RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 ERCC8Q13216 396 aa13.64□□□□□ -0.23
RABGGTA-208ENST00000558954 TMED6Q8WW62 240 aa13.64□□□□□ -0.23
RABGGTA-208ENST00000558954 MAP1LC3BQ9GZQ8 125 aa13.64□□□□□ -0.23
RABGGTA-208ENST00000558954 RBMY1A1P0DJD3 496 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-208ENST00000558954 RBMY1CP0DJD4 496 aa13.63□□□□□ -0.23
RABGGTA-208ENST00000558954 RBMY1FQ15415 496 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-208ENST00000558954 EIF5AL1Q6IS14 154 aaKnown RBP13.63□□□□□ -0.23
RABGGTA-208ENST00000558954 DPPA3Q6W0C5 159 aa13.63□□□□□ -0.23
RABGGTA-208ENST00000558954 ARL6IP6Q8N6S5 226 aa13.63□□□□□ -0.23
RABGGTA-208ENST00000558954 C20orf144Q9BQM9 153 aa13.63□□□□□ -0.23
RABGGTA-208ENST00000558954 AGPAT4-IT1Q9H0P7 198 aa13.63□□□□□ -0.23
RABGGTA-208ENST00000558954 TMEM189A5PLL7 270 aa13.62□□□□□ -0.23
RABGGTA-208ENST00000558954 DIRC3C9JPN6 131 aa13.62□□□□□ -0.23
RABGGTA-208ENST00000558954 C5orf17Q8NAS9 161 aa13.62□□□□□ -0.23
RABGGTA-208ENST00000558954 VGLL1Q99990 258 aa13.62□□□□□ -0.23
RABGGTA-208ENST00000558954 RPH3ALQ9UNE2 315 aa13.62□□□□□ -0.23
RABGGTA-208ENST00000558954 FHITP49789 147 aa13.61□□□□□ -0.23
RABGGTA-208ENST00000558954 ZNF138P52744 262 aa13.61□□□□□ -0.23
RABGGTA-208ENST00000558954 FGF8P55075 233 aaPredicted RBP13.61□□□□□ -0.23
RABGGTA-208ENST00000558954 RRN3P1Q2M238 152 aa13.61□□□□□ -0.23
RABGGTA-208ENST00000558954 CASC10Q5T4H9 136 aa13.61□□□□□ -0.23
RABGGTA-208ENST00000558954 GFI1BQ5VTD9 330 aa13.61□□□□□ -0.23
RABGGTA-208ENST00000558954 SLC51BQ86UW2 128 aa13.61□□□□□ -0.23
RABGGTA-208ENST00000558954 C9orf62Q8N4C0 152 aa13.61□□□□□ -0.23
RABGGTA-208ENST00000558954 C11orf45Q8TAV5 145 aa13.61□□□□□ -0.23
RABGGTA-208ENST00000558954 FAM213BQ8TBF2 198 aa13.61□□□□□ -0.23
RABGGTA-208ENST00000558954 TRBV7-9A0A0J9YWB2 115 aa13.6□□□□□ -0.23
RABGGTA-208ENST00000558954 A0A1W2PRE2 83 aa13.6□□□□□ -0.23
RABGGTA-208ENST00000558954 NMBP08949 121 aa13.6□□□□□ -0.23
RABGGTA-208ENST00000558954 KIR3DS1Q14943 382 aa13.6□□□□□ -0.23
RABGGTA-208ENST00000558954 ZFAND6Q6FIF0 208 aa13.6□□□□□ -0.23
RABGGTA-208ENST00000558954 Q8TAT8 98 aa13.6□□□□□ -0.23
RABGGTA-208ENST00000558954 FAM19A4Q96LR4 140 aa13.6□□□□□ -0.23
RABGGTA-208ENST00000558954 ZNF492Q9P255 531 aa13.6□□□□□ -0.23
RABGGTA-208ENST00000558954 LOC102723971A0A1B0GUV8 181 aa13.59□□□□□ -0.23
RABGGTA-208ENST00000558954 SERTM2A0A1B0GWG4 89 aa13.59□□□□□ -0.23
RABGGTA-208ENST00000558954 CXorf65A6NEN9 183 aa13.59□□□□□ -0.23
RABGGTA-208ENST00000558954 KLLNB2CW77 178 aa13.59□□□□□ -0.23
RABGGTA-208ENST00000558954 GGTLC3B5MD39 225 aa13.59□□□□□ -0.23
RABGGTA-208ENST00000558954 H7BYZ3 331 aa13.59□□□□□ -0.23
RABGGTA-208ENST00000558954 J3KRW8 73 aa13.59□□□□□ -0.23
RABGGTA-208ENST00000558954 CRISP2P16562 243 aa13.59□□□□□ -0.23
RABGGTA-208ENST00000558954 GOLT1AQ6ZVE7 132 aa13.59□□□□□ -0.23
RABGGTA-208ENST00000558954 LINC01587Q99440 93 aa13.59□□□□□ -0.23
RABGGTA-208ENST00000558954 TMPRSS5Q9H3S3 457 aa13.59□□□□□ -0.23
RABGGTA-208ENST00000558954 PLA2G2EQ9NZK7 142 aa13.59□□□□□ -0.23
RABGGTA-208ENST00000558954 C7orf71A4D174 169 aa13.58□□□□□ -0.24
RABGGTA-208ENST00000558954 RAB5CP51148 216 aa13.58□□□□□ -0.24
RABGGTA-208ENST00000558954 TAS2R60P59551 318 aa13.58□□□□□ -0.24
RABGGTA-208ENST00000558954 GNG5P63218 68 aa13.58□□□□□ -0.24
RABGGTA-208ENST00000558954 PMS2P11Q13670 270 aa13.58□□□□□ -0.24
RABGGTA-208ENST00000558954 NIPSNAP3BQ9BS92 247 aa13.58□□□□□ -0.24
RABGGTA-208ENST00000558954 LENEPQ9Y5L5 61 aa13.58□□□□□ -0.24
RABGGTA-208ENST00000558954 DNAH7Q8WXX0 4024 aa13.58□□□□□ -0.24
RABGGTA-208ENST00000558954 TRAV12-3A0A0B4J271 114 aa13.57□□□□□ -0.24
RABGGTA-208ENST00000558954 ZNF705GA8MUZ8 300 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-208ENST00000558954 K7EQM0 130 aa13.57□□□□□ -0.24
RABGGTA-208ENST00000558954 GPX1P07203 203 aa13.57□□□□□ -0.24
RABGGTA-208ENST00000558954 UBE2G2P60604 165 aa13.57□□□□□ -0.24
RABGGTA-208ENST00000558954 SUMO1P63165 101 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-208ENST00000558954 ZFAND2AQ8N6M9 145 aa13.57□□□□□ -0.24
RABGGTA-208ENST00000558954 SFT2D1Q8WV19 159 aa13.57□□□□□ -0.24
RABGGTA-208ENST00000558954 NKX6-2Q9C056 277 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-208ENST00000558954 TEX48A0A1B0GUV7 120 aa13.56□□□□□ -0.24
RABGGTA-208ENST00000558954 NUPR2A6NF83 97 aa13.56□□□□□ -0.24
RABGGTA-208ENST00000558954 TCRAP04437 139 aa13.56□□□□□ -0.24
RABGGTA-208ENST00000558954 H2AFB1P0C5Y9 115 aa13.56□□□□□ -0.24
RABGGTA-208ENST00000558954 EMP1P54849 157 aa13.56□□□□□ -0.24
RABGGTA-208ENST00000558954 NANOS2P60321 138 aaKnown RBP13.56□□□□□ -0.24
RABGGTA-208ENST00000558954 MBD3L1Q8WWY6 194 aa13.56□□□□□ -0.24
RABGGTA-208ENST00000558954 YTHDF2Q9Y5A9 579 aaKnown RBP13.56□□□□□ -0.24
RABGGTA-208ENST00000558954 ARL2-SNX15V9GYD0 113 aa13.56□□□□□ -0.24
RABGGTA-208ENST00000558954 FAM74A7A6NL05 159 aa13.55□□□□□ -0.24
RABGGTA-208ENST00000558954 HTN1P15515 57 aa13.55□□□□□ -0.24
RABGGTA-208ENST00000558954 RNASE4P34096 147 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-208ENST00000558954 BTN1A1Q13410 526 aa13.55□□□□□ -0.24
RABGGTA-208ENST00000558954 CYB561D1Q8N8Q1 229 aa13.55□□□□□ -0.24
RABGGTA-208ENST00000558954 C16orf74Q96GX8 76 aa13.55□□□□□ -0.24
RABGGTA-208ENST00000558954 PYGO2Q9BRQ0 406 aa13.55□□□□□ -0.24
RABGGTA-208ENST00000558954 ATG101Q9BSB4 218 aa13.55□□□□□ -0.24
RABGGTA-208ENST00000558954 CELA1Q9UNI1 258 aa13.55□□□□□ -0.24
RABGGTA-208ENST00000558954 TENM2Q9NT68 2774 aa13.54□□□□□ -0.24
RABGGTA-208ENST00000558954 TRAV8-1A0A0A6YYK1 113 aa13.54□□□□□ -0.24
RABGGTA-208ENST00000558954 IFNA7P01567 189 aa13.54□□□□□ -0.24
RABGGTA-208ENST00000558954 SPART-AS1P0CW21 52 aa13.54□□□□□ -0.24
RABGGTA-208ENST00000558954 SULT1A2P50226 295 aa13.54□□□□□ -0.24
RABGGTA-208ENST00000558954 TMEM263Q8WUH6 116 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-208ENST00000558954 EPDR1Q9UM22 224 aa13.54□□□□□ -0.24
RABGGTA-208ENST00000558954 FBLL1A6NHQ2 334 aaKnown RBP13.53□□□□□ -0.24
RABGGTA-208ENST00000558954 NKX2-5P52952 324 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-208ENST00000558954 PRR9Q5T870 116 aa13.53□□□□□ -0.24
RABGGTA-208ENST00000558954 ZNF493Q6ZR52 646 aa13.53□□□□□ -0.24
RABGGTA-208ENST00000558954 PHLDA1Q8WV24 401 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-208ENST00000558954 NDFIP1Q9BT67 221 aa13.53□□□□□ -0.24
RABGGTA-208ENST00000558954 A0A1B0GV50 99 aa13.52□□□□□ -0.25
RABGGTA-208ENST00000558954 PRM2P04554 102 aa13.52□□□□□ -0.25
RABGGTA-208ENST00000558954 PPT1P50897 306 aa13.52□□□□□ -0.25
RABGGTA-208ENST00000558954 FAM222AQ5U5X8 452 aa13.52□□□□□ -0.25
RABGGTA-208ENST00000558954 CCDC28AQ8IWP9 274 aa13.52□□□□□ -0.25
RABGGTA-208ENST00000558954 TMEM75Q8N9X5 138 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms