RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 CCDC190Q86UF4 302 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 AP3S1Q92572 193 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 YIPF6Q96EC8 236 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 VSIG2Q96IQ7 327 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 PRRT1Q99946 306 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 SHANK2-AS3Q9BTD1 123 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 TMEM70Q9BUB7 260 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 GPR132Q9UNW8 380 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 HIGD1AQ9Y241 93 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 ICOSQ9Y6W8 199 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 LY96Q9Y6Y9 160 aa4.07□□□□□ -1.76
ZEB1-211ENST00000558440 PIGBOS1A0A0B4J2F0 54 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 SMCO3A2RU48 225 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 J3KRW8 73 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 HYPMO75409 117 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 MED6O75586 246 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 IL5P05113 134 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 OR5G3P0C626 314 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 AKAIN1P0CW23 69 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 PRB4P10163 310 aaPredicted RBP4.06□□□□□ -1.76
ZEB1-211ENST00000558440 ANXA7P20073 488 aaKnown RBP4.06□□□□□ -1.76
ZEB1-211ENST00000558440 VBP1P61758 197 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 NCS1P62166 190 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 SSBP1Q04837 148 aaKnown RBP4.06□□□□□ -1.76
ZEB1-211ENST00000558440 ARL16Q0P5N6 197 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 DAZ2Q13117 558 aaKnown RBP4.06□□□□□ -1.76
ZEB1-211ENST00000558440 TMEM182Q6ZP80 229 aaPredicted RBP4.06□□□□□ -1.76
ZEB1-211ENST00000558440 SCGB3A2Q96PL1 93 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 CIB3Q96Q77 187 aaPredicted RBP4.06□□□□□ -1.76
ZEB1-211ENST00000558440 PARD6GQ9BYG4 376 aaPredicted RBP4.06□□□□□ -1.76
ZEB1-211ENST00000558440 CTDSP1Q9GZU7 261 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 RNF24Q9Y225 148 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 PAM16Q9Y3D7 125 aa4.06□□□□□ -1.76
ZEB1-211ENST00000558440 TRGV1A0A0A0MS02 117 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 TRAV12-3A0A0B4J271 114 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 K7EP13 123 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 PSCAO43653 123 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 LINC00869P0C866 280 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 CXCL2P19875 107 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 EVI2AP22794 236 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 LEPP41159 167 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 KRTAP10-5P60370 271 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 MRPS10P82664 201 aaKnown RBP4.05□□□□□ -1.76
ZEB1-211ENST00000558440 GAGE1Q13065 139 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 GAGE4Q13068 117 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 LCN15Q6UWW0 184 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 CYP2G1PQ6ZSU1 146 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 ACOT7LQ6ZUV0 252 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 CLVS1Q8IUQ0 354 aaPredicted RBP4.05□□□□□ -1.76
ZEB1-211ENST00000558440 ZNF680Q8NEM1 530 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 OR51S1Q8NGJ8 323 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 PYGO2Q9BRQ0 406 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 LINC00467Q9BRT7 94 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 SLC50A1Q9BRV3 221 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 SCP2D1Q9UJQ7 156 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 FUT9Q9Y231 359 aa4.05□□□□□ -1.76
ZEB1-211ENST00000558440 A0A087WXM4 84 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 DUXBA0A1W2PPF3 345 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 PMS2P5A8MQ11 134 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 PRSS46E5RG02 174 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 WRBO00258 174 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 SYNGR2O43760 224 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 PITX3O75364 302 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 ZNF324O75467 553 aaPredicted RBP4.04□□□□□ -1.76
ZEB1-211ENST00000558440 SELENOTP62341 195 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 SLAQ13239 276 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 MRPL23Q16540 153 aaKnown RBP4.04□□□□□ -1.76
ZEB1-211ENST00000558440 SPANXN5Q5MJ07 72 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 LYPD5Q6UWN5 251 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 NEGR1Q7Z3B1 354 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 C10orf126Q8N4M7 172 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 DEFB104AQ8WTQ1 72 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 SMIM4Q8WVI0 70 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 FUNDC2Q9BWH2 189 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 ARL6Q9H0F7 186 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 ZNF331Q9NQX6 463 aaPredicted RBP4.04□□□□□ -1.76
ZEB1-211ENST00000558440 GSN-AS1Q9NRJ2 163 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 MCUBQ9NWR8 336 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 PRO0255Q9UI72 69 aa4.04□□□□□ -1.76
ZEB1-211ENST00000558440 STRAPQ9Y3F4 350 aaKnown RBP4.04□□□□□ -1.76
ZEB1-211ENST00000558440 H3BP45 60 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 RGS5O15539 181 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 ATP6V1G2O95670 118 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 IGHV3-53P01767 116 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 CRYGDP07320 174 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 SNRPCP09234 159 aaKnown RBP4.03□□□□□ -1.76
ZEB1-211ENST00000558440 CT45A10P0DMU9 189 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 SLC25A6P12236 298 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 SRIP30626 198 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 PLP1P60201 277 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 BPIFA4PQ86YQ2 179 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 WFDC10BQ8IUB3 73 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 EIF4E3Q8N5X7 224 aaKnown RBP4.03□□□□□ -1.76
ZEB1-211ENST00000558440 ZNF431Q8TF32 576 aaPredicted RBP4.03□□□□□ -1.76
ZEB1-211ENST00000558440 PCNPQ8WW12 178 aaKnown RBP4.03□□□□□ -1.76
ZEB1-211ENST00000558440 ST6GAL2Q96JF0 529 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 ODF3Q96PU9 254 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 ARV1Q9H2C2 271 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 HHLA3Q9XRX5 114 aa4.03□□□□□ -1.76
ZEB1-211ENST00000558440 PXMP4Q9Y6I8 212 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms