RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 MUC7Q8TAX7 377 aa14.65□□□□□ -0.06
TSPAN3-207ENST00000559494 NEU1Q99519 415 aa14.65□□□□□ -0.06
TSPAN3-207ENST00000559494 MAP1LC3BQ9GZQ8 125 aa14.65□□□□□ -0.06
TSPAN3-207ENST00000559494 INSP01308 110 aa14.64□□□□□ -0.07
TSPAN3-207ENST00000559494 TSPOP30536 169 aa14.64□□□□□ -0.07
TSPAN3-207ENST00000559494 FAM74A1Q5RGS3 127 aa14.64□□□□□ -0.07
TSPAN3-207ENST00000559494 FAM213BQ8TBF2 198 aa14.64□□□□□ -0.07
TSPAN3-207ENST00000559494 MBD3L1Q8WWY6 194 aa14.64□□□□□ -0.07
TSPAN3-207ENST00000559494 FAM19A4Q96LR4 140 aa14.64□□□□□ -0.07
TSPAN3-207ENST00000559494 C11orf68Q9H3H3 251 aaKnown RBP14.64□□□□□ -0.07
TSPAN3-207ENST00000559494 RBAKDNA6NC62 111 aa14.63□□□□□ -0.07
TSPAN3-207ENST00000559494 LEPP41159 167 aa14.63□□□□□ -0.07
TSPAN3-207ENST00000559494 SUMO1P63165 101 aaKnown RBP14.63□□□□□ -0.07
TSPAN3-207ENST00000559494 ARL6IP6Q8N6S5 226 aa14.63□□□□□ -0.07
TSPAN3-207ENST00000559494 CMTM2Q8TAZ6 248 aa14.63□□□□□ -0.07
TSPAN3-207ENST00000559494 ZNF492Q9P255 531 aa14.63□□□□□ -0.07
TSPAN3-207ENST00000559494 SMIM9A6NGZ8 99 aa14.62□□□□□ -0.07
TSPAN3-207ENST00000559494 J3KRW8 73 aa14.62□□□□□ -0.07
TSPAN3-207ENST00000559494 PRM2P04554 102 aa14.62□□□□□ -0.07
TSPAN3-207ENST00000559494 SLC25A5P05141 298 aaKnown RBP14.62□□□□□ -0.07
TSPAN3-207ENST00000559494 GNG5P63218 68 aa14.62□□□□□ -0.07
TSPAN3-207ENST00000559494 TMEM78Q5T7P6 136 aa14.62□□□□□ -0.07
TSPAN3-207ENST00000559494 DPPA3Q6W0C5 159 aa14.62□□□□□ -0.07
TSPAN3-207ENST00000559494 IL17DQ8TAD2 202 aa14.62□□□□□ -0.07
TSPAN3-207ENST00000559494 TMEM208Q9BTX3 173 aa14.62□□□□□ -0.07
TSPAN3-207ENST00000559494 RPH3ALQ9UNE2 315 aa14.62□□□□□ -0.07
TSPAN3-207ENST00000559494 A0A1W2PRE2 83 aa14.61□□□□□ -0.07
TSPAN3-207ENST00000559494 GGTLC3B5MD39 225 aa14.61□□□□□ -0.07
TSPAN3-207ENST00000559494 ZNF138P52744 262 aa14.61□□□□□ -0.07
TSPAN3-207ENST00000559494 GFI1BQ5VTD9 330 aa14.61□□□□□ -0.07
TSPAN3-207ENST00000559494 EIF5AL1Q6IS14 154 aaKnown RBP14.61□□□□□ -0.07
TSPAN3-207ENST00000559494 SFT2D1Q8WV19 159 aa14.61□□□□□ -0.07
TSPAN3-207ENST00000559494 YTHDF2Q9Y5A9 579 aaKnown RBP14.61□□□□□ -0.07
TSPAN3-207ENST00000559494 CRISP2P16562 243 aa14.6□□□□□ -0.07
TSPAN3-207ENST00000559494 UBE2G2P60604 165 aa14.6□□□□□ -0.07
TSPAN3-207ENST00000559494 GOLT1AQ6ZVE7 132 aa14.6□□□□□ -0.07
TSPAN3-207ENST00000559494 Q8TAT8 98 aa14.6□□□□□ -0.07
TSPAN3-207ENST00000559494 LINC01587Q99440 93 aa14.6□□□□□ -0.07
TSPAN3-207ENST00000559494 ZNF705GA8MUZ8 300 aaPredicted RBP14.59□□□□□ -0.07
TSPAN3-207ENST00000559494 KLLNB2CW77 178 aa14.59□□□□□ -0.07
TSPAN3-207ENST00000559494 C3orf84H3BNL1 204 aa14.59□□□□□ -0.07
TSPAN3-207ENST00000559494 HBE1P02100 147 aa14.59□□□□□ -0.07
TSPAN3-207ENST00000559494 ZFAND2AQ8N6M9 145 aa14.59□□□□□ -0.07
TSPAN3-207ENST00000559494 C5orf17Q8NAS9 161 aa14.59□□□□□ -0.07
TSPAN3-207ENST00000559494 EPDR1Q9UM22 224 aa14.59□□□□□ -0.07
TSPAN3-207ENST00000559494 TRAV12-3A0A0B4J271 114 aa14.58□□□□□ -0.08
TSPAN3-207ENST00000559494 A0A1B0GV50 99 aa14.58□□□□□ -0.08
TSPAN3-207ENST00000559494 FAM74A7A6NL05 159 aa14.58□□□□□ -0.08
TSPAN3-207ENST00000559494 H2AFB1P0C5Y9 115 aa14.58□□□□□ -0.08
TSPAN3-207ENST00000559494 SULT1A2P50226 295 aa14.58□□□□□ -0.08
TSPAN3-207ENST00000559494 RAB5CP51148 216 aa14.58□□□□□ -0.08
TSPAN3-207ENST00000559494 RRN3P1Q2M238 152 aa14.58□□□□□ -0.08
TSPAN3-207ENST00000559494 ZFAND6Q6FIF0 208 aa14.58□□□□□ -0.08
TSPAN3-207ENST00000559494 TMEM256Q8N2U0 113 aa14.58□□□□□ -0.08
TSPAN3-207ENST00000559494 C20orf144Q9BQM9 153 aa14.58□□□□□ -0.08
TSPAN3-207ENST00000559494 STARD9Q9P2P6 4700 aa14.57□□□□□ -0.08
TSPAN3-207ENST00000559494 TRBV7-9A0A0J9YWB2 115 aa14.57□□□□□ -0.08
TSPAN3-207ENST00000559494 TCRAP04437 139 aa14.57□□□□□ -0.08
TSPAN3-207ENST00000559494 NMBP08949 121 aa14.57□□□□□ -0.08
TSPAN3-207ENST00000559494 AZU1P20160 251 aa14.57□□□□□ -0.08
TSPAN3-207ENST00000559494 PRR9Q5T870 116 aa14.57□□□□□ -0.08
TSPAN3-207ENST00000559494 ALKAL2Q6UX46 152 aa14.57□□□□□ -0.08
TSPAN3-207ENST00000559494 CSMD3Q7Z407 3707 aa14.57□□□□□ -0.08
TSPAN3-207ENST00000559494 TRAV8-1A0A0A6YYK1 113 aa14.56□□□□□ -0.08
TSPAN3-207ENST00000559494 LOC102723971A0A1B0GUV8 181 aa14.56□□□□□ -0.08
TSPAN3-207ENST00000559494 C7orf71A4D174 169 aa14.56□□□□□ -0.08
TSPAN3-207ENST00000559494 ZNF324O75467 553 aaPredicted RBP14.56□□□□□ -0.08
TSPAN3-207ENST00000559494 GPX1P07203 203 aa14.56□□□□□ -0.08
TSPAN3-207ENST00000559494 RNASE4P34096 147 aaKnown RBP14.56□□□□□ -0.08
TSPAN3-207ENST00000559494 BTN1A1Q13410 526 aa14.56□□□□□ -0.08
TSPAN3-207ENST00000559494 C11orf45Q8TAV5 145 aa14.56□□□□□ -0.08
TSPAN3-207ENST00000559494 H7BYZ3 331 aa14.55□□□□□ -0.08
TSPAN3-207ENST00000559494 EMP1P54849 157 aa14.55□□□□□ -0.08
TSPAN3-207ENST00000559494 TAS2R60P59551 318 aa14.55□□□□□ -0.08
TSPAN3-207ENST00000559494 NANOS2P60321 138 aaKnown RBP14.55□□□□□ -0.08
TSPAN3-207ENST00000559494 CASC10Q5T4H9 136 aa14.55□□□□□ -0.08
TSPAN3-207ENST00000559494 TVP23CQ96ET8 276 aa14.55□□□□□ -0.08
TSPAN3-207ENST00000559494 SGK494Q96LW2 274 aa14.55□□□□□ -0.08
TSPAN3-207ENST00000559494 CELA1Q9UNI1 258 aa14.55□□□□□ -0.08
TSPAN3-207ENST00000559494 LENEPQ9Y5L5 61 aa14.55□□□□□ -0.08
TSPAN3-207ENST00000559494 SERTM2A0A1B0GWG4 89 aa14.54□□□□□ -0.08
TSPAN3-207ENST00000559494 TMEM189A5PLL7 270 aa14.54□□□□□ -0.08
TSPAN3-207ENST00000559494 HTN1P15515 57 aa14.54□□□□□ -0.08
TSPAN3-207ENST00000559494 CCL20P78556 96 aa14.54□□□□□ -0.08
TSPAN3-207ENST00000559494 Q6ZQT7 251 aa14.54□□□□□ -0.08
TSPAN3-207ENST00000559494 CCDC28AQ8IWP9 274 aa14.54□□□□□ -0.08
TSPAN3-207ENST00000559494 NKX6-2Q9C056 277 aaPredicted RBP14.54□□□□□ -0.08
TSPAN3-207ENST00000559494 DYNC2H1Q8NCM8 4307 aaKnown RBP14.54□□□□□ -0.08
TSPAN3-207ENST00000559494 TRAV1-1A0A0B4J248 108 aa14.53□□□□□ -0.08
TSPAN3-207ENST00000559494 PAGE4O60829 102 aa14.53□□□□□ -0.08
TSPAN3-207ENST00000559494 IFNA7P01567 189 aa14.53□□□□□ -0.08
TSPAN3-207ENST00000559494 NIPSNAP3BQ9BS92 247 aa14.53□□□□□ -0.08
TSPAN3-207ENST00000559494 CXorf65A6NEN9 183 aa14.52□□□□□ -0.08
TSPAN3-207ENST00000559494 IGLV2-11P01706 119 aa14.52□□□□□ -0.08
TSPAN3-207ENST00000559494 PMS2P11Q13670 270 aa14.52□□□□□ -0.08
TSPAN3-207ENST00000559494 CST9LP1Q5W188 147 aa14.52□□□□□ -0.08
TSPAN3-207ENST00000559494 CYB561D1Q8N8Q1 229 aa14.52□□□□□ -0.08
TSPAN3-207ENST00000559494 LINC00479Q96M42 142 aa14.52□□□□□ -0.08
TSPAN3-207ENST00000559494 ATG101Q9BSB4 218 aa14.52□□□□□ -0.08
TSPAN3-207ENST00000559494 TENM2Q9NT68 2774 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms