RNA–Protein interactions for RNA: ENST00000561024.1

PDE8A-214, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-214ENST00000561024 RPUSD1Q9UJJ7 312 aaKnown RBP3.77□□□□□ -1.81
PDE8A-214ENST00000561024 F11RQ9Y624 299 aaKnown RBP3.77□□□□□ -1.81
PDE8A-214ENST00000561024 ANKRD11Q6UB99 2663 aaPredicted RBP3.77□□□□□ -1.81
PDE8A-214ENST00000561024 EPG5Q9HCE0 2579 aa3.77□□□□□ -1.81
PDE8A-214ENST00000561024 URB1O60287 2271 aaKnown RBP3.76□□□□□ -1.81
PDE8A-214ENST00000561024 GAGE12HA6NDE8 117 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 D6R8Y8 96 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 OVOL3O00110 214 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 IGLV2-11P01706 119 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 CT45A10P0DMU9 189 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 LOXL1Q08397 574 aaPredicted RBP3.76□□□□□ -1.81
PDE8A-214ENST00000561024 C10orf55Q5SWW7 151 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 FAM201AQ5SY85 155 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 ZNF493Q6ZR52 646 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 ORMDL3Q8N138 153 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 BCL6BQ8N143 479 aaPredicted RBP3.76□□□□□ -1.81
PDE8A-214ENST00000561024 OR4C13Q8NGP0 309 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 IFI27L1Q96BM0 104 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 PRELID3AQ96N28 172 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 TRGV9Q99603 122 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 MRPL20Q9BYC9 149 aaKnown RBP3.76□□□□□ -1.81
PDE8A-214ENST00000561024 CACNA1BQ00975 2339 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 NBEAQ8NFP9 2946 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 IGHV1-18A0A0C4DH31 117 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 TRBV6-1A0A0K0K1D8 114 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 F8W1H4 67 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 SPRY3O43610 288 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 IGLV1-44P01699 117 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 C4orf26Q17RF5 130 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 SPRNQ5BIV9 151 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 PSMG4Q5JS54 123 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 Q8N1Y9 231 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 VKORC1Q9BQB6 163 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 HIGD1BQ9P298 99 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 HIGD1AQ9Y241 93 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 FAM208BQ5VWN6 2430 aa3.76□□□□□ -1.81
PDE8A-214ENST00000561024 IGHG3P01860 377 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 WT1P19544 449 aaPredicted RBP3.75□□□□□ -1.81
PDE8A-214ENST00000561024 FXYD2P54710 66 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 EXOC3-AS1Q8N2X6 119 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 DEFB108BQ8NET1 73 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 OR13C6PQ8NH95 151 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 CCL13Q99616 98 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 RNF7Q9UBF6 113 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 PRO0628Q9UI54 55 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 RALYQ9UKM9 306 aaKnown RBP3.75□□□□□ -1.81
PDE8A-214ENST00000561024 U3KQK5 164 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 A0A1W2PPI3 338 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 GHRHP01286 108 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 HOXB4P17483 251 aaPredicted RBP3.75□□□□□ -1.81
PDE8A-214ENST00000561024 GLRXP35754 106 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 DLX6P56179 175 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 FXYD7P58549 80 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 VMA21Q3ZAQ7 101 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 FAM104BQ5XKR9 115 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 HCP5Q6MZN7 132 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 FOXI2Q6ZQN5 318 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 ZNF788Q6ZQV5 615 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 AMN1Q8IY45 258 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 TMEM75Q8N9X5 138 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 PIFOQ8TCI5 191 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 TMEM190Q8WZ59 177 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 DNAJC30Q96LL9 226 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 C20orf173Q96LM9 149 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 SPATA25Q9BR10 227 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 CHAC1Q9BUX1 264 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 SPANXB1Q9NS25 103 aaPredicted RBP3.75□□□□□ -1.81
PDE8A-214ENST00000561024 TMEM14CQ9P0S9 112 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 DKK2Q9UBU2 259 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 CELSR3Q9NYQ7 3312 aa3.75□□□□□ -1.81
PDE8A-214ENST00000561024 B5MCH6 92 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 K7ERJ3 54 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 NDUFS7O75251 213 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 GATA3P23771 443 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 LYZP61626 148 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 MSMPQ1L6U9 139 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 RUSC1-AS1Q66K80 236 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 Q71RC1 249 aaPredicted RBP3.74□□□□□ -1.81
PDE8A-214ENST00000561024 FAM19A1Q7Z5A9 133 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 FAM216BQ8N7L0 139 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 TMEM178AQ8NBL3 297 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 GAFA1Q96PS6 74 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 SLC25A39Q9BZJ4 359 aaPredicted RBP3.74□□□□□ -1.81
PDE8A-214ENST00000561024 NHP2Q9NX24 153 aaKnown RBP3.74□□□□□ -1.81
PDE8A-214ENST00000561024 LINC00312Q9Y6C7 94 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 IGHV3-21A0A0B4J1V1 117 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 SHISA9B4DS77 424 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 H3BS24 57 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 IGLV2-23P01705 113 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 CKS2P33552 79 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 RPL13AP40429 203 aaKnown RBP3.74□□□□□ -1.81
PDE8A-214ENST00000561024 CRIP1P50238 77 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 PAX8Q06710 450 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 WFDC2Q14508 124 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 MRPL51Q4U2R6 128 aaKnown RBP3.74□□□□□ -1.81
PDE8A-214ENST00000561024 LYZL1Q6UWQ5 148 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 PHLDA1Q8WV24 401 aaPredicted RBP3.74□□□□□ -1.81
PDE8A-214ENST00000561024 TM2D2Q9BX73 214 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 ERG28Q9UKR5 140 aa3.74□□□□□ -1.81
PDE8A-214ENST00000561024 TRBV19A0A075B6N1 114 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms