RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 Q6ZNX1 250 aa8.99□□□□□ -0.97
TPM1-220ENST00000559556 Q6ZRG5 221 aa8.99□□□□□ -0.97
TPM1-220ENST00000559556 OR1L4Q8NGR5 311 aa8.99□□□□□ -0.97
TPM1-220ENST00000559556 TRGV2A0A075B6R0 118 aa8.98□□□□□ -0.97
TPM1-220ENST00000559556 TRAV5A0A0B4J249 113 aa8.98□□□□□ -0.97
TPM1-220ENST00000559556 SIVA1O15304 175 aa8.98□□□□□ -0.97
TPM1-220ENST00000559556 ANXA2RQ3ZCQ2 193 aa8.98□□□□□ -0.97
TPM1-220ENST00000559556 FAM19A4Q96LR4 140 aa8.98□□□□□ -0.97
TPM1-220ENST00000559556 C11orf1Q9H5F2 150 aa8.98□□□□□ -0.97
TPM1-220ENST00000559556 GSN-AS1Q9NRJ2 163 aa8.98□□□□□ -0.97
TPM1-220ENST00000559556 FUT9Q9Y231 359 aa8.98□□□□□ -0.97
TPM1-220ENST00000559556 WDR83OSQ9Y284 106 aa8.98□□□□□ -0.97
TPM1-220ENST00000559556 TRBV19A0A075B6N1 114 aa8.97□□□□□ -0.97
TPM1-220ENST00000559556 L7N2F9 121 aa8.97□□□□□ -0.97
TPM1-220ENST00000559556 M0R3E3 92 aa8.97□□□□□ -0.97
TPM1-220ENST00000559556 CCSO14618 274 aa8.97□□□□□ -0.97
TPM1-220ENST00000559556 ZNF324O75467 553 aaPredicted RBP8.97□□□□□ -0.97
TPM1-220ENST00000559556 RPL29P47914 159 aaKnown RBP8.97□□□□□ -0.97
TPM1-220ENST00000559556 TCL1AP56279 114 aa8.97□□□□□ -0.97
TPM1-220ENST00000559556 VAMP2P63027 116 aa8.97□□□□□ -0.97
TPM1-220ENST00000559556 PDE6HQ13956 83 aa8.97□□□□□ -0.97
TPM1-220ENST00000559556 VWC2Q2TAL6 325 aa8.97□□□□□ -0.97
TPM1-220ENST00000559556 EIF4E3Q8N5X7 224 aaKnown RBP8.97□□□□□ -0.97
TPM1-220ENST00000559556 UQCC1Q9NVA1 299 aa8.97□□□□□ -0.97
TPM1-220ENST00000559556 PRELID1Q9Y255 219 aa8.97□□□□□ -0.97
TPM1-220ENST00000559556 TRGV1A0A0A0MS02 117 aa8.96□□□□□ -0.98
TPM1-220ENST00000559556 SPINK4O60575 86 aa8.96□□□□□ -0.98
TPM1-220ENST00000559556 CST7O76096 145 aa8.96□□□□□ -0.98
TPM1-220ENST00000559556 NDUFB4O95168 129 aa8.96□□□□□ -0.98
TPM1-220ENST00000559556 CRISP2P16562 243 aa8.96□□□□□ -0.98
TPM1-220ENST00000559556 CD300CQ08708 224 aa8.96□□□□□ -0.98
TPM1-220ENST00000559556 BTN1A1Q13410 526 aa8.96□□□□□ -0.98
TPM1-220ENST00000559556 IBA57Q5T440 356 aaKnown RBP8.96□□□□□ -0.98
TPM1-220ENST00000559556 ST6GAL2Q96JF0 529 aa8.96□□□□□ -0.98
TPM1-220ENST00000559556 SLC39A9Q9NUM3 307 aa8.96□□□□□ -0.98
TPM1-220ENST00000559556 TMEM14CQ9P0S9 112 aa8.96□□□□□ -0.98
TPM1-220ENST00000559556 LSM5Q9Y4Y9 91 aaKnown RBP8.96□□□□□ -0.98
TPM1-220ENST00000559556 ICOSQ9Y6W8 199 aa8.96□□□□□ -0.98
TPM1-220ENST00000559556 UBE2L5PA0A1B0GUS4 154 aa8.95□□□□□ -0.98
TPM1-220ENST00000559556 NXPH4O95158 308 aa8.95□□□□□ -0.98
TPM1-220ENST00000559556 CAV2P51636 162 aa8.95□□□□□ -0.98
TPM1-220ENST00000559556 ERCC8Q13216 396 aa8.95□□□□□ -0.98
TPM1-220ENST00000559556 CDPF1Q6NVV7 123 aa8.95□□□□□ -0.98
TPM1-220ENST00000559556 C9orf47Q6ZRZ4 202 aa8.95□□□□□ -0.98
TPM1-220ENST00000559556 C12orf45Q8N5I9 185 aaPredicted RBP8.95□□□□□ -0.98
TPM1-220ENST00000559556 CHAC2Q8WUX2 184 aa8.95□□□□□ -0.98
TPM1-220ENST00000559556 LINC00477Q96M19 166 aa8.95□□□□□ -0.98
TPM1-220ENST00000559556 KLF12Q9Y4X4 402 aa8.95□□□□□ -0.98
TPM1-220ENST00000559556 DNAH8Q96JB1 4490 aa8.95□□□□□ -0.98
TPM1-220ENST00000559556 EPM2AB3EWF7 344 aa8.94□□□□□ -0.98
TPM1-220ENST00000559556 PAX4O43316 350 aa8.94□□□□□ -0.98
TPM1-220ENST00000559556 SSNA1O43805 119 aa8.94□□□□□ -0.98
TPM1-220ENST00000559556 MPDU1O75352 247 aa8.94□□□□□ -0.98
TPM1-220ENST00000559556 NMBP08949 121 aa8.94□□□□□ -0.98
TPM1-220ENST00000559556 HIST1H1EP10412 219 aaKnown RBP8.94□□□□□ -0.98
TPM1-220ENST00000559556 BCAP31P51572 246 aa8.94□□□□□ -0.98
TPM1-220ENST00000559556 ERVFC1-1P60608 527 aa8.94□□□□□ -0.98
TPM1-220ENST00000559556 BAXQ07812 192 aa8.94□□□□□ -0.98
TPM1-220ENST00000559556 VGLL1Q99990 258 aa8.94□□□□□ -0.98
TPM1-220ENST00000559556 AGPAT4-IT1Q9H0P7 198 aa8.94□□□□□ -0.98
TPM1-220ENST00000559556 LYRM2Q9NU23 88 aaPredicted RBP8.94□□□□□ -0.98
TPM1-220ENST00000559556 PGPEP1Q9NXJ5 209 aa8.94□□□□□ -0.98
TPM1-220ENST00000559556 ALG5Q9Y673 324 aa8.94□□□□□ -0.98
TPM1-220ENST00000559556 IGSF23A1L1A6 192 aa8.93□□□□□ -0.98
TPM1-220ENST00000559556 FAM24AA6NFZ4 105 aa8.93□□□□□ -0.98
TPM1-220ENST00000559556 EREGO14944 169 aa8.93□□□□□ -0.98
TPM1-220ENST00000559556 GPX1P07203 203 aa8.93□□□□□ -0.98
TPM1-220ENST00000559556 PYYP10082 97 aa8.93□□□□□ -0.98
TPM1-220ENST00000559556 S100A11P31949 105 aa8.93□□□□□ -0.98
TPM1-220ENST00000559556 RNASE4P34096 147 aaKnown RBP8.93□□□□□ -0.98
TPM1-220ENST00000559556 SULT1A1P50225 295 aa8.93□□□□□ -0.98
TPM1-220ENST00000559556 PRR9Q5T870 116 aa8.93□□□□□ -0.98
TPM1-220ENST00000559556 ZFAND2AQ8N6M9 145 aa8.93□□□□□ -0.98
TPM1-220ENST00000559556 MED28Q9H204 178 aa8.93□□□□□ -0.98
TPM1-220ENST00000559556 AAMDCQ9H7C9 122 aa8.93□□□□□ -0.98
TPM1-220ENST00000559556 PRO0255Q9UI72 69 aa8.93□□□□□ -0.98
TPM1-220ENST00000559556 IGKV2-40A0A087WW87 121 aaPredicted RBP8.92□□□□□ -0.98
TPM1-220ENST00000559556 FAM25EA8MYX2 175 aa8.92□□□□□ -0.98
TPM1-220ENST00000559556 IGKV2D-40P01614 121 aaPredicted RBP8.92□□□□□ -0.98
TPM1-220ENST00000559556 PVALBP20472 110 aaPredicted RBP8.92□□□□□ -0.98
TPM1-220ENST00000559556 FGF7P21781 194 aa8.92□□□□□ -0.98
TPM1-220ENST00000559556 CRYBA4P53673 196 aa8.92□□□□□ -0.98
TPM1-220ENST00000559556 HBG1P69891 147 aa8.92□□□□□ -0.98
TPM1-220ENST00000559556 HBG2P69892 147 aa8.92□□□□□ -0.98
TPM1-220ENST00000559556 TMEM78Q5T7P6 136 aa8.92□□□□□ -0.98
TPM1-220ENST00000559556 NFE4Q86UQ8 179 aa8.92□□□□□ -0.98
TPM1-220ENST00000559556 STX12Q86Y82 276 aa8.92□□□□□ -0.98
TPM1-220ENST00000559556 EXOC3-AS1Q8N2X6 119 aa8.92□□□□□ -0.98
TPM1-220ENST00000559556 C2orf50Q96LR7 162 aa8.92□□□□□ -0.98
TPM1-220ENST00000559556 SEC22CQ9BRL7 303 aa8.92□□□□□ -0.98
TPM1-220ENST00000559556 TIMM9Q9Y5J7 89 aa8.92□□□□□ -0.98
TPM1-220ENST00000559556 IGHV1OR15-1A0A075B7D0 117 aa8.91□□□□□ -0.98
TPM1-220ENST00000559556 C5orf51A6NDU8 294 aa8.91□□□□□ -0.98
TPM1-220ENST00000559556 RGS13O14921 159 aa8.91□□□□□ -0.98
TPM1-220ENST00000559556 XGP55808 180 aa8.91□□□□□ -0.98
TPM1-220ENST00000559556 SLAQ13239 276 aa8.91□□□□□ -0.98
TPM1-220ENST00000559556 IL15RAQ13261 267 aa8.91□□□□□ -0.98
TPM1-220ENST00000559556 ICAM4Q14773 271 aa8.91□□□□□ -0.98
TPM1-220ENST00000559556 MRPL23Q16540 153 aaKnown RBP8.91□□□□□ -0.98
TPM1-220ENST00000559556 LYPD1Q8N2G4 141 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms