RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 NOP10Q9NPE3 64 aaKnown RBP8.23□□□□□ -1.09
RABGGTA-216ENST00000560243 KLLNB2CW77 178 aa8.22□□□□□ -1.09
RABGGTA-216ENST00000560243 HMGB3O15347 200 aaKnown RBP8.22□□□□□ -1.09
RABGGTA-216ENST00000560243 RNASE4P34096 147 aaKnown RBP8.22□□□□□ -1.09
RABGGTA-216ENST00000560243 BTN1A1Q13410 526 aa8.22□□□□□ -1.09
RABGGTA-216ENST00000560243 PRR9Q5T870 116 aa8.22□□□□□ -1.09
RABGGTA-216ENST00000560243 TMEM88Q6PEY1 159 aa8.22□□□□□ -1.09
RABGGTA-216ENST00000560243 HSD17B11Q8NBQ5 300 aa8.22□□□□□ -1.09
RABGGTA-216ENST00000560243 Q8TAT8 98 aa8.22□□□□□ -1.09
RABGGTA-216ENST00000560243 TMEM263Q8WUH6 116 aaKnown RBP8.22□□□□□ -1.09
RABGGTA-216ENST00000560243 C16orf74Q96GX8 76 aa8.22□□□□□ -1.09
RABGGTA-216ENST00000560243 LINC00477Q96M19 166 aa8.22□□□□□ -1.09
RABGGTA-216ENST00000560243 Q9H3A6 140 aa8.22□□□□□ -1.09
RABGGTA-216ENST00000560243 C7orf71A4D174 169 aa8.21□□□□□ -1.1
RABGGTA-216ENST00000560243 G3V3Q6 166 aa8.21□□□□□ -1.1
RABGGTA-216ENST00000560243 SLC25A5P05141 298 aaKnown RBP8.21□□□□□ -1.1
RABGGTA-216ENST00000560243 M6PRP20645 277 aa8.21□□□□□ -1.1
RABGGTA-216ENST00000560243 ACOT6Q3I5F7 207 aaPredicted RBP8.21□□□□□ -1.1
RABGGTA-216ENST00000560243 KHDC3LQ587J8 217 aa8.21□□□□□ -1.1
RABGGTA-216ENST00000560243 ZNF493Q6ZR52 646 aa8.21□□□□□ -1.1
RABGGTA-216ENST00000560243 ZFAND2AQ8N6M9 145 aa8.21□□□□□ -1.1
RABGGTA-216ENST00000560243 SH3BGRL3Q9H299 93 aa8.21□□□□□ -1.1
RABGGTA-216ENST00000560243 TIMM8BQ9Y5J9 83 aaPredicted RBP8.21□□□□□ -1.1
RABGGTA-216ENST00000560243 FXYD6-FXYD2A0A087WZ82 144 aa8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 RNF222A6NCQ9 220 aa8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 ZNF324O75467 553 aaPredicted RBP8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 CRISP2P16562 243 aa8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 ATP6V0CP27449 155 aa8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 TAS2R45P59539 299 aa8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 TMEM78Q5T7P6 136 aa8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 CCDC28AQ8IWP9 274 aa8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 OR10G4Q8NGN3 311 aa8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 OR10G9Q8NGN4 311 aa8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 OR10G7Q8NGN6 311 aa8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 OR2T35Q8NGX2 323 aa8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 FAM210BQ96KR6 192 aa8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 HYLS1Q96M11 299 aa8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 ZNF492Q9P255 531 aa8.2□□□□□ -1.1
RABGGTA-216ENST00000560243 NACAE9PAV3 2078 aa8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 A0A1W2PPV4 95 aa8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 CBY3A6NI87 242 aa8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 F5H768 121 aa8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 GPX1P07203 203 aa8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 P0DMU3 169 aa8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 FAM231AP0DMU4 169 aa8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 FAM231CP0DMU5 169 aa8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 ZNF138P52744 262 aa8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 ZNF266Q14584 549 aa8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 RPL7L1Q6DKI1 246 aaKnown RBP8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 LYPD1Q8N2G4 141 aa8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 POM121L12Q8N7R1 296 aa8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 PYGO2Q9BRQ0 406 aa8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 TNFSF18Q9UNG2 199 aa8.19□□□□□ -1.1
RABGGTA-216ENST00000560243 DNAH2Q9P225 4427 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 GAGE12BA1L429 117 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 PGPA6NDG6 321 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 DIRC3C9JPN6 131 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 GAGE7O76087 117 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 ATP5G1P05496 136 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 GAGE12FP0CL80 117 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 GAGE12GP0CL81 117 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 GAGE12IP0CL82 117 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 ARL14EPLP0DKL9 152 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 CSN1S1P47710 185 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 ATP5G3P48201 142 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 LINC00612Q8N6U2 182 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 C11orf72Q8NBR9 251 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 INO80EQ8NBZ0 244 aaPredicted RBP8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 OR2G3Q8NGZ4 309 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 ASB13Q8WXK3 278 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 PSMG3Q9BT73 122 aaPredicted RBP8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 GSN-AS1Q9NRJ2 163 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 TP53TG3Q9ULZ0 132 aa8.18□□□□□ -1.1
RABGGTA-216ENST00000560243 RBAKDNA6NC62 111 aa8.17□□□□□ -1.1
RABGGTA-216ENST00000560243 SNURFLB1AK76 121 aa8.17□□□□□ -1.1
RABGGTA-216ENST00000560243 SMLR1H3BR10 107 aa8.17□□□□□ -1.1
RABGGTA-216ENST00000560243 NMBP08949 121 aa8.17□□□□□ -1.1
RABGGTA-216ENST00000560243 CDC34P49427 236 aaPredicted RBP8.17□□□□□ -1.1
RABGGTA-216ENST00000560243 PQLC2Q6ZP29 291 aa8.17□□□□□ -1.1
RABGGTA-216ENST00000560243 Q6ZTI0 123 aa8.17□□□□□ -1.1
RABGGTA-216ENST00000560243 SSX7Q7RTT5 188 aa8.17□□□□□ -1.1
RABGGTA-216ENST00000560243 RAB24Q969Q5 203 aa8.17□□□□□ -1.1
RABGGTA-216ENST00000560243 OTORQ9NRC9 128 aa8.17□□□□□ -1.1
RABGGTA-216ENST00000560243 RPH3ALQ9UNE2 315 aa8.17□□□□□ -1.1
RABGGTA-216ENST00000560243 HECTD4Q9Y4D8 3996 aa8.17□□□□□ -1.1
RABGGTA-216ENST00000560243 M0R2N4 97 aa8.16□□□□□ -1.1
RABGGTA-216ENST00000560243 STAG3L2P0CL84 134 aa8.16□□□□□ -1.1
RABGGTA-216ENST00000560243 STAG3L3P0CL85 134 aa8.16□□□□□ -1.1
RABGGTA-216ENST00000560243 HOXA5P20719 270 aa8.16□□□□□ -1.1
RABGGTA-216ENST00000560243 GNG5P63218 68 aa8.16□□□□□ -1.1
RABGGTA-216ENST00000560243 DAZ2Q13117 558 aaKnown RBP8.16□□□□□ -1.1
RABGGTA-216ENST00000560243 GOLT1AQ6ZVE7 132 aa8.16□□□□□ -1.1
RABGGTA-216ENST00000560243 UBE2DNLQ8IWF7 75 aa8.16□□□□□ -1.1
RABGGTA-216ENST00000560243 EIF4E3Q8N5X7 224 aaKnown RBP8.16□□□□□ -1.1
RABGGTA-216ENST00000560243 LINC00467Q9BRT7 94 aa8.16□□□□□ -1.1
RABGGTA-216ENST00000560243 KLF12Q9Y4X4 402 aa8.16□□□□□ -1.1
RABGGTA-216ENST00000560243 FAT2Q9NYQ8 4349 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 IGLV2-18A0A075B6J9 118 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 TRAV8-1A0A0A6YYK1 113 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 RGS13O14921 159 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms