RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 A0A096LPF7 62 aa12.93□□□□□ -0.34
CDC42BPB-206ENST00000559790 C7orf71A4D174 169 aa12.93□□□□□ -0.34
CDC42BPB-206ENST00000559790 RLN2P04090 185 aa12.93□□□□□ -0.34
CDC42BPB-206ENST00000559790 FGF7P21781 194 aa12.93□□□□□ -0.34
CDC42BPB-206ENST00000559790 S100A10P60903 97 aa12.93□□□□□ -0.34
CDC42BPB-206ENST00000559790 BAXQ07812 192 aa12.93□□□□□ -0.34
CDC42BPB-206ENST00000559790 CLINT1Q14677 625 aa12.93□□□□□ -0.34
CDC42BPB-206ENST00000559790 Q6ZRG5 221 aa12.93□□□□□ -0.34
CDC42BPB-206ENST00000559790 Q6ZRN7 208 aaPredicted RBP12.93□□□□□ -0.34
CDC42BPB-206ENST00000559790 EXOC3-AS1Q8N2X6 119 aa12.93□□□□□ -0.34
CDC42BPB-206ENST00000559790 GSN-AS1Q9NRJ2 163 aa12.93□□□□□ -0.34
CDC42BPB-206ENST00000559790 SLC25A5P05141 298 aaKnown RBP12.92□□□□□ -0.34
CDC42BPB-206ENST00000559790 CRISP2P16562 243 aa12.92□□□□□ -0.34
CDC42BPB-206ENST00000559790 NPCDR1Q9BY65 106 aa12.92□□□□□ -0.34
CDC42BPB-206ENST00000559790 IGKV2-40A0A087WW87 121 aaPredicted RBP12.91□□□□□ -0.34
CDC42BPB-206ENST00000559790 SNURFLB1AK76 121 aa12.91□□□□□ -0.34
CDC42BPB-206ENST00000559790 IGKV2D-40P01614 121 aaPredicted RBP12.91□□□□□ -0.34
CDC42BPB-206ENST00000559790 H2AFB2P0C5Z0 115 aa12.91□□□□□ -0.34
CDC42BPB-206ENST00000559790 HIST1H1EP10412 219 aaKnown RBP12.91□□□□□ -0.34
CDC42BPB-206ENST00000559790 S100A11P31949 105 aa12.91□□□□□ -0.34
CDC42BPB-206ENST00000559790 RAB31Q13636 194 aa12.91□□□□□ -0.34
CDC42BPB-206ENST00000559790 PDE6HQ13956 83 aa12.91□□□□□ -0.34
CDC42BPB-206ENST00000559790 CCDC28AQ8IWP9 274 aa12.91□□□□□ -0.34
CDC42BPB-206ENST00000559790 TP53TG3Q9ULZ0 132 aa12.91□□□□□ -0.34
CDC42BPB-206ENST00000559790 KLF12Q9Y4X4 402 aa12.91□□□□□ -0.34
CDC42BPB-206ENST00000559790 ANXA2RQ3ZCQ2 193 aa12.9□□□□□ -0.34
CDC42BPB-206ENST00000559790 C9orf47Q6ZRZ4 202 aa12.9□□□□□ -0.34
CDC42BPB-206ENST00000559790 MIR17HGQ75NE6 70 aa12.9□□□□□ -0.34
CDC42BPB-206ENST00000559790 SPATA12Q7Z6I5 190 aa12.9□□□□□ -0.34
CDC42BPB-206ENST00000559790 VGLL1Q99990 258 aa12.9□□□□□ -0.34
CDC42BPB-206ENST00000559790 CCDC32Q9BV29 185 aa12.9□□□□□ -0.34
CDC42BPB-206ENST00000559790 H0YIZ8 118 aa12.89□□□□□ -0.35
CDC42BPB-206ENST00000559790 SPINK4O60575 86 aa12.89□□□□□ -0.35
CDC42BPB-206ENST00000559790 TCL1AP56279 114 aa12.89□□□□□ -0.35
CDC42BPB-206ENST00000559790 NHLH2Q02577 135 aa12.89□□□□□ -0.35
CDC42BPB-206ENST00000559790 THAP6Q8TBB0 222 aa12.89□□□□□ -0.35
CDC42BPB-206ENST00000559790 GPN1Q9HCN4 374 aaPredicted RBP12.89□□□□□ -0.35
CDC42BPB-206ENST00000559790 PVALBP20472 110 aaPredicted RBP12.88□□□□□ -0.35
CDC42BPB-206ENST00000559790 HBG1P69891 147 aa12.88□□□□□ -0.35
CDC42BPB-206ENST00000559790 HBG2P69892 147 aa12.88□□□□□ -0.35
CDC42BPB-206ENST00000559790 TTC32Q5I0X7 151 aa12.88□□□□□ -0.35
CDC42BPB-206ENST00000559790 STX12Q86Y82 276 aa12.88□□□□□ -0.35
CDC42BPB-206ENST00000559790 FXYD5Q96DB9 178 aa12.88□□□□□ -0.35
CDC42BPB-206ENST00000559790 PHYHIPLQ96FC7 376 aa12.88□□□□□ -0.35
CDC42BPB-206ENST00000559790 OR5AC2Q9NZP5 309 aa12.88□□□□□ -0.35
CDC42BPB-206ENST00000559790 PRELID1Q9Y255 219 aa12.88□□□□□ -0.35
CDC42BPB-206ENST00000559790 A0A1W2PPQ1 181 aa12.87□□□□□ -0.35
CDC42BPB-206ENST00000559790 SIX6O95475 246 aa12.87□□□□□ -0.35
CDC42BPB-206ENST00000559790 BTF3P20290 206 aaKnown RBP12.87□□□□□ -0.35
CDC42BPB-206ENST00000559790 ASAH1Q13510 395 aa12.87□□□□□ -0.35
CDC42BPB-206ENST00000559790 ICAM4Q14773 271 aa12.87□□□□□ -0.35
CDC42BPB-206ENST00000559790 EIF4E3Q8N5X7 224 aaKnown RBP12.87□□□□□ -0.35
CDC42BPB-206ENST00000559790 MAPKAPK5-AS1Q8N8E1 139 aa12.87□□□□□ -0.35
CDC42BPB-206ENST00000559790 ZNF680Q8NEM1 530 aa12.87□□□□□ -0.35
CDC42BPB-206ENST00000559790 BLNKQ8WV28 456 aa12.87□□□□□ -0.35
CDC42BPB-206ENST00000559790 LINC00477Q96M19 166 aa12.87□□□□□ -0.35
CDC42BPB-206ENST00000559790 FUT9Q9Y231 359 aa12.87□□□□□ -0.35
CDC42BPB-206ENST00000559790 MPDU1O75352 247 aa12.86□□□□□ -0.35
CDC42BPB-206ENST00000559790 RNASE4P34096 147 aaKnown RBP12.86□□□□□ -0.35
CDC42BPB-206ENST00000559790 LINC00315P59091 139 aa12.86□□□□□ -0.35
CDC42BPB-206ENST00000559790 ATP6V1FQ16864 119 aa12.86□□□□□ -0.35
CDC42BPB-206ENST00000559790 OR5C1Q8NGR4 320 aa12.86□□□□□ -0.35
CDC42BPB-206ENST00000559790 Q8TAT8 98 aa12.86□□□□□ -0.35
CDC42BPB-206ENST00000559790 TRGV1A0A0A0MS02 117 aa12.85□□□□□ -0.35
CDC42BPB-206ENST00000559790 NMBP08949 121 aa12.85□□□□□ -0.35
CDC42BPB-206ENST00000559790 IFITM3Q01628 133 aa12.85□□□□□ -0.35
CDC42BPB-206ENST00000559790 IBA57Q5T440 356 aaKnown RBP12.85□□□□□ -0.35
CDC42BPB-206ENST00000559790 FAM122CQ6P4D5 195 aa12.85□□□□□ -0.35
CDC42BPB-206ENST00000559790 MRPL16Q9NX20 251 aaKnown RBP12.85□□□□□ -0.35
CDC42BPB-206ENST00000559790 ZNF492Q9P255 531 aa12.85□□□□□ -0.35
CDC42BPB-206ENST00000559790 FAM240BA0A1B0GVZ2 78 aa12.84□□□□□ -0.35
CDC42BPB-206ENST00000559790 Q8N1X5 172 aa12.84□□□□□ -0.35
CDC42BPB-206ENST00000559790 ST6GAL2Q96JF0 529 aa12.84□□□□□ -0.35
CDC42BPB-206ENST00000559790 TIMM9Q9Y5J7 89 aa12.84□□□□□ -0.35
CDC42BPB-206ENST00000559790 TRGV2A0A075B6R0 118 aa12.83□□□□□ -0.36
CDC42BPB-206ENST00000559790 OR10J4P0C629 311 aa12.83□□□□□ -0.36
CDC42BPB-206ENST00000559790 NBEAP1P0C6P0 100 aa12.83□□□□□ -0.36
CDC42BPB-206ENST00000559790 WDR61Q9GZS3 305 aaKnown RBP12.83□□□□□ -0.36
CDC42BPB-206ENST00000559790 H2BFSP57053 126 aa12.82□□□□□ -0.36
CDC42BPB-206ENST00000559790 FHL2Q14192 279 aa12.82□□□□□ -0.36
CDC42BPB-206ENST00000559790 IGHV1OR15-1A0A075B7D0 117 aa12.81□□□□□ -0.36
CDC42BPB-206ENST00000559790 IGHV3-53P01767 116 aa12.81□□□□□ -0.36
CDC42BPB-206ENST00000559790 GPX1P07203 203 aa12.81□□□□□ -0.36
CDC42BPB-206ENST00000559790 FUSP35637 526 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDC42BPB-206ENST00000559790 MRPL32Q9BYC8 188 aaKnown RBP12.81□□□□□ -0.36
CDC42BPB-206ENST00000559790 NMES1Q9C002 83 aa12.81□□□□□ -0.36
CDC42BPB-206ENST00000559790 OR51M1Q9H341 326 aa12.81□□□□□ -0.36
CDC42BPB-206ENST00000559790 AAMDCQ9H7C9 122 aa12.81□□□□□ -0.36
CDC42BPB-206ENST00000559790 NDUFA13Q9P0J0 144 aa12.81□□□□□ -0.36
CDC42BPB-206ENST00000559790 NXPH4O95158 308 aa12.8□□□□□ -0.36
CDC42BPB-206ENST00000559790 ZNF138P52744 262 aa12.8□□□□□ -0.36
CDC42BPB-206ENST00000559790 CRYBA4P53673 196 aa12.8□□□□□ -0.36
CDC42BPB-206ENST00000559790 LINC00299Q6ZSB3 139 aa12.8□□□□□ -0.36
CDC42BPB-206ENST00000559790 TNFRSF18Q9Y5U5 241 aa12.8□□□□□ -0.36
CDC42BPB-206ENST00000559790 FAT1Q14517 4588 aa12.79□□□□□ -0.36
CDC42BPB-206ENST00000559790 TRBV7-9A0A0J9YWB2 115 aa12.79□□□□□ -0.36
CDC42BPB-206ENST00000559790 E5RGE8 158 aa12.79□□□□□ -0.36
CDC42BPB-206ENST00000559790 EIF3GO75821 320 aaKnown RBP eCLIP12.79□□□□□ -0.36
CDC42BPB-206ENST00000559790 ZNF266Q14584 549 aa12.79□□□□□ -0.36
CDC42BPB-206ENST00000559790 LRRC37A5PQ49AS3 106 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms