RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, human

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF9-208	ENST00000560311	PSG3	Q16557	428 aa		4.65	□□□□□ -1.67
IRF9-208	ENST00000560311	ATP6V1F	Q16864	119 aa		4.65	□□□□□ -1.67
IRF9-208	ENST00000560311	C12orf74	Q32Q52	190 aa		4.65	□□□□□ -1.67
IRF9-208	ENST00000560311	GCSAML	Q5JQS6	135 aa		4.65	□□□□□ -1.67
IRF9-208	ENST00000560311	PPP1R1C	Q8WVI7	109 aa		4.65	□□□□□ -1.67
IRF9-208	ENST00000560311	ATP5S	Q99766	215 aa		4.65	□□□□□ -1.67
IRF9-208	ENST00000560311	SPX	Q9BT56	116 aa		4.65	□□□□□ -1.67
IRF9-208	ENST00000560311	TMEM208	Q9BTX3	173 aa		4.65	□□□□□ -1.67
IRF9-208	ENST00000560311	SLC25A31	Q9H0C2	315 aa		4.65	□□□□□ -1.67
IRF9-208	ENST00000560311	DNAJC4	Q9NNZ3	241 aa		4.65	□□□□□ -1.67
IRF9-208	ENST00000560311	KCNIP2	Q9NS61	270 aa		4.65	□□□□□ -1.67
IRF9-208	ENST00000560311	MBD2	Q9UBB5	411 aa		4.65	□□□□□ -1.67
IRF9-208	ENST00000560311	IGHV4-4	A0A075B6R2	117 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	DEFB131B	A0A096LNP1	70 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	PRAC2	D3DTV9	90 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311		H3BQ15	152 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	MPC2	O95563	127 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	PTTG1	O95997	202 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	SPART-AS1	P0CW21	52 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	PYY	P10082	97 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	TCTA	P57738	103 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	SST	P61278	116 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	RHOB	P62745	196 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	CYCS	P99999	105 aa	Known RBP	4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	NHLH2	Q02577	135 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	GUK1	Q16774	197 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	RRN3P1	Q2M238	152 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	FAM222A	Q5U5X8	452 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	LGALS9C	Q6DKI2	356 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	RPP25L	Q8N5L8	163 aa	Known RBP	4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	RNF126	Q9BV68	326 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	SLC25A2	Q9BXI2	301 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	WDR61	Q9GZS3	305 aa	Known RBP	4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	ZNF586	Q9NXT0	402 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	TMEM14C	Q9P0S9	112 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	DKK2	Q9UBU2	259 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	APLN	Q9ULZ1	77 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	HSPB11	Q9Y547	144 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	ALG5	Q9Y673	324 aa		4.64	□□□□□ -1.67
IRF9-208	ENST00000560311	HERC2	O95714	4834 aa		4.63	□□□□□ -1.67
IRF9-208	ENST00000560311	TRBV19	A0A075B6N1	114 aa		4.63	□□□□□ -1.67
IRF9-208	ENST00000560311	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.63	□□□□□ -1.67
IRF9-208	ENST00000560311	CIDEA	O60543	219 aa		4.63	□□□□□ -1.67
IRF9-208	ENST00000560311	ZNF253	O75346	499 aa		4.63	□□□□□ -1.67
IRF9-208	ENST00000560311	CDKN1B	P46527	198 aa		4.63	□□□□□ -1.67
IRF9-208	ENST00000560311	GFI1B	Q5VTD9	330 aa		4.63	□□□□□ -1.67
IRF9-208	ENST00000560311	MIR17HG	Q75NE6	70 aa		4.63	□□□□□ -1.67
IRF9-208	ENST00000560311	OR10J6P	Q8NGY7	276 aa		4.63	□□□□□ -1.67
IRF9-208	ENST00000560311	MRPL53	Q96EL3	112 aa	Known RBP	4.63	□□□□□ -1.67
IRF9-208	ENST00000560311	SAT2	Q96F10	170 aa	Predicted RBP	4.63	□□□□□ -1.67
IRF9-208	ENST00000560311	NIPSNAP3B	Q9BS92	247 aa		4.63	□□□□□ -1.67
IRF9-208	ENST00000560311	MRPL32	Q9BYC8	188 aa	Known RBP	4.63	□□□□□ -1.67
IRF9-208	ENST00000560311	SMIM3	Q9BZL3	60 aa		4.63	□□□□□ -1.67
IRF9-208	ENST00000560311	PLAC8L1	A1L4L8	177 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	C17orf112	F2Z3M2	114 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311		M0R3E3	92 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	NDUFB4	O95168	129 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	PRM2	P04554	102 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	HIST1H1E	P10412	219 aa	Known RBP	4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	HTN3	P15516	51 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	RPL12	P30050	165 aa	Known RBP	4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	LEP	P41159	167 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	TAS2R60	P59551	318 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	DAD1	P61803	113 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	PDE6H	Q13956	83 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	COTL1	Q14019	142 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	TMEM256	Q8N2U0	113 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	BLNK	Q8WV28	456 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	C16orf74	Q96GX8	76 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	FAM167A-AS1	Q96KT0	104 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	ODF3	Q96PU9	254 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	LINC01587	Q99440	93 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	NDUFAF3	Q9BU61	184 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	FUT9	Q9Y231	359 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	TIMM9	Q9Y5J7	89 aa		4.62	□□□□□ -1.67
IRF9-208	ENST00000560311	PKD1	P98161	4303 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	XKRY2	A2RUG3	117 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	LYRM9	A8MSI8	78 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311		H7BYZ3	331 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	OR7C2	O60412	319 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	IFNA5	P01569	189 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	IGKV2D-40	P01614	121 aa	Predicted RBP	4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	CT45A10	P0DMU9	189 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	AZU1	P20160	251 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	TSPO	P30536	169 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	UBE2L3	P68036	154 aa	Known RBP	4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	OXA1L	Q15070	435 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	FCN2	Q15485	313 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	KHDC3L	Q587J8	217 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	FFAR4	Q5NUL3	377 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	EXOC3-AS1	Q8N2X6	119 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	RNASE8	Q8TDE3	154 aa	Known RBP	4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	TMEM263	Q8WUH6	116 aa	Known RBP	4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	FXYD5	Q96DB9	178 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	PHYHIPL	Q96FC7	376 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	C20orf144	Q9BQM9	153 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	PAXX	Q9BUH6	204 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms