RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 TCRBP04435 133 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 ATP5G1P05496 136 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 CDKN1BP46527 198 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 ATP5G3P48201 142 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 TAS2R30P59541 319 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 PLP1P60201 277 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 RAB31Q13636 194 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 OPCMLQ14982 345 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 OXA1LQ15070 435 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 SOHLH1Q5JUK2 328 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 LCN15Q6UWW0 184 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 NRARPQ7Z6K4 114 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 BPIFA4PQ86YQ2 179 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 ZNF431Q8TF32 576 aaPredicted RBP5.15□□□□□ -1.59
SPG11-213ENST00000558988 C16orf74Q96GX8 76 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 FAM210BQ96KR6 192 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 SLC50A1Q9BRV3 221 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 ZNF331Q9NQX6 463 aaPredicted RBP5.15□□□□□ -1.59
SPG11-213ENST00000558988 UQCC1Q9NVA1 299 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 SACSQ9NZJ4 4579 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 LYSTQ99698 3801 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 NACAE9PAV3 2078 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 TRAV12-3A0A0B4J271 114 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 A0A0J9YY99 117 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 IGSF23A1L1A6 192 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 FNDC10F2Z333 226 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 H3BQ15 152 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 MRPS12O15235 138 aaKnown RBP5.14□□□□□ -1.59
SPG11-213ENST00000558988 GAGE7O76087 117 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 GAGE12FP0CL80 117 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 GAGE12GP0CL81 117 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 GAGE12IP0CL82 117 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 PVALBP20472 110 aaPredicted RBP5.14□□□□□ -1.59
SPG11-213ENST00000558988 FGF7P21781 194 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 TAS2R60P59551 318 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 OR5I1Q13606 314 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 CLINT1Q14677 625 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 LGALS9BQ3B8N2 356 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 C1orf134Q5TEV5 83 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 PXDC1Q5TGL8 231 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 Q6ZRG5 221 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 TMEM256Q8N2U0 113 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 C12orf45Q8N5I9 185 aaPredicted RBP5.14□□□□□ -1.59
SPG11-213ENST00000558988 C15orf53Q8NAA6 179 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 TMEM37Q8WXS4 190 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 C2orf50Q96LR7 162 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 GPN1Q9HCN4 374 aaPredicted RBP5.14□□□□□ -1.59
SPG11-213ENST00000558988 RNF24Q9Y225 148 aa5.14□□□□□ -1.59
SPG11-213ENST00000558988 TIMM8BQ9Y5J9 83 aaPredicted RBP5.14□□□□□ -1.59
SPG11-213ENST00000558988 A0A1B0GVY2 172 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 FAM240BA0A1B0GVZ2 78 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 PLAC8L1A1L4L8 177 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 H0YIZ8 118 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 H7BYZ3 331 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 SIX6O95475 246 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 CXCL2P19875 107 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 TSPOP30536 169 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 B2MP61769 119 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 CNPY1Q3B7I2 92 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 RNF212Q495C1 297 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 LRRC37A5PQ49AS3 106 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 GFI1BQ5VTD9 330 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 STX12Q86Y82 276 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 THAP6Q8TBB0 222 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 BLNKQ8WV28 456 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 GGACTQ9BVM4 153 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 DNAJC4Q9NNZ3 241 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 SLC39A9Q9NUM3 307 aa5.13□□□□□ -1.59
SPG11-213ENST00000558988 CBY3A6NI87 242 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 SNURFLB1AK76 121 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 M0R3E3 92 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 RLN2P04090 185 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 IGLC2P0DOY2 106 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 PYYP10082 97 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 LEPP41159 167 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 SULT1A1P50225 295 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 CCL18P55774 89 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 HBG1P69891 147 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 HBG2P69892 147 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 ERCC8Q13216 396 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 GCSAMLQ5JQS6 135 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 Q6ZR54 194 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 OR1L4Q8NGR5 311 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 TMEM263Q8WUH6 116 aaKnown RBP5.12□□□□□ -1.59
SPG11-213ENST00000558988 PFDN5Q99471 154 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 ZNF586Q9NXT0 402 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 WDR83OSQ9Y284 106 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 TIMM9Q9Y5J7 89 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 PXMP4Q9Y6I8 212 aa5.12□□□□□ -1.59
SPG11-213ENST00000558988 TRAV26-1A0A087WT03 109 aa5.11□□□□□ -1.59
SPG11-213ENST00000558988 CT45A10P0DMU9 189 aa5.11□□□□□ -1.59
SPG11-213ENST00000558988 RNASE4P34096 147 aaKnown RBP5.11□□□□□ -1.59
SPG11-213ENST00000558988 FAM122CQ6P4D5 195 aa5.11□□□□□ -1.59
SPG11-213ENST00000558988 ZNF493Q6ZR52 646 aa5.11□□□□□ -1.59
SPG11-213ENST00000558988 SSX7Q7RTT5 188 aa5.11□□□□□ -1.59
SPG11-213ENST00000558988 EXOC3-AS1Q8N2X6 119 aa5.11□□□□□ -1.59
SPG11-213ENST00000558988 TMEM252Q8N6L7 170 aa5.11□□□□□ -1.59
SPG11-213ENST00000558988 ENKURQ8TC29 256 aa5.11□□□□□ -1.59
SPG11-213ENST00000558988 RNASE8Q8TDE3 154 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms