RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 PRM2P04554 102 aa9□□□□□ -0.97
LRRC28-206ENST00000558471 TSPOP30536 169 aa9□□□□□ -0.97
LRRC28-206ENST00000558471 FGF8P55075 233 aaPredicted RBP9□□□□□ -0.97
LRRC28-206ENST00000558471 ZFP69Q49AA0 526 aa9□□□□□ -0.97
LRRC28-206ENST00000558471 FAM74A1Q5RGS3 127 aa9□□□□□ -0.97
LRRC28-206ENST00000558471 CASC10Q5T4H9 136 aa9□□□□□ -0.97
LRRC28-206ENST00000558471 IQCF2Q8IXL9 164 aa9□□□□□ -0.97
LRRC28-206ENST00000558471 TMED6Q8WW62 240 aa9□□□□□ -0.97
LRRC28-206ENST00000558471 FAM19A4Q96LR4 140 aa9□□□□□ -0.97
LRRC28-206ENST00000558471 TMEM208Q9BTX3 173 aa9□□□□□ -0.97
LRRC28-206ENST00000558471 RBAKDNA6NC62 111 aa8.99□□□□□ -0.97
LRRC28-206ENST00000558471 MAP1LC3B2A6NCE7 125 aa8.99□□□□□ -0.97
LRRC28-206ENST00000558471 UMAD1C9J7I0 102 aa8.99□□□□□ -0.97
LRRC28-206ENST00000558471 LEPP41159 167 aa8.99□□□□□ -0.97
LRRC28-206ENST00000558471 TMEM78Q5T7P6 136 aa8.99□□□□□ -0.97
LRRC28-206ENST00000558471 GFI1BQ5VTD9 330 aa8.99□□□□□ -0.97
LRRC28-206ENST00000558471 C9orf62Q8N4C0 152 aa8.99□□□□□ -0.97
LRRC28-206ENST00000558471 CMTM2Q8TAZ6 248 aa8.99□□□□□ -0.97
LRRC28-206ENST00000558471 LINC01587Q99440 93 aa8.99□□□□□ -0.97
LRRC28-206ENST00000558471 MAP1LC3BQ9GZQ8 125 aa8.99□□□□□ -0.97
LRRC28-206ENST00000558471 ZNF492Q9P255 531 aa8.99□□□□□ -0.97
LRRC28-206ENST00000558471 ZNF705GA8MUZ8 300 aaPredicted RBP8.98□□□□□ -0.97
LRRC28-206ENST00000558471 HBE1P02100 147 aa8.98□□□□□ -0.97
LRRC28-206ENST00000558471 SLC25A5P05141 298 aaKnown RBP8.98□□□□□ -0.97
LRRC28-206ENST00000558471 ZNF138P52744 262 aa8.98□□□□□ -0.97
LRRC28-206ENST00000558471 NANOS2P60321 138 aaKnown RBP8.98□□□□□ -0.97
LRRC28-206ENST00000558471 SUMO1P63165 101 aaKnown RBP8.98□□□□□ -0.97
LRRC28-206ENST00000558471 GNG5P63218 68 aa8.98□□□□□ -0.97
LRRC28-206ENST00000558471 RRN3P1Q2M238 152 aa8.98□□□□□ -0.97
LRRC28-206ENST00000558471 ARL6IP6Q8N6S5 226 aa8.98□□□□□ -0.97
LRRC28-206ENST00000558471 Q8TAT8 98 aa8.98□□□□□ -0.97
LRRC28-206ENST00000558471 C11orf45Q8TAV5 145 aa8.98□□□□□ -0.97
LRRC28-206ENST00000558471 FAM213BQ8TBF2 198 aa8.98□□□□□ -0.97
LRRC28-206ENST00000558471 MBD3L1Q8WWY6 194 aa8.98□□□□□ -0.97
LRRC28-206ENST00000558471 RPH3ALQ9UNE2 315 aa8.98□□□□□ -0.97
LRRC28-206ENST00000558471 TRAV12-3A0A0B4J271 114 aa8.97□□□□□ -0.97
LRRC28-206ENST00000558471 A0A1W2PRE2 83 aa8.97□□□□□ -0.97
LRRC28-206ENST00000558471 KLLNB2CW77 178 aa8.97□□□□□ -0.97
LRRC28-206ENST00000558471 GGTLC3B5MD39 225 aa8.97□□□□□ -0.97
LRRC28-206ENST00000558471 CRISP2P16562 243 aa8.97□□□□□ -0.97
LRRC28-206ENST00000558471 AZU1P20160 251 aa8.97□□□□□ -0.97
LRRC28-206ENST00000558471 EMP1P54849 157 aa8.97□□□□□ -0.97
LRRC28-206ENST00000558471 GOLT1AQ6ZVE7 132 aa8.97□□□□□ -0.97
LRRC28-206ENST00000558471 SLC51BQ86UW2 128 aa8.97□□□□□ -0.97
LRRC28-206ENST00000558471 TMEM256Q8N2U0 113 aa8.97□□□□□ -0.97
LRRC28-206ENST00000558471 ZFAND2AQ8N6M9 145 aa8.97□□□□□ -0.97
LRRC28-206ENST00000558471 C20orf144Q9BQM9 153 aa8.97□□□□□ -0.97
LRRC28-206ENST00000558471 YTHDF2Q9Y5A9 579 aaKnown RBP8.97□□□□□ -0.97
LRRC28-206ENST00000558471 LOC102723971A0A1B0GUV8 181 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 TMEM189A5PLL7 270 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 H7BYZ3 331 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 TCRAP04437 139 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 GPX1P07203 203 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 NMBP08949 121 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 HTN1P15515 57 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 TAS2R60P59551 318 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 UBE2G2P60604 165 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 BTN1A1Q13410 526 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 PMS2P11Q13670 270 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 PRR9Q5T870 116 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 DPPA3Q6W0C5 159 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 C5orf17Q8NAS9 161 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 SFT2D1Q8WV19 159 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 EPDR1Q9UM22 224 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 CELA1Q9UNI1 258 aa8.96□□□□□ -0.98
LRRC28-206ENST00000558471 TRAV8-1A0A0A6YYK1 113 aa8.95□□□□□ -0.98
LRRC28-206ENST00000558471 TRBV7-9A0A0J9YWB2 115 aa8.95□□□□□ -0.98
LRRC28-206ENST00000558471 A0A1B0GV50 99 aa8.95□□□□□ -0.98
LRRC28-206ENST00000558471 C7orf71A4D174 169 aa8.95□□□□□ -0.98
LRRC28-206ENST00000558471 CXorf65A6NEN9 183 aa8.95□□□□□ -0.98
LRRC28-206ENST00000558471 FAM74A7A6NL05 159 aa8.95□□□□□ -0.98
LRRC28-206ENST00000558471 ZNF324O75467 553 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-206ENST00000558471 H2AFB1P0C5Y9 115 aa8.95□□□□□ -0.98
LRRC28-206ENST00000558471 RNASE4P34096 147 aaKnown RBP8.95□□□□□ -0.98
LRRC28-206ENST00000558471 NKX2-5P52952 324 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-206ENST00000558471 EIF5AL1Q6IS14 154 aaKnown RBP8.95□□□□□ -0.98
LRRC28-206ENST00000558471 SGK494Q96LW2 274 aa8.95□□□□□ -0.98
LRRC28-206ENST00000558471 CSMD3Q7Z407 3707 aa8.94□□□□□ -0.98
LRRC28-206ENST00000558471 SULT1A2P50226 295 aa8.94□□□□□ -0.98
LRRC28-206ENST00000558471 C12orf74Q32Q52 190 aa8.94□□□□□ -0.98
LRRC28-206ENST00000558471 Q6ZQT7 251 aa8.94□□□□□ -0.98
LRRC28-206ENST00000558471 ZNF767PQ75MW2 155 aa8.94□□□□□ -0.98
LRRC28-206ENST00000558471 PHLDA1Q8WV24 401 aaPredicted RBP8.94□□□□□ -0.98
LRRC28-206ENST00000558471 TVP23CQ96ET8 276 aa8.94□□□□□ -0.98
LRRC28-206ENST00000558471 NIPSNAP3BQ9BS92 247 aa8.94□□□□□ -0.98
LRRC28-206ENST00000558471 DKK2Q9UBU2 259 aa8.94□□□□□ -0.98
LRRC28-206ENST00000558471 SERTM2A0A1B0GWG4 89 aa8.93□□□□□ -0.98
LRRC28-206ENST00000558471 PLAC8L1A1L4L8 177 aa8.93□□□□□ -0.98
LRRC28-206ENST00000558471 IFNA7P01567 189 aa8.93□□□□□ -0.98
LRRC28-206ENST00000558471 SPART-AS1P0CW21 52 aa8.93□□□□□ -0.98
LRRC28-206ENST00000558471 RAB5CP51148 216 aa8.93□□□□□ -0.98
LRRC28-206ENST00000558471 FAM222AQ5U5X8 452 aa8.93□□□□□ -0.98
LRRC28-206ENST00000558471 CEMP1Q6PRD7 247 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-206ENST00000558471 PYGO2Q9BRQ0 406 aa8.93□□□□□ -0.98
LRRC28-206ENST00000558471 NKX6-2Q9C056 277 aaPredicted RBP8.93□□□□□ -0.98
LRRC28-206ENST00000558471 BOLA1Q9Y3E2 137 aa8.93□□□□□ -0.98
LRRC28-206ENST00000558471 LENEPQ9Y5L5 61 aa8.93□□□□□ -0.98
LRRC28-206ENST00000558471 STARD9Q9P2P6 4700 aa8.92□□□□□ -0.98
LRRC28-206ENST00000558471 K7EQM0 130 aa8.92□□□□□ -0.98
LRRC28-206ENST00000558471 PAGE4O60829 102 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms