RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 J3KRW8 73 aa10.94□□□□□ -0.66
CCDC113-203ENST00000561517 IGKV2D-40P01614 121 aaPredicted RBP10.94□□□□□ -0.66
CCDC113-203ENST00000561517 NMBP08949 121 aa10.94□□□□□ -0.66
CCDC113-203ENST00000561517 DEFB130BP0DP73 79 aa10.94□□□□□ -0.66
CCDC113-203ENST00000561517 DEFB130AP0DP74 79 aa10.94□□□□□ -0.66
CCDC113-203ENST00000561517 HTN3P15516 51 aa10.94□□□□□ -0.66
CCDC113-203ENST00000561517 UBE2L3P68036 154 aaKnown RBP10.94□□□□□ -0.66
CCDC113-203ENST00000561517 ZNF266Q14584 549 aa10.94□□□□□ -0.66
CCDC113-203ENST00000561517 VGLL1Q99990 258 aa10.94□□□□□ -0.66
CCDC113-203ENST00000561517 PYGO2Q9BRQ0 406 aa10.94□□□□□ -0.66
CCDC113-203ENST00000561517 NACAE9PAV3 2078 aa10.94□□□□□ -0.66
CCDC113-203ENST00000561517 C7orf71A4D174 169 aa10.93□□□□□ -0.66
CCDC113-203ENST00000561517 P0DMU3 169 aa10.93□□□□□ -0.66
CCDC113-203ENST00000561517 FAM231AP0DMU4 169 aa10.93□□□□□ -0.66
CCDC113-203ENST00000561517 FAM231CP0DMU5 169 aa10.93□□□□□ -0.66
CCDC113-203ENST00000561517 RAB2AP61019 212 aa10.93□□□□□ -0.66
CCDC113-203ENST00000561517 RANP62826 216 aaKnown RBP10.93□□□□□ -0.66
CCDC113-203ENST00000561517 TMEM78Q5T7P6 136 aa10.93□□□□□ -0.66
CCDC113-203ENST00000561517 PQLC2Q6ZP29 291 aa10.93□□□□□ -0.66
CCDC113-203ENST00000561517 CCDC28AQ8IWP9 274 aa10.93□□□□□ -0.66
CCDC113-203ENST00000561517 OR2G3Q8NGZ4 309 aa10.93□□□□□ -0.66
CCDC113-203ENST00000561517 Q9H3A6 140 aa10.93□□□□□ -0.66
CCDC113-203ENST00000561517 ZNF492Q9P255 531 aa10.93□□□□□ -0.66
CCDC113-203ENST00000561517 MUC4Q99102 2169 aa10.92□□□□□ -0.66
CCDC113-203ENST00000561517 TRBV7-9A0A0J9YWB2 115 aa10.92□□□□□ -0.66
CCDC113-203ENST00000561517 A0A1W2PPV4 95 aa10.92□□□□□ -0.66
CCDC113-203ENST00000561517 RBAKDNA6NC62 111 aa10.92□□□□□ -0.66
CCDC113-203ENST00000561517 CBY3A6NI87 242 aa10.92□□□□□ -0.66
CCDC113-203ENST00000561517 ZNF324O75467 553 aaPredicted RBP10.92□□□□□ -0.66
CCDC113-203ENST00000561517 ZFAND2AQ8N6M9 145 aa10.92□□□□□ -0.66
CCDC113-203ENST00000561517 LINC00612Q8N6U2 182 aa10.92□□□□□ -0.66
CCDC113-203ENST00000561517 POM121L12Q8N7R1 296 aa10.92□□□□□ -0.66
CCDC113-203ENST00000561517 HSD17B11Q8NBQ5 300 aa10.92□□□□□ -0.66
CCDC113-203ENST00000561517 LINC00467Q9BRT7 94 aa10.92□□□□□ -0.66
CCDC113-203ENST00000561517 PSMG3Q9BT73 122 aaPredicted RBP10.92□□□□□ -0.66
CCDC113-203ENST00000561517 NOP10Q9NPE3 64 aaKnown RBP10.92□□□□□ -0.66
CCDC113-203ENST00000561517 RNF222A6NCQ9 220 aa10.91□□□□□ -0.66
CCDC113-203ENST00000561517 EIF3GO75821 320 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCDC113-203ENST00000561517 CSN1S1P47710 185 aa10.91□□□□□ -0.66
CCDC113-203ENST00000561517 CD300CQ08708 224 aa10.91□□□□□ -0.66
CCDC113-203ENST00000561517 TMEM88Q6PEY1 159 aa10.91□□□□□ -0.66
CCDC113-203ENST00000561517 OR10G4Q8NGN3 311 aa10.91□□□□□ -0.66
CCDC113-203ENST00000561517 OR10G9Q8NGN4 311 aa10.91□□□□□ -0.66
CCDC113-203ENST00000561517 OR10G7Q8NGN6 311 aa10.91□□□□□ -0.66
CCDC113-203ENST00000561517 ATP5G1P05496 136 aa10.9□□□□□ -0.66
CCDC113-203ENST00000561517 GPX1P07203 203 aa10.9□□□□□ -0.66
CCDC113-203ENST00000561517 ATP6V0CP27449 155 aa10.9□□□□□ -0.66
CCDC113-203ENST00000561517 RNASE4P34096 147 aaKnown RBP10.9□□□□□ -0.66
CCDC113-203ENST00000561517 ATP5G3P48201 142 aa10.9□□□□□ -0.66
CCDC113-203ENST00000561517 ZNF138P52744 262 aa10.9□□□□□ -0.66
CCDC113-203ENST00000561517 SERF2P84101 59 aa10.9□□□□□ -0.66
CCDC113-203ENST00000561517 BTN1A1Q13410 526 aa10.9□□□□□ -0.66
CCDC113-203ENST00000561517 INO80EQ8NBZ0 244 aaPredicted RBP10.9□□□□□ -0.66
CCDC113-203ENST00000561517 OR2T35Q8NGX2 323 aa10.9□□□□□ -0.66
CCDC113-203ENST00000561517 RXFP4Q8TDU9 374 aa10.9□□□□□ -0.66
CCDC113-203ENST00000561517 OTORQ9NRC9 128 aa10.9□□□□□ -0.66
CCDC113-203ENST00000561517 TNFSF18Q9UNG2 199 aa10.9□□□□□ -0.66
CCDC113-203ENST00000561517 FXYD6-FXYD2A0A087WZ82 144 aa10.89□□□□□ -0.67
CCDC113-203ENST00000561517 DIRC3C9JPN6 131 aa10.89□□□□□ -0.67
CCDC113-203ENST00000561517 G3V3Q6 166 aa10.89□□□□□ -0.67
CCDC113-203ENST00000561517 DAZ2Q13117 558 aaKnown RBP10.89□□□□□ -0.67
CCDC113-203ENST00000561517 ANXA2RQ3ZCQ2 193 aa10.89□□□□□ -0.67
CCDC113-203ENST00000561517 PRR9Q5T870 116 aa10.89□□□□□ -0.67
CCDC113-203ENST00000561517 ARL6IP6Q8N6S5 226 aa10.89□□□□□ -0.67
CCDC113-203ENST00000561517 C15orf53Q8NAA6 179 aa10.89□□□□□ -0.67
CCDC113-203ENST00000561517 BIRC6Q9NR09 4857 aa10.89□□□□□ -0.67
CCDC113-203ENST00000561517 PGPA6NDG6 321 aa10.88□□□□□ -0.67
CCDC113-203ENST00000561517 SNURFLB1AK76 121 aa10.88□□□□□ -0.67
CCDC113-203ENST00000561517 F5H768 121 aa10.88□□□□□ -0.67
CCDC113-203ENST00000561517 STAG3L2P0CL84 134 aa10.88□□□□□ -0.67
CCDC113-203ENST00000561517 STAG3L3P0CL85 134 aa10.88□□□□□ -0.67
CCDC113-203ENST00000561517 CDC34P49427 236 aaPredicted RBP10.88□□□□□ -0.67
CCDC113-203ENST00000561517 EIF4E3Q8N5X7 224 aaKnown RBP10.88□□□□□ -0.67
CCDC113-203ENST00000561517 C11orf72Q8NBR9 251 aa10.88□□□□□ -0.67
CCDC113-203ENST00000561517 ZNF680Q8NEM1 530 aa10.88□□□□□ -0.67
CCDC113-203ENST00000561517 Q8TAT8 98 aa10.88□□□□□ -0.67
CCDC113-203ENST00000561517 LENEPQ9Y5L5 61 aa10.88□□□□□ -0.67
CCDC113-203ENST00000561517 DNAH10Q8IVF4 4471 aa10.88□□□□□ -0.67
CCDC113-203ENST00000561517 HMGB3O15347 200 aaKnown RBP10.87□□□□□ -0.67
CCDC113-203ENST00000561517 MBP02144 154 aa10.87□□□□□ -0.67
CCDC113-203ENST00000561517 ARL14EPLP0DKL9 152 aa10.87□□□□□ -0.67
CCDC113-203ENST00000561517 RNF212Q495C1 297 aa10.87□□□□□ -0.67
CCDC113-203ENST00000561517 FAM74A1Q5RGS3 127 aa10.87□□□□□ -0.67
CCDC113-203ENST00000561517 RPL7L1Q6DKI1 246 aaKnown RBP10.87□□□□□ -0.67
CCDC113-203ENST00000561517 SUN5Q8TC36 379 aa10.87□□□□□ -0.67
CCDC113-203ENST00000561517 TMED6Q8WW62 240 aa10.87□□□□□ -0.67
CCDC113-203ENST00000561517 RAB24Q969Q5 203 aa10.87□□□□□ -0.67
CCDC113-203ENST00000561517 SH3BGRL3Q9H299 93 aa10.87□□□□□ -0.67
CCDC113-203ENST00000561517 Q6ZQT7 251 aa10.86□□□□□ -0.67
CCDC113-203ENST00000561517 CMTM2Q8TAZ6 248 aa10.86□□□□□ -0.67
CCDC113-203ENST00000561517 GNPNAT1Q96EK6 184 aaPredicted RBP10.86□□□□□ -0.67
CCDC113-203ENST00000561517 HYLS1Q96M11 299 aa10.86□□□□□ -0.67
CCDC113-203ENST00000561517 GSN-AS1Q9NRJ2 163 aa10.86□□□□□ -0.67
CCDC113-203ENST00000561517 FRAS1Q86XX4 4008 aa10.85□□□□□ -0.67
CCDC113-203ENST00000561517 IGHV1OR15-1A0A075B7D0 117 aa10.85□□□□□ -0.67
CCDC113-203ENST00000561517 BORCS7-ASMTA0A0B4J1R7 106 aa10.85□□□□□ -0.67
CCDC113-203ENST00000561517 GAGE12BA1L429 117 aa10.85□□□□□ -0.67
CCDC113-203ENST00000561517 RGS13O14921 159 aa10.85□□□□□ -0.67
CCDC113-203ENST00000561517 GAGE7O76087 117 aa10.85□□□□□ -0.67
CCDC113-203ENST00000561517 GAGE12FP0CL80 117 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms