RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 TMEM242Q9NWH2 141 aa11.7□□□□□ -0.54
CDC42BPB-203ENST00000558867 PRELID1Q9Y255 219 aa11.7□□□□□ -0.54
CDC42BPB-203ENST00000558867 LY96Q9Y6Y9 160 aa11.7□□□□□ -0.54
CDC42BPB-203ENST00000558867 DNAH6Q9C0G6 4158 aa11.69□□□□□ -0.54
CDC42BPB-203ENST00000558867 IGHV7-4-1A0A0J9YVY3 117 aa11.69□□□□□ -0.54
CDC42BPB-203ENST00000558867 GGTLC3B5MD39 225 aa11.69□□□□□ -0.54
CDC42BPB-203ENST00000558867 C9JCJ5 164 aa11.69□□□□□ -0.54
CDC42BPB-203ENST00000558867 OR10J4P0C629 311 aa11.69□□□□□ -0.54
CDC42BPB-203ENST00000558867 NBEAP1P0C6P0 100 aa11.69□□□□□ -0.54
CDC42BPB-203ENST00000558867 PYYP10082 97 aa11.69□□□□□ -0.54
CDC42BPB-203ENST00000558867 HIST1H1EP10412 219 aaKnown RBP11.69□□□□□ -0.54
CDC42BPB-203ENST00000558867 USF2Q15853 346 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPB-203ENST00000558867 BPIFA4PQ86YQ2 179 aa11.69□□□□□ -0.54
CDC42BPB-203ENST00000558867 ZFAND3Q9H8U3 227 aa11.69□□□□□ -0.54
CDC42BPB-203ENST00000558867 IGHV3OR16-8A0A075B7F1 116 aa11.68□□□□□ -0.54
CDC42BPB-203ENST00000558867 CHEK1O14757 476 aa11.68□□□□□ -0.54
CDC42BPB-203ENST00000558867 MRPS12O15235 138 aaKnown RBP11.68□□□□□ -0.54
CDC42BPB-203ENST00000558867 LYPD1Q8N2G4 141 aa11.68□□□□□ -0.54
CDC42BPB-203ENST00000558867 RPS10P5Q9NQ39 176 aa11.68□□□□□ -0.54
CDC42BPB-203ENST00000558867 IGKV3-7A0A075B6H7 116 aa11.67□□□□□ -0.54
CDC42BPB-203ENST00000558867 TRAV10A0A0B4J240 114 aa11.67□□□□□ -0.54
CDC42BPB-203ENST00000558867 SCO2A0A1W2PP80 73 aa11.67□□□□□ -0.54
CDC42BPB-203ENST00000558867 ZNF98A6NK75 572 aa11.67□□□□□ -0.54
CDC42BPB-203ENST00000558867 DEFB4AO15263 64 aa11.67□□□□□ -0.54
CDC42BPB-203ENST00000558867 NDUFB4O95168 129 aa11.67□□□□□ -0.54
CDC42BPB-203ENST00000558867 IGLC2P0DOY2 106 aa11.67□□□□□ -0.54
CDC42BPB-203ENST00000558867 PDE6HQ13956 83 aa11.67□□□□□ -0.54
CDC42BPB-203ENST00000558867 ZNF124Q15973 351 aa11.67□□□□□ -0.54
CDC42BPB-203ENST00000558867 CTDSP1Q9GZU7 261 aa11.67□□□□□ -0.54
CDC42BPB-203ENST00000558867 RABAC1Q9UI14 185 aa11.67□□□□□ -0.54
CDC42BPB-203ENST00000558867 RPL23P62829 140 aaKnown RBP11.66□□□□□ -0.54
CDC42BPB-203ENST00000558867 SUMO1P63165 101 aaKnown RBP11.66□□□□□ -0.54
CDC42BPB-203ENST00000558867 TOMM20LQ6UXN7 152 aa11.66□□□□□ -0.54
CDC42BPB-203ENST00000558867 STHQ8IWL8 128 aa11.66□□□□□ -0.54
CDC42BPB-203ENST00000558867 GBGT1Q8N5D6 347 aa11.66□□□□□ -0.54
CDC42BPB-203ENST00000558867 ARL6IP6Q8N6S5 226 aa11.66□□□□□ -0.54
CDC42BPB-203ENST00000558867 HIST1H2BAQ96A08 127 aa11.66□□□□□ -0.54
CDC42BPB-203ENST00000558867 GPR82Q96P67 336 aa11.66□□□□□ -0.54
CDC42BPB-203ENST00000558867 ZNF253O75346 499 aa11.65□□□□□ -0.54
CDC42BPB-203ENST00000558867 MIFP14174 115 aa11.65□□□□□ -0.54
CDC42BPB-203ENST00000558867 RPL7P18124 248 aaKnown RBP11.65□□□□□ -0.54
CDC42BPB-203ENST00000558867 TAS2R60P59551 318 aa11.65□□□□□ -0.54
CDC42BPB-203ENST00000558867 ZNF674Q2M3X9 581 aa11.65□□□□□ -0.54
CDC42BPB-203ENST00000558867 C1orf194Q5T5A4 169 aa11.65□□□□□ -0.54
CDC42BPB-203ENST00000558867 CBLN2Q8IUK8 224 aa11.65□□□□□ -0.54
CDC42BPB-203ENST00000558867 C15orf54Q8N8G6 183 aa11.65□□□□□ -0.54
CDC42BPB-203ENST00000558867 TRBV19A0A075B6N1 114 aa11.64□□□□□ -0.55
CDC42BPB-203ENST00000558867 IGHV4-4A0A075B6R2 117 aa11.64□□□□□ -0.55
CDC42BPB-203ENST00000558867 S100A9P06702 114 aaKnown RBP11.64□□□□□ -0.55
CDC42BPB-203ENST00000558867 RPL11P62913 178 aaKnown RBP11.64□□□□□ -0.55
CDC42BPB-203ENST00000558867 TMEM88Q6PEY1 159 aa11.64□□□□□ -0.55
CDC42BPB-203ENST00000558867 TCF24Q7RTU0 167 aa11.64□□□□□ -0.55
CDC42BPB-203ENST00000558867 LINC01551Q86U37 167 aa11.64□□□□□ -0.55
CDC42BPB-203ENST00000558867 C5orf17Q8NAS9 161 aa11.64□□□□□ -0.55
CDC42BPB-203ENST00000558867 OTORQ9NRC9 128 aa11.64□□□□□ -0.55
CDC42BPB-203ENST00000558867 U3KQE9 123 aa11.64□□□□□ -0.55
CDC42BPB-203ENST00000558867 TRBV20OR9-2A0A075B6H5 130 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 IGHV3-49A0A0A0MS15 119 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 TRAV2A0A0B4J234 112 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 PRSS29PA6NIE9 313 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 MT-ND4LP03901 98 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 P0DMU3 169 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 FAM231AP0DMU4 169 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 FAM231CP0DMU5 169 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 CRYBB3P26998 211 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 HLA-DMBP28068 263 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 DEFB131AP59861 70 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 LEMD1Q68G75 181 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 ANAPC16Q96DE5 110 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 SMIM12Q96EX1 92 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 YPEL4Q96NS1 127 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 DERL1Q9BUN8 251 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 ZNF586Q9NXT0 402 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 KLF12Q9Y4X4 402 aa11.63□□□□□ -0.55
CDC42BPB-203ENST00000558867 A0A087X0K7 114 aa11.62□□□□□ -0.55
CDC42BPB-203ENST00000558867 HELTA6NFD8 242 aa11.62□□□□□ -0.55
CDC42BPB-203ENST00000558867 PEX7O00628 323 aa11.62□□□□□ -0.55
CDC42BPB-203ENST00000558867 RPL35P42766 123 aaKnown RBP11.62□□□□□ -0.55
CDC42BPB-203ENST00000558867 ADIRFQ15847 76 aa11.62□□□□□ -0.55
CDC42BPB-203ENST00000558867 MORN3Q6PF18 240 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPB-203ENST00000558867 Q8NAQ8 132 aa11.62□□□□□ -0.55
CDC42BPB-203ENST00000558867 Q9H3A6 140 aa11.62□□□□□ -0.55
CDC42BPB-203ENST00000558867 EPDR1Q9UM22 224 aa11.62□□□□□ -0.55
CDC42BPB-203ENST00000558867 IGHV4-28A0A0C4DH34 117 aa11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 TRBV6-1A0A0K0K1D8 114 aa11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 A0A1B0GVY2 172 aa11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 COLCA2A8K830 154 aa11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 PPP1R2P9O14990 202 aa11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 BUB3O43684 328 aa11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 AKR1C3P42330 323 aa11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 MEOX2P50222 304 aa11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 CNN1P51911 297 aaKnown RBP11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 POM121L12Q8N7R1 296 aa11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 ISOC2Q96AB3 205 aa11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 IGF2BP2-AS1Q96M15 143 aa11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 METTL26Q96S19 204 aa11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 ATG101Q9BSB4 218 aa11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 MS4A6AQ9H2W1 248 aa11.61□□□□□ -0.55
CDC42BPB-203ENST00000558867 IGHV3OR16-13A0A075B7E8 117 aa11.6□□□□□ -0.55
CDC42BPB-203ENST00000558867 IGHV3-74A0A0B4J1X5 117 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms