RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 CBLN2Q8IUK8 224 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 OR4X1Q8NH49 305 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 RXFP4Q8TDU9 374 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 TMEM170AQ8WVE7 144 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 GRAMD2BQ96HH9 432 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 BTF3L4Q96K17 158 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 TCEAL7Q9BRU2 100 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 SLC39A9Q9NUM3 307 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 CLEC5AQ9NY25 188 aa4.16□□□□□ -1.74
USP3-215ENST00000559771 MAP1LC3B2A6NCE7 125 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 CEBPZOSA8MTT3 80 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 H3BP45 60 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 H3BQ15 152 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 NXPH3O95157 252 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 S100A8P05109 93 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 ZNF688P0C7X2 276 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 IAPPP10997 89 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 RAB5AP20339 215 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 NPPCP23582 126 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 OPRK1P41145 380 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 PAFAH1B2P68402 229 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 CCL20P78556 96 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 ERHP84090 104 aaKnown RBP4.15□□□□□ -1.75
USP3-215ENST00000559771 ARL16Q0P5N6 197 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 TIGITQ495A1 244 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 LCE1AQ5T7P2 110 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 C16orf54Q6UWD8 224 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 STHQ8IWL8 128 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 GLMPQ8WWB7 406 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 HIST1H2BAQ96A08 127 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 ZNF503Q96F45 646 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 NPCDR1Q9BY65 106 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 MAP1LC3BQ9GZQ8 125 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 RABAC1Q9UI14 185 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 WDR83OSQ9Y284 106 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 ARL2-SNX15V9GYD0 113 aa4.15□□□□□ -1.75
USP3-215ENST00000559771 TRAV10A0A0B4J240 114 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 UBE2L5PA0A1B0GUS4 154 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 PDE6DO43924 150 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 AMBPP02760 352 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 S100A6P06703 90 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 IGLC1P0CG04 106 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 FGF7P21781 194 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 RND2P52198 227 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 DEFB1P60022 68 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 S100A12P80511 92 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 MEF2BQ02080 365 aaPredicted RBP4.14□□□□□ -1.75
USP3-215ENST00000559771 ODF1Q14990 250 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 USF2Q15853 346 aaPredicted RBP4.14□□□□□ -1.75
USP3-215ENST00000559771 ACTL10Q5JWF8 245 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 OR8G2PQ6IF36 304 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 MORN3Q6PF18 240 aaPredicted RBP4.14□□□□□ -1.75
USP3-215ENST00000559771 CYB561D1Q8N8Q1 229 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 STXBP6Q8NFX7 210 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 OR10G9Q8NGN4 311 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 OR10G7Q8NGN6 311 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 YPEL4Q96NS1 127 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 RSG1Q9BU20 258 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 NPVFQ9HCQ7 196 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 ENY2Q9NPA8 101 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 GNG13Q9P2W3 67 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 NAT8Q9UHE5 227 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 HSPG2P98160 4391 aa4.14□□□□□ -1.75
USP3-215ENST00000559771 TRBV24-1A0A075B6N3 115 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 DEFB131BA0A096LNP1 70 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 A0A1W2PS18 150 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 C5orf52A6NGY3 159 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 ZNF705FA8MVS1 300 aaPredicted RBP4.13□□□□□ -1.75
USP3-215ENST00000559771 F6UZH7 168 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 H3BMM0 161 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 CORTO00230 105 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 HMGB3O15347 200 aaKnown RBP4.13□□□□□ -1.75
USP3-215ENST00000559771 BUB3O43684 328 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 IFNA10P01566 189 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 ZNF705DP0CH99 300 aaPredicted RBP4.13□□□□□ -1.75
USP3-215ENST00000559771 ZNF705BP0CI00 300 aaPredicted RBP4.13□□□□□ -1.75
USP3-215ENST00000559771 RPL29P47914 159 aaKnown RBP4.13□□□□□ -1.75
USP3-215ENST00000559771 YPEL3P61236 119 aaPredicted RBP4.13□□□□□ -1.75
USP3-215ENST00000559771 ZNF726P1Q15940 193 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 TMEM241Q24JQ0 296 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 C2orf83Q53S99 150 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 CT83Q5H943 113 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 PSMG4Q5JS54 123 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 FFAR4Q5NUL3 377 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 GDF5OSQ5U4N7 250 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 LCN15Q6UWW0 184 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 ZNF705AQ6ZN79 300 aaPredicted RBP4.13□□□□□ -1.75
USP3-215ENST00000559771 Q6ZR54 194 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 CYP2G1PQ6ZSU1 146 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 LINC00336Q6ZUF6 198 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 LINC00518Q8N0U6 118 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 POM121L12Q8N7R1 296 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 METTL26Q96S19 204 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 IMMP2LQ96T52 175 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 SDF2L1Q9HCN8 221 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 HEYLQ9NQ87 328 aaPredicted RBP4.13□□□□□ -1.75
USP3-215ENST00000559771 DOK5Q9P104 306 aa4.13□□□□□ -1.75
USP3-215ENST00000559771 NACAE9PAV3 2078 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 A0A1W2PPV4 95 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 HELTA6NFD8 242 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 182.4 ms