RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 DEFB112Q30KQ8 113 aa4.35□□□□□ -1.71
HMG20A-212ENST00000560986 FAM106AQ4KMX7 169 aa4.35□□□□□ -1.71
HMG20A-212ENST00000560986 COA6Q5JTJ3 125 aaKnown RBP4.35□□□□□ -1.71
HMG20A-212ENST00000560986 IBA57Q5T440 356 aaKnown RBP4.35□□□□□ -1.71
HMG20A-212ENST00000560986 TOMM20LQ6UXN7 152 aa4.35□□□□□ -1.71
HMG20A-212ENST00000560986 BAGE2Q86Y30 109 aa4.35□□□□□ -1.71
HMG20A-212ENST00000560986 OR8I2Q8N0Y5 310 aa4.35□□□□□ -1.71
HMG20A-212ENST00000560986 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.35□□□□□ -1.71
HMG20A-212ENST00000560986 UBE2E2Q96LR5 201 aa4.35□□□□□ -1.71
HMG20A-212ENST00000560986 ZNF586Q9NXT0 402 aa4.35□□□□□ -1.71
HMG20A-212ENST00000560986 SPTAN1Q13813 2472 aaKnown RBP4.35□□□□□ -1.71
HMG20A-212ENST00000560986 DCHS2Q6V1P9 2916 aa4.35□□□□□ -1.71
HMG20A-212ENST00000560986 NAV3Q8IVL0 2385 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 NAV2Q8IVL1 2488 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 USP9YO00507 2555 aaPredicted RBP4.34□□□□□ -1.71
HMG20A-212ENST00000560986 TRAV5A0A0B4J249 113 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 LOC105371267A0A1B0GV96 52 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 SMIM27A0A1W2PRY6 76 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 A8MWP6 167 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 G3V318 75 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 IGLV2-8P01709 118 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 PRSS2P07478 247 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 APELAP0DMC3 54 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 RPS10P46783 165 aaKnown RBP4.34□□□□□ -1.71
HMG20A-212ENST00000560986 TPPP2P59282 170 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 PSG3Q16557 428 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 RPEL1Q2QD12 228 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 Q86TA4 180 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 TMEM219Q86XT9 240 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 CIARTQ8N365 385 aaPredicted RBP4.34□□□□□ -1.71
HMG20A-212ENST00000560986 Q8N9P0 234 aaPredicted RBP4.34□□□□□ -1.71
HMG20A-212ENST00000560986 TSKUQ8WUA8 353 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 PACRGQ96M98 296 aaPredicted RBP4.34□□□□□ -1.71
HMG20A-212ENST00000560986 NDFIP1Q9BT67 221 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 DERL1Q9BUN8 251 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 GNB1LQ9BYB4 327 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 ZNF331Q9NQX6 463 aaPredicted RBP4.34□□□□□ -1.71
HMG20A-212ENST00000560986 DAZ1Q9NQZ3 744 aaKnown RBP4.34□□□□□ -1.71
HMG20A-212ENST00000560986 UFC1Q9Y3C8 167 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 V9GYV3 84 aa4.34□□□□□ -1.71
HMG20A-212ENST00000560986 CREBBPQ92793 2442 aa4.34□□□□□ -1.72
HMG20A-212ENST00000560986 AKAP6Q13023 2319 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 TRAV2A0A0B4J234 112 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 C19orf71A6NCJ1 209 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 C5orf52A6NGY3 159 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 K7EN84 100 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 IGHV3-48P01763 117 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 IGHV4-59P01825 116 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 HLA-DQA1P01909 254 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 IGKV2-30P06310 120 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 CXCL1P09341 107 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 CT45A10P0DMU9 189 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 CDX1P47902 265 aaPredicted RBP4.33□□□□□ -1.72
HMG20A-212ENST00000560986 RPS20P60866 119 aaKnown RBP4.33□□□□□ -1.72
HMG20A-212ENST00000560986 KIAA0141Q14154 515 aaPredicted RBP4.33□□□□□ -1.72
HMG20A-212ENST00000560986 C9orf152Q5JTZ5 239 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 CLEC19AQ6UXS0 136 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 C9orf47Q6ZRZ4 202 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 C19orf35Q6ZS72 473 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 NRGNQ92686 78 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 PEF1Q9UBV8 284 aaKnown RBP4.33□□□□□ -1.72
HMG20A-212ENST00000560986 NAT8BQ9UHF3 227 aa4.33□□□□□ -1.72
HMG20A-212ENST00000560986 PTPN13Q12923 2485 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 ABCA2Q9BZC7 2435 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 IGHV3-21A0A0B4J1V1 117 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 A0A1W2PPQ1 181 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 CLPSL1A2RUU4 121 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 IZUMO1RA6ND01 250 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 PHOX2AO14813 284 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 GATCO43716 136 aaKnown RBP4.32□□□□□ -1.72
HMG20A-212ENST00000560986 IGLV2-11P01706 119 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 P01737 135 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 LGALS1P09382 135 aaKnown RBP4.32□□□□□ -1.72
HMG20A-212ENST00000560986 BLCAPP62952 87 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 ACTL10Q5JWF8 245 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 DNLZQ5SXM8 178 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 FAM162BQ5T6X4 162 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 BLNKQ8WV28 456 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 RPP21Q9H633 154 aaKnown RBP4.32□□□□□ -1.72
HMG20A-212ENST00000560986 URGCP-MRPS24S4R325 110 aa4.32□□□□□ -1.72
HMG20A-212ENST00000560986 ANKRD17O75179 2603 aaKnown RBP4.31□□□□□ -1.72
HMG20A-212ENST00000560986 SPG11Q96JI7 2443 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 FBN2P35556 2912 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 IGLV5-37A0A075B6J1 123 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 IGHV3OR16-10A0A075B7F0 116 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 TGIF2-C20orf24A0A0A6YYL0 155 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 IGHV7-4-1A0A0J9YVY3 117 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 ZNF320A2RRD8 509 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 ZNF705GA8MUZ8 300 aaPredicted RBP4.31□□□□□ -1.72
HMG20A-212ENST00000560986 OVOL1O14753 267 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 EIF3GO75821 320 aaKnown RBP eCLIP4.31□□□□□ -1.72
HMG20A-212ENST00000560986 MGST1P10620 155 aaKnown RBP4.31□□□□□ -1.72
HMG20A-212ENST00000560986 VPREB1P12018 145 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 UBE2V1Q13404 147 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 LY6EQ16553 131 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 RBPMS2Q6ZRY4 209 aaKnown RBP4.31□□□□□ -1.72
HMG20A-212ENST00000560986 GBGT1Q8N5D6 347 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 GATD1Q8NB37 220 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 OR4X2Q8NGF9 303 aa4.31□□□□□ -1.72
HMG20A-212ENST00000560986 ZNF418Q8TF45 676 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms