RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	OR5I1	Q13606	314 aa		5.69	□□□□□ -1.5
TPM1-231	ENST00000561395	ELOB	Q15370	118 aa		5.69	□□□□□ -1.5
TPM1-231	ENST00000561395	PSG3	Q16557	428 aa		5.69	□□□□□ -1.5
TPM1-231	ENST00000561395	DEFB136	Q30KP8	78 aa		5.69	□□□□□ -1.5
TPM1-231	ENST00000561395	KHDC1L	Q5JSQ8	128 aa		5.69	□□□□□ -1.5
TPM1-231	ENST00000561395	NHLRC2	Q8NBF2	726 aa		5.69	□□□□□ -1.5
TPM1-231	ENST00000561395	OR10G8	Q8NGN5	311 aa		5.69	□□□□□ -1.5
TPM1-231	ENST00000561395	MRPL53	Q96EL3	112 aa	Known RBP	5.69	□□□□□ -1.5
TPM1-231	ENST00000561395	MLST8	Q9BVC4	326 aa		5.69	□□□□□ -1.5
TPM1-231	ENST00000561395	RHPN1-AS1	Q9BWJ2	59 aa		5.69	□□□□□ -1.5
TPM1-231	ENST00000561395	URGCP-MRPS24	S4R325	110 aa		5.69	□□□□□ -1.5
TPM1-231	ENST00000561395	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	SOCS3	O14543	225 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	IGKV2D-40	P01614	121 aa	Predicted RBP	5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	PFN1	P07737	140 aa	Known RBP	5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	CD28	P10747	220 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	SLURP1	P55000	103 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	SYNJ2BP	P57105	145 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	FLI1	Q01543	452 aa	Predicted RBP	5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	KLF5	Q13887	457 aa	Predicted RBP	5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	IGFL4	Q6B9Z1	124 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	FAM231D	Q6ZW35	169 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	PRNT	Q86SH4	94 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	TMEM183A	Q8IXX5	376 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	FAM24B	Q8N5W8	94 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	RNF182	Q8N6D2	247 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	KLHL30-AS1	Q8NEE0	82 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	DPF1	Q92782	380 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	SGK494	Q96LW2	274 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	WWC2-AS2	Q96NR7	200 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	IMMP2L	Q96T52	175 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	GPR61	Q9BZJ8	451 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	RNASE7	Q9H1E1	156 aa	Known RBP	5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	OSTC	Q9NRP0	149 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	CLEC5A	Q9NY25	188 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	PSG8	Q9UQ74	426 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395		V9GYV3	84 aa		5.68	□□□□□ -1.5
TPM1-231	ENST00000561395	RBAKDN	A6NC62	111 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	FBLL1	A6NHQ2	334 aa	Known RBP	5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	C2orf70	A6NJV1	201 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	ZNF705F	A8MVS1	300 aa	Predicted RBP	5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	PRAC2	D3DTV9	90 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	CXCL1	P09341	107 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	PRB4	P10163	310 aa	Predicted RBP	5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	FOLR2	P14207	255 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	RAB5A	P20339	215 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	S100P	P25815	95 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	PROK1	P58294	105 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	ERVFC1-1	P60608	527 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	IBA57	Q5T440	356 aa	Known RBP	5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	SAMD13	Q5VXD3	122 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	LCN12	Q6JVE5	192 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	TCF24	Q7RTU0	167 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	OR11H1	Q8NG94	326 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	OR1N2	Q8NGR9	330 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	C16orf92	Q96LL3	132 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	NRN1	Q9NPD7	142 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	BIN3	Q9NQY0	253 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	ZNF492	Q9P255	531 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	ZFP30	Q9Y2G7	519 aa		5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	TSSC4	Q9Y5U2	329 aa	Predicted RBP	5.67	□□□□□ -1.5
TPM1-231	ENST00000561395	TRBV24-1	A0A075B6N3	115 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	TGIF2-C20orf24	A0A0A6YYL0	155 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	C19orf71	A6NCJ1	209 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	FHL3	Q13643	280 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	PRR27	Q6MZM9	219 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	KCNIP4	Q6PIL6	250 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	C11orf44	Q8N8P7	122 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	ZC2HC1A	Q96GY0	325 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	RAX2	Q96IS3	184 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	C20orf173	Q96LM9	149 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	VGLL1	Q99990	258 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	PYGO2	Q9BRQ0	406 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	IL36B	Q9NZH7	164 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	PEMT	Q9UBM1	199 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	MLX	Q9UH92	298 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	RYR2	Q92736	4967 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	DYNC2H1	Q8NCM8	4307 aa	Known RBP	5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	TENM2	Q9NT68	2774 aa		5.66	□□□□□ -1.5
TPM1-231	ENST00000561395	TRAV9-1	A0A075B6T8	112 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395		A0A1W2PPQ1	181 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395		A0A1W2PRX2	142 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	ZNF705G	A8MUZ8	300 aa	Predicted RBP	5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	GATC	O43716	136 aa	Known RBP	5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	CBLN1	P23435	193 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	FAM3B	P58499	235 aa	Predicted RBP	5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	RPL11	P62913	178 aa	Known RBP	5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	ERCC8	Q13216	396 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	ANKRD39	Q53RE8	183 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	CT83	Q5H943	113 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	ADAMTSL5	Q6ZMM2	481 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	LINC00322	Q6ZN03	302 aa	Predicted RBP	5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	COX8C	Q7Z4L0	72 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	GBGT1	Q8N5D6	347 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	ZNF738	Q8NE65	137 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	NUDT10	Q8NFP7	164 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	OR9G4	Q8NGQ1	327 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395		Q8TAT8	98 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	DCANP1	Q8TF63	244 aa		5.65	□□□□□ -1.5
TPM1-231	ENST00000561395	NUDT11	Q96G61	164 aa		5.65	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms