RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 TMEM128Q5BJH2 165 aa6.59□□□□□ -1.35
SPG11-212ENST00000558790 LCN15Q6UWW0 184 aa6.59□□□□□ -1.35
SPG11-212ENST00000558790 Q6ZTI0 123 aa6.59□□□□□ -1.35
SPG11-212ENST00000558790 CCDC190Q86UF4 302 aa6.59□□□□□ -1.35
SPG11-212ENST00000558790 VSIG2Q96IQ7 327 aa6.59□□□□□ -1.35
SPG11-212ENST00000558790 ARL6Q9H0F7 186 aa6.59□□□□□ -1.35
SPG11-212ENST00000558790 ZNF331Q9NQX6 463 aaPredicted RBP6.59□□□□□ -1.35
SPG11-212ENST00000558790 RABL2AQ9UBK7 228 aaPredicted RBP6.59□□□□□ -1.35
SPG11-212ENST00000558790 RABL2BQ9UNT1 228 aa6.59□□□□□ -1.35
SPG11-212ENST00000558790 LINC00854A0A1B0GVQ3 168 aa6.58□□□□□ -1.36
SPG11-212ENST00000558790 J3KRW8 73 aa6.58□□□□□ -1.36
SPG11-212ENST00000558790 HOXB5P09067 269 aa6.58□□□□□ -1.36
SPG11-212ENST00000558790 RRAS2P62070 204 aaPredicted RBP6.58□□□□□ -1.36
SPG11-212ENST00000558790 SLC38A11Q08AI6 406 aa6.58□□□□□ -1.36
SPG11-212ENST00000558790 PPP1R1AQ13522 171 aa6.58□□□□□ -1.36
SPG11-212ENST00000558790 PATE2Q6UY27 113 aa6.58□□□□□ -1.36
SPG11-212ENST00000558790 FRZBQ92765 325 aa6.58□□□□□ -1.36
SPG11-212ENST00000558790 SLC50A1Q9BRV3 221 aa6.58□□□□□ -1.36
SPG11-212ENST00000558790 ARV1Q9H2C2 271 aa6.58□□□□□ -1.36
SPG11-212ENST00000558790 PTTG2Q9NZH5 202 aa6.58□□□□□ -1.36
SPG11-212ENST00000558790 CCDC59Q9P031 241 aaKnown RBP6.58□□□□□ -1.36
SPG11-212ENST00000558790 RSL24D1Q9UHA3 163 aaKnown RBP6.58□□□□□ -1.36
SPG11-212ENST00000558790 DNAH8Q96JB1 4490 aa6.58□□□□□ -1.36
SPG11-212ENST00000558790 TRAV12-3A0A0B4J271 114 aa6.57□□□□□ -1.36
SPG11-212ENST00000558790 H3BTX0 84 aa6.57□□□□□ -1.36
SPG11-212ENST00000558790 SIVA1O15304 175 aa6.57□□□□□ -1.36
SPG11-212ENST00000558790 SSSCA1O60232 199 aa6.57□□□□□ -1.36
SPG11-212ENST00000558790 NXPH4O95158 308 aa6.57□□□□□ -1.36
SPG11-212ENST00000558790 SFT2D2O95562 160 aa6.57□□□□□ -1.36
SPG11-212ENST00000558790 ANXA7P20073 488 aaKnown RBP6.57□□□□□ -1.36
SPG11-212ENST00000558790 FAUP35544 74 aaKnown RBP6.57□□□□□ -1.36
SPG11-212ENST00000558790 KRTAP10-1P60331 282 aa6.57□□□□□ -1.36
SPG11-212ENST00000558790 SELENOTP62341 195 aa6.57□□□□□ -1.36
SPG11-212ENST00000558790 POLR2GP62487 172 aaKnown RBP eCLIP6.57□□□□□ -1.36
SPG11-212ENST00000558790 DAZ2Q13117 558 aaKnown RBP6.57□□□□□ -1.36
SPG11-212ENST00000558790 ZBTB8BQ8NAP8 495 aaPredicted RBP6.57□□□□□ -1.36
SPG11-212ENST00000558790 DYNC2LI1Q8TCX1 351 aa6.57□□□□□ -1.36
SPG11-212ENST00000558790 TNFRSF18Q9Y5U5 241 aa6.57□□□□□ -1.36
SPG11-212ENST00000558790 LRP2P98164 4655 aa6.57□□□□□ -1.36
SPG11-212ENST00000558790 TRGV2A0A075B6R0 118 aa6.56□□□□□ -1.36
SPG11-212ENST00000558790 K7EPK0 472 aa6.56□□□□□ -1.36
SPG11-212ENST00000558790 LINC00305Q7Z4B0 112 aa6.56□□□□□ -1.36
SPG11-212ENST00000558790 C11orf72Q8NBR9 251 aa6.56□□□□□ -1.36
SPG11-212ENST00000558790 ODF3Q96PU9 254 aa6.56□□□□□ -1.36
SPG11-212ENST00000558790 SOSTQ9BQB4 213 aa6.56□□□□□ -1.36
SPG11-212ENST00000558790 PYGO2Q9BRQ0 406 aa6.56□□□□□ -1.36
SPG11-212ENST00000558790 PSENENQ9NZ42 101 aa6.56□□□□□ -1.36
SPG11-212ENST00000558790 MDFICQ9P1T7 246 aa6.56□□□□□ -1.36
SPG11-212ENST00000558790 A0A087WTM6 91 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 TRGV1A0A0A0MS02 117 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 SMR3BP02814 79 aaPredicted RBP6.55□□□□□ -1.36
SPG11-212ENST00000558790 METTL15P1P0C7V9 234 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 CT45A10P0DMU9 189 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 IGLC2P0DOY2 106 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 TNFSF8P32971 234 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 LEPP41159 167 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 HAMPP81172 84 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 TMEM14EPQ6UXP3 125 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 S100A7AQ86SG5 101 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 ZNF546Q86UE3 836 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 MCFD2Q8NI22 146 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 SLIRPQ9GZT3 109 aaKnown RBP6.55□□□□□ -1.36
SPG11-212ENST00000558790 GSN-AS1Q9NRJ2 163 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 FUT9Q9Y231 359 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 PKHD1L1Q86WI1 4243 aa6.55□□□□□ -1.36
SPG11-212ENST00000558790 FABP12A6NFH5 140 aa6.54□□□□□ -1.36
SPG11-212ENST00000558790 FNDC10F2Z333 226 aa6.54□□□□□ -1.36
SPG11-212ENST00000558790 H3BQ15 152 aa6.54□□□□□ -1.36
SPG11-212ENST00000558790 VAMP2P63027 116 aa6.54□□□□□ -1.36
SPG11-212ENST00000558790 OPCMLQ14982 345 aa6.54□□□□□ -1.36
SPG11-212ENST00000558790 BPIFA4PQ86YQ2 179 aa6.54□□□□□ -1.36
SPG11-212ENST00000558790 TOMM5Q8N4H5 51 aa6.54□□□□□ -1.36
SPG11-212ENST00000558790 ZNF680Q8NEM1 530 aa6.54□□□□□ -1.36
SPG11-212ENST00000558790 ZNF431Q8TF32 576 aaPredicted RBP6.54□□□□□ -1.36
SPG11-212ENST00000558790 TMEM37Q8WXS4 190 aa6.54□□□□□ -1.36
SPG11-212ENST00000558790 SLC25A21Q9BQT8 299 aaPredicted RBP6.54□□□□□ -1.36
SPG11-212ENST00000558790 MRPS26Q9BYN8 205 aaKnown RBP6.54□□□□□ -1.36
SPG11-212ENST00000558790 NPVFQ9HCQ7 196 aa6.54□□□□□ -1.36
SPG11-212ENST00000558790 RNF24Q9Y225 148 aa6.54□□□□□ -1.36
SPG11-212ENST00000558790 PXMP4Q9Y6I8 212 aa6.54□□□□□ -1.36
SPG11-212ENST00000558790 ICOSQ9Y6W8 199 aa6.54□□□□□ -1.36
SPG11-212ENST00000558790 C7orf71A4D174 169 aa6.53□□□□□ -1.36
SPG11-212ENST00000558790 GOSR2O14653 212 aa6.53□□□□□ -1.36
SPG11-212ENST00000558790 AGPAT2O15120 278 aa6.53□□□□□ -1.36
SPG11-212ENST00000558790 COX7A2P2O60397 106 aa6.53□□□□□ -1.36
SPG11-212ENST00000558790 IFNA5P01569 189 aa6.53□□□□□ -1.36
SPG11-212ENST00000558790 AP3S2P59780 193 aa6.53□□□□□ -1.36
SPG11-212ENST00000558790 ARL16Q0P5N6 197 aa6.53□□□□□ -1.36
SPG11-212ENST00000558790 BTN1A1Q13410 526 aa6.53□□□□□ -1.36
SPG11-212ENST00000558790 NFE4Q86UQ8 179 aa6.53□□□□□ -1.36
SPG11-212ENST00000558790 RAB2BQ8WUD1 216 aa6.53□□□□□ -1.36
SPG11-212ENST00000558790 SAT2Q96F10 170 aaPredicted RBP6.53□□□□□ -1.36
SPG11-212ENST00000558790 SMIM8Q96KF7 97 aa6.53□□□□□ -1.36
SPG11-212ENST00000558790 MGST2Q99735 147 aa6.53□□□□□ -1.36
SPG11-212ENST00000558790 LINC00467Q9BRT7 94 aa6.53□□□□□ -1.36
SPG11-212ENST00000558790 RCL1Q9Y2P8 373 aaKnown RBP6.53□□□□□ -1.36
SPG11-212ENST00000558790 C9orf170A2RU37 121 aa6.52□□□□□ -1.37
SPG11-212ENST00000558790 KLLNB2CW77 178 aa6.52□□□□□ -1.37
SPG11-212ENST00000558790 SPINK4O60575 86 aa6.52□□□□□ -1.37
SPG11-212ENST00000558790 ZNF324O75467 553 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms