RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 SSX7Q7RTT5 188 aa16.65■□□□□ 0.26
CRNDE-209ENST00000560208 IQCF2Q8IXL9 164 aa16.65■□□□□ 0.26
CRNDE-209ENST00000560208 IGHV4-4A0A075B6R2 117 aa16.64■□□□□ 0.25
CRNDE-209ENST00000560208 TRAV12-2A0A075B6T6 113 aa16.64■□□□□ 0.25
CRNDE-209ENST00000560208 DEFB131BA0A096LNP1 70 aa16.64■□□□□ 0.25
CRNDE-209ENST00000560208 ERCC8Q13216 396 aa16.64■□□□□ 0.25
CRNDE-209ENST00000560208 BAP18Q8IXM2 172 aa16.64■□□□□ 0.25
CRNDE-209ENST00000560208 IGKV2-40A0A087WW87 121 aaPredicted RBP16.63■□□□□ 0.25
CRNDE-209ENST00000560208 TMEM189A5PLL7 270 aa16.63■□□□□ 0.25
CRNDE-209ENST00000560208 IGKV2D-40P01614 121 aaPredicted RBP16.63■□□□□ 0.25
CRNDE-209ENST00000560208 EMP1P54849 157 aa16.63■□□□□ 0.25
CRNDE-209ENST00000560208 ZNF726P1Q15940 193 aa16.63■□□□□ 0.25
CRNDE-209ENST00000560208 LGALSLQ3ZCW2 172 aaPredicted RBP16.63■□□□□ 0.25
CRNDE-209ENST00000560208 HYLS1Q96M11 299 aa16.63■□□□□ 0.25
CRNDE-209ENST00000560208 GOLT1BQ9Y3E0 138 aa16.63■□□□□ 0.25
CRNDE-209ENST00000560208 INSP01308 110 aa16.62■□□□□ 0.25
CRNDE-209ENST00000560208 AMBPP02760 352 aa16.62■□□□□ 0.25
CRNDE-209ENST00000560208 GCHFRP30047 84 aa16.62■□□□□ 0.25
CRNDE-209ENST00000560208 IGF2BP2-AS1Q96M15 143 aa16.62■□□□□ 0.25
CRNDE-209ENST00000560208 RPH3ALQ9UNE2 315 aa16.62■□□□□ 0.25
CRNDE-209ENST00000560208 CTXND1A0A1B0GTU2 59 aa16.61■□□□□ 0.25
CRNDE-209ENST00000560208 NPIPB6E9PJ23 425 aa16.61■□□□□ 0.25
CRNDE-209ENST00000560208 J3KRW8 73 aa16.61■□□□□ 0.25
CRNDE-209ENST00000560208 CXorf1O96002 111 aa16.61■□□□□ 0.25
CRNDE-209ENST00000560208 SPART-AS1P0CW21 52 aa16.61■□□□□ 0.25
CRNDE-209ENST00000560208 CSN1S1P47710 185 aa16.61■□□□□ 0.25
CRNDE-209ENST00000560208 EIF5AP63241 154 aaKnown RBP16.61■□□□□ 0.25
CRNDE-209ENST00000560208 C1orf158Q8N1D5 194 aa16.61■□□□□ 0.25
CRNDE-209ENST00000560208 LYPD1Q8N2G4 141 aa16.61■□□□□ 0.25
CRNDE-209ENST00000560208 TMEM208Q9BTX3 173 aa16.61■□□□□ 0.25
CRNDE-209ENST00000560208 PGPA6NDG6 321 aa16.6■□□□□ 0.25
CRNDE-209ENST00000560208 CRXO43186 299 aaPredicted RBP16.6■□□□□ 0.25
CRNDE-209ENST00000560208 CT45A10P0DMU9 189 aa16.6■□□□□ 0.25
CRNDE-209ENST00000560208 TPT1P13693 172 aaKnown RBP16.6■□□□□ 0.25
CRNDE-209ENST00000560208 HBE1P02100 147 aa16.59■□□□□ 0.25
CRNDE-209ENST00000560208 SEC11BP0C7V7 166 aa16.59■□□□□ 0.25
CRNDE-209ENST00000560208 CDKN1BP46527 198 aa16.59■□□□□ 0.25
CRNDE-209ENST00000560208 FGF8P55075 233 aaPredicted RBP16.59■□□□□ 0.25
CRNDE-209ENST00000560208 ZFP69Q49AA0 526 aa16.59■□□□□ 0.25
CRNDE-209ENST00000560208 CMTM2Q8TAZ6 248 aa16.59■□□□□ 0.25
CRNDE-209ENST00000560208 OTORQ9NRC9 128 aa16.59■□□□□ 0.25
CRNDE-209ENST00000560208 PLA2G2EQ9NZK7 142 aa16.59■□□□□ 0.25
CRNDE-209ENST00000560208 TSPOP30536 169 aa16.58■□□□□ 0.24
CRNDE-209ENST00000560208 KIR3DS1Q14943 382 aa16.58■□□□□ 0.24
CRNDE-209ENST00000560208 FAM74A1Q5RGS3 127 aa16.58■□□□□ 0.24
CRNDE-209ENST00000560208 VGLL1Q99990 258 aa16.58■□□□□ 0.24
CRNDE-209ENST00000560208 AGPAT4-IT1Q9H0P7 198 aa16.58■□□□□ 0.24
CRNDE-209ENST00000560208 TMEM167BQ9NRX6 74 aa16.58■□□□□ 0.24
CRNDE-209ENST00000560208 DKK2Q9UBU2 259 aa16.58■□□□□ 0.24
CRNDE-209ENST00000560208 LEPP41159 167 aa16.57■□□□□ 0.24
CRNDE-209ENST00000560208 FHITP49789 147 aa16.57■□□□□ 0.24
CRNDE-209ENST00000560208 TMED6Q8WW62 240 aa16.57■□□□□ 0.24
CRNDE-209ENST00000560208 TMPRSS5Q9H3S3 457 aa16.57■□□□□ 0.24
CRNDE-209ENST00000560208 TEX48A0A1B0GUV7 120 aa16.56■□□□□ 0.24
CRNDE-209ENST00000560208 LOC102723971A0A1B0GUV8 181 aa16.56■□□□□ 0.24
CRNDE-209ENST00000560208 MAP1LC3B2A6NCE7 125 aa16.56■□□□□ 0.24
CRNDE-209ENST00000560208 RRN3P1Q2M238 152 aa16.56■□□□□ 0.24
CRNDE-209ENST00000560208 TMEM78Q5T7P6 136 aa16.56■□□□□ 0.24
CRNDE-209ENST00000560208 FAM222AQ5U5X8 452 aa16.56■□□□□ 0.24
CRNDE-209ENST00000560208 FAM213BQ8TBF2 198 aa16.56■□□□□ 0.24
CRNDE-209ENST00000560208 RXFP4Q8TDU9 374 aa16.56■□□□□ 0.24
CRNDE-209ENST00000560208 LINC00477Q96M19 166 aa16.56■□□□□ 0.24
CRNDE-209ENST00000560208 NDUFAF3Q9BU61 184 aa16.56■□□□□ 0.24
CRNDE-209ENST00000560208 MAP1LC3BQ9GZQ8 125 aa16.56■□□□□ 0.24
CRNDE-209ENST00000560208 DIRC3C9JPN6 131 aa16.55■□□□□ 0.24
CRNDE-209ENST00000560208 SLC25A5P05141 298 aaKnown RBP16.55■□□□□ 0.24
CRNDE-209ENST00000560208 GNG5P63218 68 aa16.55■□□□□ 0.24
CRNDE-209ENST00000560208 STOML3Q8TAV4 291 aa16.55■□□□□ 0.24
CRNDE-209ENST00000560208 LINC01587Q99440 93 aa16.55■□□□□ 0.24
CRNDE-209ENST00000560208 NIPSNAP3BQ9BS92 247 aa16.55■□□□□ 0.24
CRNDE-209ENST00000560208 GFI1BQ5VTD9 330 aa16.54■□□□□ 0.24
CRNDE-209ENST00000560208 C9orf47Q6ZRZ4 202 aa16.54■□□□□ 0.24
CRNDE-209ENST00000560208 C9orf62Q8N4C0 152 aa16.54■□□□□ 0.24
CRNDE-209ENST00000560208 Q8TAT8 98 aa16.54■□□□□ 0.24
CRNDE-209ENST00000560208 SUN5Q8TC36 379 aa16.54■□□□□ 0.24
CRNDE-209ENST00000560208 ODF3Q96PU9 254 aa16.54■□□□□ 0.24
CRNDE-209ENST00000560208 YTHDF2Q9Y5A9 579 aaKnown RBP16.54■□□□□ 0.24
CRNDE-209ENST00000560208 ZNF705GA8MUZ8 300 aaPredicted RBP16.53■□□□□ 0.24
CRNDE-209ENST00000560208 UMAD1C9J7I0 102 aa16.53■□□□□ 0.24
CRNDE-209ENST00000560208 PRM2P04554 102 aa16.53■□□□□ 0.24
CRNDE-209ENST00000560208 UBE2G2P60604 165 aa16.53■□□□□ 0.24
CRNDE-209ENST00000560208 GOLT1AQ6ZVE7 132 aa16.53■□□□□ 0.24
CRNDE-209ENST00000560208 A0A1B0GV50 99 aa16.52■□□□□ 0.24
CRNDE-209ENST00000560208 HTN1P15515 57 aa16.52■□□□□ 0.24
CRNDE-209ENST00000560208 NKX2-5P52952 324 aaPredicted RBP16.52■□□□□ 0.24
CRNDE-209ENST00000560208 TRAV12-3A0A0B4J271 114 aa16.51■□□□□ 0.23
CRNDE-209ENST00000560208 RBAKDNA6NC62 111 aa16.51■□□□□ 0.23
CRNDE-209ENST00000560208 P0DMU3 169 aa16.51■□□□□ 0.23
CRNDE-209ENST00000560208 FAM231AP0DMU4 169 aa16.51■□□□□ 0.23
CRNDE-209ENST00000560208 FAM231CP0DMU5 169 aa16.51■□□□□ 0.23
CRNDE-209ENST00000560208 ZNF138P52744 262 aa16.51■□□□□ 0.23
CRNDE-209ENST00000560208 SUMO1P63165 101 aaKnown RBP16.51■□□□□ 0.23
CRNDE-209ENST00000560208 SLC51BQ86UW2 128 aa16.51■□□□□ 0.23
CRNDE-209ENST00000560208 SFT2D1Q8WV19 159 aa16.51■□□□□ 0.23
CRNDE-209ENST00000560208 ZNF492Q9P255 531 aa16.51■□□□□ 0.23
CRNDE-209ENST00000560208 GGTLC3B5MD39 225 aa16.5■□□□□ 0.23
CRNDE-209ENST00000560208 RNASE4P34096 147 aaKnown RBP16.5■□□□□ 0.23
CRNDE-209ENST00000560208 BTN1A1Q13410 526 aa16.5■□□□□ 0.23
CRNDE-209ENST00000560208 FAM19A4Q96LR4 140 aa16.5■□□□□ 0.23
CRNDE-209ENST00000560208 GPX1P07203 203 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms