RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 TBX15Q96SF7 602 aa3.33□□□□□ -1.88
TMOD3-207ENST00000560549 MAP1LC3CQ9BXW4 147 aa3.33□□□□□ -1.88
TMOD3-207ENST00000560549 KCNIP2Q9NS61 270 aa3.33□□□□□ -1.88
TMOD3-207ENST00000560549 DPM3Q9P2X0 92 aa3.33□□□□□ -1.88
TMOD3-207ENST00000560549 FUT9Q9Y231 359 aa3.33□□□□□ -1.88
TMOD3-207ENST00000560549 ROS1P08922 2347 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 PLCE1Q9P212 2302 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 TCRBV4S1A1TA0A5B7 111 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 F6UZH7 168 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 CLDN34H7C241 214 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 I3L2K1 104 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 K7EN84 100 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 MT-CO2P00403 227 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 MOSP00540 346 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 SNRPCP09234 159 aaKnown RBP3.32□□□□□ -1.88
TMOD3-207ENST00000560549 OR10J4P0C629 311 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 PYYP10082 97 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 HTR1DP28221 377 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 RPL35P42766 123 aaKnown RBP3.32□□□□□ -1.88
TMOD3-207ENST00000560549 RPS10P46783 165 aaKnown RBP3.32□□□□□ -1.88
TMOD3-207ENST00000560549 RAB31Q13636 194 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 KLF17Q5JT82 389 aaPredicted RBP3.32□□□□□ -1.88
TMOD3-207ENST00000560549 LINC01551Q86U37 167 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 PPP1R27Q86WC6 154 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 Q8N6K4 173 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 NPBQ8NG41 125 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 OR4X1Q8NH49 305 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 SRSF12Q8WXF0 261 aaKnown RBP3.32□□□□□ -1.88
TMOD3-207ENST00000560549 FAM210BQ96KR6 192 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 RNF5Q99942 180 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 PYGO2Q9BRQ0 406 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 FAM103A1Q9BTL3 118 aaKnown RBP3.32□□□□□ -1.88
TMOD3-207ENST00000560549 BIN3Q9NQY0 253 aa3.32□□□□□ -1.88
TMOD3-207ENST00000560549 AMMECR1Q9Y4X0 333 aaPredicted RBP3.32□□□□□ -1.88
TMOD3-207ENST00000560549 SOX21Q9Y651 276 aaPredicted RBP3.32□□□□□ -1.88
TMOD3-207ENST00000560549 FLNAP21333 2647 aaKnown RBP3.31□□□□□ -1.88
TMOD3-207ENST00000560549 IGHV4-4A0A075B6R2 117 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 TRBV7-9A0A0J9YWB2 115 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 GGTLC3B5MD39 225 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 K7EIM0 57 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 PDE6DO43924 150 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 NDUFA3O95167 84 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 IGLV2-8P01709 118 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 TRGC2P03986 189 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 C8orf88P0DMB2 117 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 PMCHP20382 165 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 CRYBB3P26998 211 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 SUB1P53999 127 aaKnown RBP eCLIP3.31□□□□□ -1.883e-7■■■□□ 18.9
TMOD3-207ENST00000560549 RAB5BP61020 215 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 NDPQ00604 133 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 FXYD3Q14802 87 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 MMDQ15546 238 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 OR1P1Q8NH06 330 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 FRZBQ92765 325 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 C11orf52Q96A22 123 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 FXYD5Q96DB9 178 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 ZNF414Q96IQ9 312 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 LINC00479Q96M42 142 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 RNF2Q99496 336 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 TRGV9Q99603 122 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 BPESC1Q9GZL8 116 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 ESM1Q9NQ30 184 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 TNFRSF19Q9NS68 423 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 ZNF355PQ9NSJ1 428 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 TMEM242Q9NWH2 141 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 CLEC5AQ9NY25 188 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 F11RQ9Y624 299 aaKnown RBP3.31□□□□□ -1.88
TMOD3-207ENST00000560549 S4R3C0 116 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 MED13LQ71F56 2210 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 DCHS2Q6V1P9 2916 aa3.31□□□□□ -1.88
TMOD3-207ENST00000560549 MALRD1Q5VYJ5 2156 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 YLPM1P49750 1951 aaKnown RBP3.3□□□□□ -1.88
TMOD3-207ENST00000560549 TRBV24-1A0A075B6N3 115 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 IGHV3OR16-10A0A075B7F0 116 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 H7BYZ3 331 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 SLC17A3O00476 420 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 COX7A2P2O60397 106 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 OR7C2O60412 319 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 HIST1H2BKO60814 126 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 GGCTO75223 188 aaKnown RBP3.3□□□□□ -1.88
TMOD3-207ENST00000560549 IGKV1-17P01599 117 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 HIST1H2BJP06899 126 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 TRGC1P0CF51 173 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 IGLC1P0CG04 106 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 PRB4P10163 310 aaPredicted RBP3.3□□□□□ -1.88
TMOD3-207ENST00000560549 ORM2P19652 201 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 HIST1H2BOP23527 126 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 HIST1H2BBP33778 126 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 MYCNOSP40205 109 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 GALR1P47211 349 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 NDUFA6P56556 154 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 HIST1H2BDP58876 126 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 HIST1H2BCP62807 126 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 GNG5P63218 68 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 FABP9Q0Z7S8 132 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 OR5I1Q13606 314 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 EBI3Q14213 229 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 HIST2H2BEQ16778 126 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 C5orf64Q2M2E5 130 aa3.3□□□□□ -1.88
TMOD3-207ENST00000560549 RPEL1Q2QD12 228 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms