aa16.83■□□□□ 0.28
CDR2-202ENST00000561630 PYGO2Q9BRQ0 406 aa16.83■□□□□ 0.28
CDR2-202ENST00000561630 NOP10Q9NPE3 64 aaKnown RBP16.83■□□□□ 0.28
CDR2-202ENST00000561630 C7orf71A4D174 169 aa16.82■□□□□ 0.28
CDR2-202ENST00000561630 NMBP08949 121 aa16.82■□□□□ 0.28
CDR2-202ENST00000561630 CRISP2P16562 243 aa16.82■□□□□ 0.28
CDR2-202ENST00000561630 RANP62826 216 aaKnown RBP16.82■□□□□ 0.28
CDR2-202ENST00000561630 ZNF266Q14584 549 aa16.82■□□□□ 0.28
CDR2-202ENST00000561630 RGS21Q2M5E4 152 aa16.82■□□□□ 0.28
CDR2-202ENST00000561630 TMEM78Q5T7P6 136 aa16.82■□□□□ 0.28
CDR2-202ENST00000561630 POM121L12Q8N7R1 296 aa16.82■□□□□ 0.28
CDR2-202ENST00000561630 VGLL1Q99990 258 aa16.82■□□□□ 0.28
CDR2-202ENST00000561630 CBY3A6NI87 242 aa16.81■□□□□ 0.28
CDR2-202ENST00000561630 Q9H3A6 140 aa16.81■□□□□ 0.28
CDR2-202ENST00000561630 ZNF324O75467 553 aaPredicted RBP16.8■□□□□ 0.28
CDR2-202ENST00000561630 CSN1S1P47710 185 aa16.8■□□□□ 0.28
CDR2-202ENST00000561630 CD300CQ08708 224 aa16.8■□□□□ 0.28
CDR2-202ENST00000561630 ZNF492Q9P255 531 aa16.8■□□□□ 0.28
CDR2-202ENST00000561630 EIF3GO75821 320 aaKnown RBP eCLIP16.79■□□□□ 0.28
CDR2-202ENST00000561630 ATP5G1P05496 136 aa16.79■□□□□ 0.28
CDR2-202ENST00000561630 ATP5G3P48201 142 aa16.79■□□□□ 0.28
CDR2-202ENST00000561630 RAB2AP61019 212 aa16.79■□□□□ 0.28
CDR2-202ENST00000561630 ZFAND2AQ8N6M9 145 aa16.79■□□□□ 0.28
CDR2-202ENST00000561630 A0A1W2PPV4 95 aa16.78■□□□□ 0.28
CDR2-202ENST00000561630 RBAKDNA6NC62 111 aa16.78■□□□□ 0.28
CDR2-202ENST00000561630 GPX1P07203 203 aa16.78■□□□□ 0.28
CDR2-202ENST00000561630 RNASE4P34096 147 aaKnown RBP16.78■□□□□ 0.28
CDR2-202ENST00000561630 ZNF138P52744 262 aa16.78■□□□□ 0.28
CDR2-202ENST00000561630 BTN1A1Q13410 526 aa16.78■□□□□ 0.28
CDR2-202ENST00000561630 PQLC2Q6ZP29 291 aa16.78■□□□□ 0.28
CDR2-202ENST00000561630 LINC00612Q8N6U2 182 aa16.78■□□□□ 0.28
CDR2-202ENST00000561630 HSD17B11Q8NBQ5 300 aa16.78■□□□□ 0.28
CDR2-202ENST00000561630 OR10G4Q8NGN3 311 aa16.78■□□□□ 0.28
CDR2-202ENST00000561630 OR10G9Q8NGN4 311 aa16.78■□□□□ 0.28
CDR2-202ENST00000561630 OR10G7Q8NGN6 311 aa16.78■□□□□ 0.28
CDR2-202ENST00000561630 OR2G3Q8NGZ4 309 aa16.78■□□□□ 0.28
CDR2-202ENST00000561630 LINC00467Q9BRT7 94 aa16.78■□□□□ 0.28
CDR2-202ENST00000561630 TRBV7-9A0A0J9YWB2 115 aa16.77■□□□□ 0.28
CDR2-202ENST00000561630 SNURFLB1AK76 121 aa16.77■□□□□ 0.28
CDR2-202ENST00000561630 F5H768 121 aa16.77■□□□□ 0.28
CDR2-202ENST00000561630 C15orf53Q8NAA6 179 aa16.77■□□□□ 0.28
CDR2-202ENST00000561630 PSMG3Q9BT73 122 aaPredicted RBP16.77■□□□□ 0.28
CDR2-202ENST00000561630 INO80EQ8NBZ0 244 aaPredicted RBP16.76■□□□□ 0.27
CDR2-202ENST00000561630 RXFP4Q8TDU9 374 aa16.76■□□□□ 0.27
CDR2-202ENST00000561630 DAZ2Q13117 558 aaKnown RBP16.75■□□□□ 0.27
CDR2-202ENST00000561630 PRR9Q5T870 116 aa16.75■□□□□ 0.27
CDR2-202ENST00000561630 Q8TAT8 98 aa16.75■□□□□ 0.27
CDR2-202ENST00000561630 OTORQ9NRC9 128 aa16.75■□□□□ 0.27
CDR2-202ENST00000561630 DNAH2Q9P225 4427 aa16.74■□□□□ 0.27
CDR2-202ENST00000561630 RNF222A6NCQ9 220 aa16.74■□□□□ 0.27
CDR2-202ENST00000561630 DIRC3C9JPN6 131 aa16.74■□□□□ 0.27
CDR2-202ENST00000561630 ATP6V0CP27449 155 aa16.74■□□□□ 0.27
CDR2-202ENST00000561630 ANXA2RQ3ZCQ2 193 aa16.74■□□□□ 0.27
CDR2-202ENST00000561630 RNF212Q495C1 297 aa16.74■□□□□ 0.27
CDR2-202ENST00000561630 EIF4E3Q8N5X7 224 aaKnown RBP16.74■□□□□ 0.27
CDR2-202ENST00000561630 ZNF680Q8NEM1 530 aa16.74■□□□□ 0.27
CDR2-202ENST00000561630 OR2T35Q8NGX2 323 aa16.74■□□□□ 0.27
CDR2-202ENST00000561630 TNFSF18Q9UNG2 199 aa16.74■□□□□ 0.27
CDR2-202ENST00000561630 FXYD6-FXYD2A0A087WZ82 144 aa16.73■□□□□ 0.27
CDR2-202ENST00000561630 HMGB3O15347 200 aaKnown RBP16.73■□□□□ 0.27
CDR2-202ENST00000561630 SERF2P84101 59 aa16.73■□□□□ 0.27
CDR2-202ENST00000561630 UBE2DNLQ8IWF7 75 aa16.73■□□□□ 0.27
CDR2-202ENST00000561630 C11orf72Q8NBR9 251 aa16.73■□□□□ 0.27
CDR2-202ENST00000561630 HYLS1Q96M11 299 aa16.73■□□□□ 0.27
CDR2-202ENST00000561630 PGPA6NDG6 321 aa16.72■□□□□ 0.27
CDR2-202ENST00000561630 MBP02144 154 aa16.72■□□□□ 0.27
CDR2-202ENST00000561630 CDC34P49427 236 aaPredicted RBP16.72■□□□□ 0.27
CDR2-202ENST00000561630 FAM74A1Q5RGS3 127 aa16.72■□□□□ 0.27
CDR2-202ENST00000561630 GSN-AS1Q9NRJ2 163 aa16.72■□□□□ 0.27
CDR2-202ENST00000561630 GAGE12BA1L429 117 aa16.71■□□□□ 0.27
CDR2-202ENST00000561630 GAGE7O76087 117 aa16.71■□□□□ 0.27
CDR2-202ENST00000561630 GAGE12FP0CL80 117 aa16.71■□□□□ 0.27
CDR2-202ENST00000561630 GAGE12GP0CL81 117 aa16.71■□□□□ 0.27
CDR2-202ENST00000561630 GAGE12IP0CL82 117 aa16.71■□□□□ 0.27
CDR2-202ENST00000561630 STAG3L2P0CL84 134 aa16.71■□□□□ 0.27
CDR2-202ENST00000561630 STAG3L3P0CL85 134 aa16.71■□□□□ 0.27
CDR2-202ENST00000561630 ARL6IP6Q8N6S5 226 aa16.71■□□□□ 0.27
CDR2-202ENST00000561630 CMTM2Q8TAZ6 248 aa16.71■□□□□ 0.27
CDR2-202ENST00000561630 SH3BGRL3Q9H299 93 aa16.71■□□□□ 0.27
CDR2-202ENST00000561630 LENEPQ9Y5L5 61 aa16.71■□□□□ 0.27
CDR2-202ENST00000561630 HECTD4Q9Y4D8 3996 aa16.7■□□□□ 0.26
CDR2-202ENST00000561630 G3V3Q6 166 aa16.7■□□□□ 0.26
CDR2-202ENST00000561630 RGS13O14921 159 aa16.7■□□□□ 0.26
CDR2-202ENST00000561630 ARL14EPLP0DKL9 152 aa16.7■□□□□ 0.26
CDR2-202ENST00000561630 RPL7L1Q6DKI1 246 aaKnown RBP16.7■□□□□ 0.26
CDR2-202ENST00000561630 Q6ZQT7 251 aa16.7■□□□□ 0.26
CDR2-202ENST00000561630 TMED6Q8WW62 240 aa16.7■□□□□ 0.26
CDR2-202ENST00000561630 RAB24Q969Q5 203 aa16.7■□□□□ 0.26
CDR2-202ENST00000561630 IGHV1OR15-1A0A075B7D0 117 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms