RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 SMIM24O75264 130 aa1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 SOGA1O94964 1423 aa1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 TRACP01848 142 aa1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 SAA1P0DJI8 122 aaPredicted RBP1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 CR1P17927 2039 aa1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 LSM3P62310 102 aaKnown RBP1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 DIAPH2-AS1Q14236 149 aa1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 FAM74A1Q5RGS3 127 aa1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 ZNF833PQ6ZTB9 187 aa1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 OR5AS1Q8N127 324 aa1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 INTS1Q8N201 2190 aaKnown RBP1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 CCL4L1Q8NHW4 92 aa1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 C4orf3Q8WVX3 66 aa1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 MAGOHBQ96A72 148 aaKnown RBP1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 CDC42SE1Q9NRR8 79 aa1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 SIP14410 1827 aa1.36□□□□□ -2.19
CTDSPL2-207ENST00000559738 TRPM7Q96QT4 1865 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 ALPK3Q96L96 1907 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 A0A087WSZ3 146 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 A0A096LPI6 279 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 LOC107984156A0A0G2JMH3 177 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 C3orf85A0A1B0GTC6 90 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 MPC1LP0DKB6 136 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 SLC25A4P12235 298 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 KRTAP12-1P59990 96 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 PCBD1P61457 104 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 BLCAPP62952 87 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 HAGHLQ6PII5 290 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 TEN1Q86WV5 123 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 ARL17AQ8IVW1 177 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 OR4S1Q8NGB4 309 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 ZNF563Q8TA94 476 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 ZNF431Q8TF32 576 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 NABP2Q9BQ15 211 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 NAA38Q9BRA0 125 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 VPS25Q9BRG1 176 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 TNFSF18Q9UNG2 199 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 SOX21Q9Y651 276 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 COL1A1P02452 1464 aaPredicted RBP1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 TNRC6BQ9UPQ9 1833 aaKnown RBP1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 CCDC171Q6TFL3 1326 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 ANK1P16157 1881 aa1.35□□□□□ -2.19
CTDSPL2-207ENST00000559738 MYH13Q9UKX3 1938 aa1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 TNRC6AQ8NDV7 1962 aaKnown RBP1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 EXPH5Q8NEV8 1989 aa1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 ARFGEF3Q5TH69 2177 aa1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 OVOS2A0A0J9YW53 1432 aa1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 OVOS2Q6IE36 1432 aa1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 KIAA1549LQ6ZVL6 1849 aa1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 CHD3Q12873 2000 aaKnown RBP1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 F8W1H4 67 aa1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 EVI2AP22794 236 aa1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 SNRPD3P62318 126 aaKnown RBP1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 CNBPP62633 177 aaKnown RBP1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 DEFB115Q30KQ5 88 aa1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 GLIPR1L1Q6UWM5 242 aa1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 CASC2Q6XLA1 102 aa1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 PATE1Q8WXA2 126 aa1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 LINC00052Q96N35 136 aa1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 ORMDL1Q9P0S3 153 aa1.34□□□□□ -2.19
CTDSPL2-207ENST00000559738 MYH6P13533 1939 aa1.34□□□□□ -2.2
CTDSPL2-207ENST00000559738 COL4A1P02462 1669 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 HELZP42694 1942 aaKnown RBP1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 J3QR89 54 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 K7ERU9 68 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 CCL16O15467 120 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 NDUFA2O43678 99 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 MRPS14O60783 128 aaKnown RBP1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 DNAL4O96015 105 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 HIST1H1BP16401 226 aaKnown RBP1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 CKS2P33552 79 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 ETV6P41212 452 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 QRFPP83859 136 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 GLYATL3Q5SZD4 288 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 ZCCHC23Q6ZST2 131 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 LINC00269Q8N2A0 174 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 FAM19A2Q8N3H0 131 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 MMGT1Q8N4V1 131 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 COMMD3Q9UBI1 195 aa1.33□□□□□ -2.2
CTDSPL2-207ENST00000559738 TRBV6-4A0A1B0GX49 114 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 H3BRM9 83 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 HCRTO43612 131 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 EDF1O60869 148 aaKnown RBP1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 CD14P08571 375 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 FREM3P0C091 2139 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 IGLC6P0CF74 106 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 HLA-DRB4P13762 266 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 COX7CP15954 63 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 KDELR1P24390 212 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 AKR1D1P51857 326 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 MIR22HGQ0VDD5 57 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 NEDD8Q15843 81 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 FOXI2Q6ZQN5 318 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 CTAGE3PQ8IX95 158 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 OTOSQ8NHW6 89 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 PSMF1Q92530 271 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 LPAR5Q9H1C0 372 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 SLC35B3Q9H1N7 401 aa1.32□□□□□ -2.2
CTDSPL2-207ENST00000559738 TPT1P8Q9HAU6 139 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms