RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ZFP30Q9Y2G7 519 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 MGAMO43451 1857 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 NUP210Q8TEM1 1887 aaPredicted RBP0.92□□□□□ -2.26
GABPB1-209ENST00000559100 ALPK2Q86TB3 2170 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 TRAV23DV6A0A075B6W5 121 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 IGLV3-32A0A0A0MS00 114 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 A0A1B0GW64 132 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 J3QR89 54 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 M0R2Z0 102 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 UQCRQO14949 82 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 NUPR1O60356 82 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 SULT1C4O75897 302 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 PPYP01298 95 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 SLC25A5P05141 298 aaKnown RBP0.91□□□□□ -2.26
GABPB1-209ENST00000559100 SLC25A4P12235 298 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 COX4I1P13073 169 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 HIST1H1BP16401 226 aaKnown RBP0.91□□□□□ -2.26
GABPB1-209ENST00000559100 ETV6P41212 452 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 S100A12P80511 92 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 SMIM21Q3B7S5 101 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 GDF5OSQ5U4N7 250 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 HAGHLQ6PII5 290 aaPredicted RBP0.91□□□□□ -2.26
GABPB1-209ENST00000559100 Q6ZSA8 131 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 C3orf62Q6ZUJ4 267 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 TSTD1Q8NFU3 115 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 OR4S1Q8NGB4 309 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 NAT14Q8WUY8 206 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 CIB3Q96Q77 187 aaPredicted RBP0.91□□□□□ -2.26
GABPB1-209ENST00000559100 SMIM7Q9BQ49 75 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 WFDC10AQ9H1F0 79 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 MYOFQ9NZM1 2061 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 MED23Q9ULK4 1368 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 TCOF1Q13428 1488 aaKnown RBP0.91□□□□□ -2.26
GABPB1-209ENST00000559100 CR1P17927 2039 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 DIDO1Q9BTC0 2240 aaKnown RBP0.91□□□□□ -2.26
GABPB1-209ENST00000559100 LAMB4A4D0S4 1761 aa0.91□□□□□ -2.26
GABPB1-209ENST00000559100 FBN1P35555 2871 aaKnown RBP0.9□□□□□ -2.26
GABPB1-209ENST00000559100 ARFGEF3Q5TH69 2177 aa0.9□□□□□ -2.26
GABPB1-209ENST00000559100 SCN3AQ9NY46 2000 aa0.9□□□□□ -2.27
GABPB1-209ENST00000559100 EDF1O60869 148 aaKnown RBP0.9□□□□□ -2.27
GABPB1-209ENST00000559100 SNRPD3P62318 126 aaKnown RBP0.9□□□□□ -2.27
GABPB1-209ENST00000559100 HIST1H1AQ02539 215 aaPredicted RBP0.9□□□□□ -2.27
GABPB1-209ENST00000559100 SPRNQ5BIV9 151 aa0.9□□□□□ -2.27
GABPB1-209ENST00000559100 LINC00322Q6ZN03 302 aaPredicted RBP0.9□□□□□ -2.27
GABPB1-209ENST00000559100 C5orf17Q8NAS9 161 aa0.9□□□□□ -2.27
GABPB1-209ENST00000559100 CCL4L1Q8NHW4 92 aa0.9□□□□□ -2.27
GABPB1-209ENST00000559100 OBSCN-AS1Q96MR7 158 aa0.9□□□□□ -2.27
GABPB1-209ENST00000559100 NABP2Q9BQ15 211 aa0.9□□□□□ -2.27
GABPB1-209ENST00000559100 FRMPD1Q5SYB0 1578 aa0.9□□□□□ -2.27
GABPB1-209ENST00000559100 FAM135BQ49AJ0 1406 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 NISCHQ9Y2I1 1504 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 TRPM1Q7Z4N2 1603 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 INTS1Q8N201 2190 aaKnown RBP0.89□□□□□ -2.27
GABPB1-209ENST00000559100 ANKRD31Q8N7Z5 1873 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 COL4A1P02462 1669 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 COL4A5P29400 1685 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 LOC110117498A0A087WWA1 95 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 IGHV1-24A0A0C4DH33 117 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 PNMA8CA0A1B0GUJ8 204 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 JMJD7-PLA2G4BH0Y9G9 81 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 K7ERU9 68 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 M0R2N4 97 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 INE1O15225 51 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 RBP4P02753 201 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 LYNX1P0DP58 116 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 NCS1P62166 190 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 CCDC58Q4VC31 144 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 MORN2Q502X0 79 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 ZCCHC23Q6ZST2 131 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 LINC00269Q8N2A0 174 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 C10orf111Q8N326 155 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 FAM19A2Q8N3H0 131 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 MMGT1Q8N4V1 131 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 OTOSQ8NHW6 89 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 TCEAL4Q96EI5 215 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 PFDN5Q99471 154 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 TSC22D3Q99576 134 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 COMMD3Q9UBI1 195 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 MPC1Q9Y5U8 109 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 SDK1Q7Z5N4 2213 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 CEP192Q8TEP8 1941 aa0.89□□□□□ -2.27
GABPB1-209ENST00000559100 IFITM5A6NNB3 132 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 ANGP03950 147 aaKnown RBP0.88□□□□□ -2.27
GABPB1-209ENST00000559100 HMGN1P05114 100 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 CD14P08571 375 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 HLA-DRB4P13762 266 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 KDELR1P24390 212 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 DNAJB13P59910 316 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 KRTAP12-4P60329 112 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 SPATA45Q537H7 98 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 Q5XG85 94 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 KRTAP26-1Q6PEX3 210 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 LINC00299Q6ZSB3 139 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 OR8J3Q8NGG0 315 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 PSMF1Q92530 271 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 LINC00526Q96FQ7 95 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 ODF3Q96PU9 254 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 SLC35B3Q9H1N7 401 aa0.88□□□□□ -2.27
GABPB1-209ENST00000559100 BOKQ9UMX3 212 aaPredicted RBP0.88□□□□□ -2.27
GABPB1-209ENST00000559100 HLA-DRB4X5D2U9 266 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms