RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 CCDC140Q96MF4 163 aa12.14□□□□□ -0.47
CDC42BPB-204ENST00000559043 TRAV8-1A0A0A6YYK1 113 aa12.13□□□□□ -0.47
CDC42BPB-204ENST00000559043 A0A1B0GXF2 115 aa12.13□□□□□ -0.47
CDC42BPB-204ENST00000559043 FAM223BA6NKX1 122 aa12.13□□□□□ -0.47
CDC42BPB-204ENST00000559043 A8MWL6 223 aa12.13□□□□□ -0.47
CDC42BPB-204ENST00000559043 ATP5G2Q06055 141 aa12.13□□□□□ -0.47
CDC42BPB-204ENST00000559043 PDE6HQ13956 83 aa12.13□□□□□ -0.47
CDC42BPB-204ENST00000559043 KIAA1644Q3SXP7 199 aa12.13□□□□□ -0.47
CDC42BPB-204ENST00000559043 GDF5OSQ5U4N7 250 aa12.13□□□□□ -0.47
CDC42BPB-204ENST00000559043 FAM223AQ8IWN6 122 aa12.13□□□□□ -0.47
CDC42BPB-204ENST00000559043 TMEM75Q8N9X5 138 aa12.13□□□□□ -0.47
CDC42BPB-204ENST00000559043 A0A1W2PRX2 142 aa12.12□□□□□ -0.47
CDC42BPB-204ENST00000559043 P01737 135 aa12.12□□□□□ -0.47
CDC42BPB-204ENST00000559043 CTSGP08311 255 aa12.12□□□□□ -0.47
CDC42BPB-204ENST00000559043 SLAQ13239 276 aa12.12□□□□□ -0.47
CDC42BPB-204ENST00000559043 ZNF664Q8N3J9 261 aa12.12□□□□□ -0.47
CDC42BPB-204ENST00000559043 ZNF502Q8TBZ5 544 aa12.12□□□□□ -0.47
CDC42BPB-204ENST00000559043 VN1R17PQ8TDU5 208 aa12.12□□□□□ -0.47
CDC42BPB-204ENST00000559043 USMG5Q96IX5 58 aa12.12□□□□□ -0.47
CDC42BPB-204ENST00000559043 UBE2E2Q96LR5 201 aa12.12□□□□□ -0.47
CDC42BPB-204ENST00000559043 CITED1Q99966 193 aa12.12□□□□□ -0.47
CDC42BPB-204ENST00000559043 GFRA4Q9GZZ7 299 aa12.12□□□□□ -0.47
CDC42BPB-204ENST00000559043 SCGB2A1O75556 95 aa12.12□□□□□ -0.47
CDC42BPB-204ENST00000559043 SRIP30626 198 aa12.12□□□□□ -0.47
CDC42BPB-204ENST00000559043 C16orf54Q6UWD8 224 aa12.12□□□□□ -0.47
CDC42BPB-204ENST00000559043 FAM231BA6NCW3 169 aa12.11□□□□□ -0.47
CDC42BPB-204ENST00000559043 Q6ZWC4 215 aa12.11□□□□□ -0.47
CDC42BPB-204ENST00000559043 PRNTQ86SH4 94 aa12.11□□□□□ -0.47
CDC42BPB-204ENST00000559043 GTSF1Q8WW33 167 aa12.11□□□□□ -0.47
CDC42BPB-204ENST00000559043 PRO1933Q9H354 126 aa12.11□□□□□ -0.47
CDC42BPB-204ENST00000559043 A0A0G2JLM5 398 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 OR2T8A6NH00 312 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 CLEC3BP05452 202 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 DDTP30046 118 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 RIPPLY3P57055 190 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 DEFB136Q30KP8 78 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 KHDC1LQ5JSQ8 128 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 CLEC19AQ6UXS0 136 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 OR4B1Q8NGF8 309 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 DAZAP1Q96EP5 407 aaKnown RBP12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 ZFP30Q9Y2G7 519 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 ZNF785A8K8V0 405 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 DIRC3C9JPN6 131 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 K7EQM0 130 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 ZNF253O75346 499 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 TCF24Q7RTU0 167 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 DUX3Q96PT4 197 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 NAGKQ9UJ70 344 aa12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 TSSC4Q9Y5U2 329 aaPredicted RBP12.1□□□□□ -0.47
CDC42BPB-204ENST00000559043 VWFP04275 2813 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 SCGB1D1O95968 90 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 GPX1P07203 203 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 PSG3Q16557 428 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 C8orf86Q6ZUL3 223 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 EEF1AKMT3Q96AZ1 226 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 KCNS1Q96KK3 526 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 RCHY1Q96PM5 261 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 ZNF747Q9BV97 191 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 TRBV7-1A0A0A6YYK4 115 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 DEFA6Q01524 100 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 FAM209BQ5JX69 171 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 ARL6IP6Q8N6S5 226 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 KLHL30-AS1Q8NEE0 82 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 PSG8Q9UQ74 426 aa12.09□□□□□ -0.47
CDC42BPB-204ENST00000559043 A0A1W2PS18 150 aa12.08□□□□□ -0.48
CDC42BPB-204ENST00000559043 A8MWP6 167 aa12.08□□□□□ -0.48
CDC42BPB-204ENST00000559043 LGALS1P09382 135 aaKnown RBP12.08□□□□□ -0.48
CDC42BPB-204ENST00000559043 RPL7P18124 248 aaKnown RBP12.08□□□□□ -0.48
CDC42BPB-204ENST00000559043 GPR183P32249 361 aa12.08□□□□□ -0.48
CDC42BPB-204ENST00000559043 HBBP68871 147 aa12.08□□□□□ -0.48
CDC42BPB-204ENST00000559043 KLF5Q13887 457 aaPredicted RBP12.08□□□□□ -0.48
CDC42BPB-204ENST00000559043 NSUN5P1Q3KNT7 163 aa12.08□□□□□ -0.48
CDC42BPB-204ENST00000559043 RBPMS2Q6ZRY4 209 aaKnown RBP12.08□□□□□ -0.48
CDC42BPB-204ENST00000559043 C18orf32Q8TCD1 76 aa12.08□□□□□ -0.48
CDC42BPB-204ENST00000559043 C4orf3Q8WVX3 66 aa12.08□□□□□ -0.48
CDC42BPB-204ENST00000559043 ZC2HC1AQ96GY0 325 aa12.08□□□□□ -0.48
CDC42BPB-204ENST00000559043 SAMD10Q9BYL1 202 aa12.08□□□□□ -0.48
CDC42BPB-204ENST00000559043 RABAC1Q9UI14 185 aa12.08□□□□□ -0.48
CDC42BPB-204ENST00000559043 SERTM2A0A1B0GWG4 89 aa12.07□□□□□ -0.48
CDC42BPB-204ENST00000559043 FOXA3P55318 350 aaPredicted RBP12.07□□□□□ -0.48
CDC42BPB-204ENST00000559043 PSG9Q00887 426 aa12.07□□□□□ -0.48
CDC42BPB-204ENST00000559043 C12orf54Q6X4T0 127 aa12.07□□□□□ -0.48
CDC42BPB-204ENST00000559043 C14orf144Q96I85 54 aa12.07□□□□□ -0.48
CDC42BPB-204ENST00000559043 AAMDCQ9H7C9 122 aa12.07□□□□□ -0.48
CDC42BPB-204ENST00000559043 IGHV3-35A0A0C4DH35 117 aa12.07□□□□□ -0.48
CDC42BPB-204ENST00000559043 M0R3E3 92 aa12.07□□□□□ -0.48
CDC42BPB-204ENST00000559043 CAMPP49913 170 aa12.07□□□□□ -0.48
CDC42BPB-204ENST00000559043 C3orf56Q8N813 242 aa12.07□□□□□ -0.48
CDC42BPB-204ENST00000559043 RAX2Q96IS3 184 aa12.07□□□□□ -0.48
CDC42BPB-204ENST00000559043 ALKBH7Q9BT30 221 aaPredicted RBP12.07□□□□□ -0.48
CDC42BPB-204ENST00000559043 PEF1Q9UBV8 284 aaKnown RBP12.07□□□□□ -0.48
CDC42BPB-204ENST00000559043 WNK1Q9H4A3 2382 aa12.06□□□□□ -0.48
CDC42BPB-204ENST00000559043 IGHV4OR15-8A0A075B7B6 117 aa12.06□□□□□ -0.48
CDC42BPB-204ENST00000559043 A0A087WW49 117 aa12.06□□□□□ -0.48
CDC42BPB-204ENST00000559043 S100A7P31151 101 aa12.06□□□□□ -0.48
CDC42BPB-204ENST00000559043 REC114Q7Z4M0 266 aa12.06□□□□□ -0.48
CDC42BPB-204ENST00000559043 NDUFA11Q86Y39 141 aa12.06□□□□□ -0.48
CDC42BPB-204ENST00000559043 PGLYRP4Q96LB8 373 aa12.06□□□□□ -0.48
CDC42BPB-204ENST00000559043 TRRAPQ9Y4A5 3859 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms