RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 RNASE8Q8TDE3 154 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-210ENST00000560383 C16orf74Q96GX8 76 aa10.76□□□□□ -0.69
SNRPA1-210ENST00000560383 PSMG3Q9BT73 122 aaPredicted RBP10.76□□□□□ -0.69
SNRPA1-210ENST00000560383 PKHD1P08F94 4074 aa10.75□□□□□ -0.69
SNRPA1-210ENST00000560383 DNAH2Q9P225 4427 aa10.75□□□□□ -0.69
SNRPA1-210ENST00000560383 RNF222A6NCQ9 220 aa10.75□□□□□ -0.69
SNRPA1-210ENST00000560383 KLLNB2CW77 178 aa10.75□□□□□ -0.69
SNRPA1-210ENST00000560383 G3V3Q6 166 aa10.75□□□□□ -0.69
SNRPA1-210ENST00000560383 SLC25A5P05141 298 aaKnown RBP10.75□□□□□ -0.69
SNRPA1-210ENST00000560383 NMBP08949 121 aa10.75□□□□□ -0.69
SNRPA1-210ENST00000560383 P0DMU3 169 aa10.75□□□□□ -0.69
SNRPA1-210ENST00000560383 FAM231AP0DMU4 169 aa10.75□□□□□ -0.69
SNRPA1-210ENST00000560383 FAM231CP0DMU5 169 aa10.75□□□□□ -0.69
SNRPA1-210ENST00000560383 UBE2L3P68036 154 aaKnown RBP10.75□□□□□ -0.69
SNRPA1-210ENST00000560383 ERCC8Q13216 396 aa10.75□□□□□ -0.69
SNRPA1-210ENST00000560383 TMEM263Q8WUH6 116 aaKnown RBP10.75□□□□□ -0.69
SNRPA1-210ENST00000560383 NDUFAF3Q9BU61 184 aa10.75□□□□□ -0.69
SNRPA1-210ENST00000560383 TRBV7-9A0A0J9YWB2 115 aa10.74□□□□□ -0.69
SNRPA1-210ENST00000560383 RAB2AP61019 212 aa10.74□□□□□ -0.69
SNRPA1-210ENST00000560383 DAD1P61803 113 aa10.74□□□□□ -0.69
SNRPA1-210ENST00000560383 RANP62826 216 aaKnown RBP10.74□□□□□ -0.69
SNRPA1-210ENST00000560383 FAM122CQ6P4D5 195 aa10.74□□□□□ -0.69
SNRPA1-210ENST00000560383 PQLC2Q6ZP29 291 aa10.74□□□□□ -0.69
SNRPA1-210ENST00000560383 OR2T35Q8NGX2 323 aa10.74□□□□□ -0.69
SNRPA1-210ENST00000560383 TNFSF18Q9UNG2 199 aa10.74□□□□□ -0.69
SNRPA1-210ENST00000560383 IGKV2-40A0A087WW87 121 aaPredicted RBP10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 TRAV12-3A0A0B4J271 114 aa10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 A0A1W2PPV4 95 aa10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 ZNF324O75467 553 aaPredicted RBP10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 IGKV2D-40P01614 121 aaPredicted RBP10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 ATP6V0CP27449 155 aa10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 SERF2P84101 59 aa10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 LINC00336Q6ZUF6 198 aa10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 HSD17B11Q8NBQ5 300 aa10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 INO80EQ8NBZ0 244 aaPredicted RBP10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 OR10G4Q8NGN3 311 aa10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 OR10G9Q8NGN4 311 aa10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 OR10G7Q8NGN6 311 aa10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 VGLL1Q99990 258 aa10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 PYGO2Q9BRQ0 406 aa10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 LINC00467Q9BRT7 94 aa10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 Q9H3A6 140 aa10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 ZNF492Q9P255 531 aa10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 TIMM8BQ9Y5J9 83 aaPredicted RBP10.73□□□□□ -0.69
SNRPA1-210ENST00000560383 C7orf71A4D174 169 aa10.72□□□□□ -0.69
SNRPA1-210ENST00000560383 RBAKDNA6NC62 111 aa10.72□□□□□ -0.69
SNRPA1-210ENST00000560383 EIF3GO75821 320 aaKnown RBP eCLIP10.72□□□□□ -0.69
SNRPA1-210ENST00000560383 HTN1P15515 57 aa10.72□□□□□ -0.69
SNRPA1-210ENST00000560383 TMEM78Q5T7P6 136 aa10.72□□□□□ -0.69
SNRPA1-210ENST00000560383 ZFAND2AQ8N6M9 145 aa10.72□□□□□ -0.69
SNRPA1-210ENST00000560383 LINC00612Q8N6U2 182 aa10.72□□□□□ -0.69
SNRPA1-210ENST00000560383 POM121L12Q8N7R1 296 aa10.72□□□□□ -0.69
SNRPA1-210ENST00000560383 DNAH17Q9UFH2 4485 aa10.72□□□□□ -0.69
SNRPA1-210ENST00000560383 FXYD6-FXYD2A0A087WZ82 144 aa10.71□□□□□ -0.69
SNRPA1-210ENST00000560383 J3KRW8 73 aa10.71□□□□□ -0.69
SNRPA1-210ENST00000560383 MBP02144 154 aa10.71□□□□□ -0.69
SNRPA1-210ENST00000560383 STAG3L2P0CL84 134 aa10.71□□□□□ -0.69
SNRPA1-210ENST00000560383 STAG3L3P0CL85 134 aa10.71□□□□□ -0.69
SNRPA1-210ENST00000560383 CSN1S1P47710 185 aa10.71□□□□□ -0.69
SNRPA1-210ENST00000560383 ZNF138P52744 262 aa10.71□□□□□ -0.69
SNRPA1-210ENST00000560383 CD300CQ08708 224 aa10.71□□□□□ -0.69
SNRPA1-210ENST00000560383 CCDC28AQ8IWP9 274 aa10.71□□□□□ -0.69
SNRPA1-210ENST00000560383 ARL6IP6Q8N6S5 226 aa10.71□□□□□ -0.69
SNRPA1-210ENST00000560383 RXFP4Q8TDU9 374 aa10.71□□□□□ -0.69
SNRPA1-210ENST00000560383 OTORQ9NRC9 128 aa10.71□□□□□ -0.69
SNRPA1-210ENST00000560383 CBY3A6NI87 242 aa10.7□□□□□ -0.7
SNRPA1-210ENST00000560383 DIRC3C9JPN6 131 aa10.7□□□□□ -0.7
SNRPA1-210ENST00000560383 DEFB130BP0DP73 79 aa10.7□□□□□ -0.7
SNRPA1-210ENST00000560383 DEFB130AP0DP74 79 aa10.7□□□□□ -0.7
SNRPA1-210ENST00000560383 CDC34P49427 236 aaPredicted RBP10.7□□□□□ -0.7
SNRPA1-210ENST00000560383 RPL7L1Q6DKI1 246 aaKnown RBP10.7□□□□□ -0.7
SNRPA1-210ENST00000560383 SUN5Q8TC36 379 aa10.7□□□□□ -0.7
SNRPA1-210ENST00000560383 GNPNAT1Q96EK6 184 aaPredicted RBP10.7□□□□□ -0.7
SNRPA1-210ENST00000560383 KIAA1109Q2LD37 5005 aa10.7□□□□□ -0.7
SNRPA1-210ENST00000560383 GPX1P07203 203 aa10.69□□□□□ -0.7
SNRPA1-210ENST00000560383 HTN3P15516 51 aa10.69□□□□□ -0.7
SNRPA1-210ENST00000560383 BTN1A1Q13410 526 aa10.69□□□□□ -0.7
SNRPA1-210ENST00000560383 ANXA2RQ3ZCQ2 193 aa10.69□□□□□ -0.7
SNRPA1-210ENST00000560383 PRR9Q5T870 116 aa10.69□□□□□ -0.7
SNRPA1-210ENST00000560383 TMED6Q8WW62 240 aa10.69□□□□□ -0.7
SNRPA1-210ENST00000560383 RAB24Q969Q5 203 aa10.69□□□□□ -0.7
SNRPA1-210ENST00000560383 SH3BGRL3Q9H299 93 aa10.69□□□□□ -0.7
SNRPA1-210ENST00000560383 NOP10Q9NPE3 64 aaKnown RBP10.69□□□□□ -0.7
SNRPA1-210ENST00000560383 LENEPQ9Y5L5 61 aa10.69□□□□□ -0.7
SNRPA1-210ENST00000560383 PCLOQ9Y6V0 5065 aa10.69□□□□□ -0.7
SNRPA1-210ENST00000560383 BORCS7-ASMTA0A0B4J1R7 106 aa10.68□□□□□ -0.7
SNRPA1-210ENST00000560383 ATP5G1P05496 136 aa10.68□□□□□ -0.7
SNRPA1-210ENST00000560383 ARL14EPLP0DKL9 152 aa10.68□□□□□ -0.7
SNRPA1-210ENST00000560383 RNASE4P34096 147 aaKnown RBP10.68□□□□□ -0.7
SNRPA1-210ENST00000560383 ATP5G3P48201 142 aa10.68□□□□□ -0.7
SNRPA1-210ENST00000560383 DAZ2Q13117 558 aaKnown RBP10.68□□□□□ -0.7
SNRPA1-210ENST00000560383 FAM74A1Q5RGS3 127 aa10.68□□□□□ -0.7
SNRPA1-210ENST00000560383 TMEM88Q6PEY1 159 aa10.68□□□□□ -0.7
SNRPA1-210ENST00000560383 Q8TAT8 98 aa10.68□□□□□ -0.7
SNRPA1-210ENST00000560383 PGPA6NDG6 321 aa10.67□□□□□ -0.7
SNRPA1-210ENST00000560383 TAAR5O14804 337 aa10.67□□□□□ -0.7
SNRPA1-210ENST00000560383 HMGB3O15347 200 aaKnown RBP10.67□□□□□ -0.7
SNRPA1-210ENST00000560383 EIF4E3Q8N5X7 224 aaKnown RBP10.67□□□□□ -0.7
SNRPA1-210ENST00000560383 C11orf72Q8NBR9 251 aa10.67□□□□□ -0.7
SNRPA1-210ENST00000560383 ZNF680Q8NEM1 530 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms