RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 VAX2Q9UIW0 290 aa4.87□□□□□ -1.63
CHRNA3-204ENST00000559002 KIR2DL5BA0A0G2JN68 375 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 KIR2DL5BA0A0G2JPC4 375 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 SCO2A0A1W2PP80 73 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 RBMY1BA6NDE4 496 aaKnown RBP4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 RBMY1EA6NEQ0 496 aaKnown RBP4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 FBLL1A6NHQ2 334 aaKnown RBP4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 A8MZ25 164 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 RGS13O14921 159 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 CA1P00915 261 aaPredicted RBP4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 RBMY1DP0C7P1 496 aaKnown RBP4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 FRMD6-AS1P0C7T7 363 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 TSPOP30536 169 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 LEPP41159 167 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 ZNF138P52744 262 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 ZNF506Q5JVG8 444 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 C9orf47Q6ZRZ4 202 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 CCDC28AQ8IWP9 274 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 KIR2DL5AQ8N109 375 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 TMEM75Q8N9X5 138 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 KIR2DL5BQ8NHK3 375 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 Q8TAT8 98 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 CLUHP3Q96NS8 147 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 VGLL1Q99990 258 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 NDFIP1Q9BT67 221 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 C1QTNF4Q9BXJ3 329 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 CSTL1Q9H114 145 aa4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 PRKDCP78527 4128 aaKnown RBP4.86□□□□□ -1.63
CHRNA3-204ENST00000559002 TRAV8-1A0A0A6YYK1 113 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 J3KRW8 73 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 M0R2Z0 102 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 UBE2CO00762 179 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 INSP01308 110 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 AMBPP02760 352 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 S100A9P06702 114 aaKnown RBP4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 CT45A10P0DMU9 189 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 CEBPGP53567 150 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 FXYD7P58549 80 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 FLI1Q01543 452 aaPredicted RBP4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 PEA15Q15121 130 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 SPINK13Q1W4C9 94 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 PRNTQ86SH4 94 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 FMC1Q96HJ9 113 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 SGK494Q96LW2 274 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 ODF3Q96PU9 254 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 RARRES2Q99969 163 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 AGPAT4-IT1Q9H0P7 198 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 SLC35B3Q9H1N7 401 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 MED9Q9NWA0 146 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 ZNF492Q9P255 531 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 PSG8Q9UQ74 426 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 DNAH9Q9NYC9 4486 aa4.85□□□□□ -1.63
CHRNA3-204ENST00000559002 TRAV34A0A0B4J273 112 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 TRBV7-9A0A0J9YWB2 115 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 A8MTW9 85 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 TMEM250H0YL14 139 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 GPX1P07203 203 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 RPL35P42766 123 aaKnown RBP4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 CDKN1BP46527 198 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 SAPCD1Q5SSQ6 148 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 AMTNQ6UX39 209 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 LINC00322Q6ZN03 302 aaPredicted RBP4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 Q86TA4 180 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 C2CD4CQ8TF44 421 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 C11orf52Q96A22 123 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 LINC00479Q96M42 142 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 ASCL2Q99929 193 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 KRTAP3-3Q9BYR6 98 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 KRTAP3-2Q9BYR7 98 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 TREM1Q9NP99 234 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 XCL2Q9UBD3 114 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 LENEPQ9Y5L5 61 aa4.84□□□□□ -1.63
CHRNA3-204ENST00000559002 TRAV12-2A0A075B6T6 113 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 TRBV6-1A0A0K0K1D8 114 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 RAB19A4D1S5 217 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 NDUFS6O75380 124 aaKnown RBP4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 IGLV2-11P01706 119 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 CRISP2P16562 243 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 RNASE4P34096 147 aaKnown RBP4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 GNG4P50150 75 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 TAS2R60P59551 318 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 TMEM183BQ1AE95 376 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 ZNF674Q2M3X9 581 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 DEFB135Q30KP9 77 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 GFI1BQ5VTD9 330 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 IGF2BP2-AS1Q96M15 143 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 RCHY1Q96PM5 261 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 B9D2Q9BPU9 175 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 SPATA25Q9BR10 227 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 NIPSNAP3BQ9BS92 247 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 TMEM208Q9BTX3 173 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 DERL1Q9BUN8 251 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 SMDT1Q9H4I9 107 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 ZFP30Q9Y2G7 519 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 GOLT1BQ9Y3E0 138 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 KLF12Q9Y4X4 402 aa4.83□□□□□ -1.64
CHRNA3-204ENST00000559002 IGHV3OR16-12A0A075B7B8 117 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 TRAV12-3A0A0B4J271 114 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 C7orf71A4D174 169 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 KLLNB2CW77 178 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms