RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 RNF212Q495C1 297 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 MZT2BQ6NZ67 158 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 Q6ZTI0 123 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 STX12Q86Y82 276 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 TMEM256Q8N2U0 113 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 C11orf72Q8NBR9 251 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 OR1L4Q8NGR5 311 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 ENKURQ8TC29 256 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 S100ZQ8WXG8 99 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 PHYHIPLQ96FC7 376 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 TMEM14CQ9P0S9 112 aa7.78□□□□□ -1.16
GABPB1-210ENST00000560825 TIMM8BQ9Y5J9 83 aaPredicted RBP7.78□□□□□ -1.16
GABPB1-210ENST00000560825 INMT-MINDY4F8WBC2 141 aa7.77□□□□□ -1.17
GABPB1-210ENST00000560825 ATP5G1P05496 136 aa7.77□□□□□ -1.17
GABPB1-210ENST00000560825 ATP5G3P48201 142 aa7.77□□□□□ -1.17
GABPB1-210ENST00000560825 RAB31Q13636 194 aa7.77□□□□□ -1.17
GABPB1-210ENST00000560825 FAM122CQ6P4D5 195 aa7.77□□□□□ -1.17
GABPB1-210ENST00000560825 LINC00299Q6ZSB3 139 aa7.77□□□□□ -1.17
GABPB1-210ENST00000560825 Q8TAT8 98 aa7.77□□□□□ -1.17
GABPB1-210ENST00000560825 FXYD5Q96DB9 178 aa7.77□□□□□ -1.17
GABPB1-210ENST00000560825 PFDN5Q99471 154 aa7.77□□□□□ -1.17
GABPB1-210ENST00000560825 KRTAP4-5Q9BYR2 181 aa7.77□□□□□ -1.17
GABPB1-210ENST00000560825 NMES1Q9C002 83 aa7.77□□□□□ -1.17
GABPB1-210ENST00000560825 TMPRSS5Q9H3S3 457 aa7.77□□□□□ -1.17
GABPB1-210ENST00000560825 WFDC1Q9HC57 220 aa7.77□□□□□ -1.17
GABPB1-210ENST00000560825 TRAV26-1A0A087WT03 109 aa7.76□□□□□ -1.17
GABPB1-210ENST00000560825 KLLNB2CW77 178 aa7.76□□□□□ -1.17
GABPB1-210ENST00000560825 HIST1H1EP10412 219 aaKnown RBP7.76□□□□□ -1.17
GABPB1-210ENST00000560825 HBG1P69891 147 aa7.76□□□□□ -1.17
GABPB1-210ENST00000560825 HBG2P69892 147 aa7.76□□□□□ -1.17
GABPB1-210ENST00000560825 TNP2Q05952 138 aa7.76□□□□□ -1.17
GABPB1-210ENST00000560825 ICAM4Q14773 271 aa7.76□□□□□ -1.17
GABPB1-210ENST00000560825 LINC00336Q6ZUF6 198 aa7.76□□□□□ -1.17
GABPB1-210ENST00000560825 ZFAND2AQ8N6M9 145 aa7.76□□□□□ -1.17
GABPB1-210ENST00000560825 PPP1R1CQ8WVI7 109 aa7.76□□□□□ -1.17
GABPB1-210ENST00000560825 MARVELD1Q9BSK0 173 aa7.76□□□□□ -1.17
GABPB1-210ENST00000560825 SMIM3Q9BZL3 60 aa7.76□□□□□ -1.17
GABPB1-210ENST00000560825 WDR61Q9GZS3 305 aaKnown RBP7.76□□□□□ -1.17
GABPB1-210ENST00000560825 GSN-AS1Q9NRJ2 163 aa7.76□□□□□ -1.17
GABPB1-210ENST00000560825 PTTG2Q9NZH5 202 aa7.76□□□□□ -1.17
GABPB1-210ENST00000560825 KLF12Q9Y4X4 402 aa7.76□□□□□ -1.17
GABPB1-210ENST00000560825 E5RGE8 158 aa7.75□□□□□ -1.17
GABPB1-210ENST00000560825 ZNF253O75346 499 aa7.75□□□□□ -1.17
GABPB1-210ENST00000560825 RNASE4P34096 147 aaKnown RBP7.75□□□□□ -1.17
GABPB1-210ENST00000560825 OR5I1Q13606 314 aa7.75□□□□□ -1.17
GABPB1-210ENST00000560825 GUK1Q16774 197 aa7.75□□□□□ -1.17
GABPB1-210ENST00000560825 ATP6V1FQ16864 119 aa7.75□□□□□ -1.17
GABPB1-210ENST00000560825 S100A7AQ86SG5 101 aa7.75□□□□□ -1.17
GABPB1-210ENST00000560825 C15orf53Q8NAA6 179 aa7.75□□□□□ -1.17
GABPB1-210ENST00000560825 VSIG2Q96IQ7 327 aa7.75□□□□□ -1.17
GABPB1-210ENST00000560825 MUC4Q99102 2169 aa7.74□□□□□ -1.17
GABPB1-210ENST00000560825 C7orf71A4D174 169 aa7.74□□□□□ -1.17
GABPB1-210ENST00000560825 MPC2O95563 127 aa7.74□□□□□ -1.17
GABPB1-210ENST00000560825 LEPP41159 167 aa7.74□□□□□ -1.17
GABPB1-210ENST00000560825 ESRGQ1W209 222 aa7.74□□□□□ -1.17
GABPB1-210ENST00000560825 ZNF493Q6ZR52 646 aa7.74□□□□□ -1.17
GABPB1-210ENST00000560825 SSX7Q7RTT5 188 aa7.74□□□□□ -1.17
GABPB1-210ENST00000560825 ODF3Q96PU9 254 aa7.74□□□□□ -1.17
GABPB1-210ENST00000560825 TIMM9Q9Y5J7 89 aa7.74□□□□□ -1.17
GABPB1-210ENST00000560825 NBDYA0A0U1RRE5 68 aa7.73□□□□□ -1.17
GABPB1-210ENST00000560825 MPDU1O75352 247 aa7.73□□□□□ -1.17
GABPB1-210ENST00000560825 NBEAP1P0C6P0 100 aa7.73□□□□□ -1.17
GABPB1-210ENST00000560825 C9orf47Q6ZRZ4 202 aa7.73□□□□□ -1.17
GABPB1-210ENST00000560825 C20orf144Q9BQM9 153 aa7.73□□□□□ -1.17
GABPB1-210ENST00000560825 ATG101Q9BSB4 218 aa7.73□□□□□ -1.17
GABPB1-210ENST00000560825 OR51M1Q9H341 326 aa7.73□□□□□ -1.17
GABPB1-210ENST00000560825 MBD2Q9UBB5 411 aa7.73□□□□□ -1.17
GABPB1-210ENST00000560825 HSPB11Q9Y547 144 aa7.73□□□□□ -1.17
GABPB1-210ENST00000560825 SLC25A5P05141 298 aaKnown RBP7.72□□□□□ -1.17
GABPB1-210ENST00000560825 CRISP2P16562 243 aa7.72□□□□□ -1.17
GABPB1-210ENST00000560825 C1orf134Q5TEV5 83 aa7.72□□□□□ -1.17
GABPB1-210ENST00000560825 MRPL53Q96EL3 112 aaKnown RBP7.72□□□□□ -1.17
GABPB1-210ENST00000560825 PAXXQ9BUH6 204 aa7.72□□□□□ -1.17
GABPB1-210ENST00000560825 ZNF492Q9P255 531 aa7.72□□□□□ -1.17
GABPB1-210ENST00000560825 RNF24Q9Y225 148 aa7.72□□□□□ -1.17
GABPB1-210ENST00000560825 FUT9Q9Y231 359 aa7.72□□□□□ -1.17
GABPB1-210ENST00000560825 PRAF2O60831 178 aa7.71□□□□□ -1.17
GABPB1-210ENST00000560825 RLN2P04090 185 aa7.71□□□□□ -1.17
GABPB1-210ENST00000560825 RANP62826 216 aaKnown RBP7.71□□□□□ -1.17
GABPB1-210ENST00000560825 DAZ2Q13117 558 aaKnown RBP7.71□□□□□ -1.17
GABPB1-210ENST00000560825 PDE6HQ13956 83 aa7.71□□□□□ -1.17
GABPB1-210ENST00000560825 Q5BKY6 102 aa7.71□□□□□ -1.17
GABPB1-210ENST00000560825 FFAR4Q5NUL3 377 aa7.71□□□□□ -1.17
GABPB1-210ENST00000560825 Q8N3U1 123 aa7.71□□□□□ -1.17
GABPB1-210ENST00000560825 GNPNAT1Q96EK6 184 aaPredicted RBP7.71□□□□□ -1.17
GABPB1-210ENST00000560825 ATP5SQ99766 215 aa7.71□□□□□ -1.17
GABPB1-210ENST00000560825 PYGO2Q9BRQ0 406 aa7.71□□□□□ -1.17
GABPB1-210ENST00000560825 SLC25A31Q9H0C2 315 aa7.71□□□□□ -1.17
GABPB1-210ENST00000560825 MRPL16Q9NX20 251 aaKnown RBP7.71□□□□□ -1.17
GABPB1-210ENST00000560825 A0A096LPF7 62 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 TRGV1A0A0A0MS02 117 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 SNURFLB1AK76 121 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 HMGB3O15347 200 aaKnown RBP7.7□□□□□ -1.18
GABPB1-210ENST00000560825 SSNA1O43805 119 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 OR7C2O60412 319 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 SPINK4O60575 86 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 IGHV3-53P01767 116 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 GPX1P07203 203 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 M6PRP20645 277 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 RPL12P30050 165 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms