RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 TRAV12-2A0A075B6T6 113 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 TRBV7-9A0A0J9YWB2 115 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 RBAKDNA6NC62 111 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 RNF222A6NCQ9 220 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 LYRM9A8MSI8 78 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 M0R3E3 92 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 SLC25A5P05141 298 aaKnown RBP6.08□□□□□ -1.44
TPM1-213ENST00000558400 CT45A10P0DMU9 189 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 ATP6V0CP27449 155 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 EMP1P54849 157 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 UBE2L3P68036 154 aaKnown RBP6.08□□□□□ -1.44
TPM1-213ENST00000558400 C12orf74Q32Q52 190 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 BAP18Q8IXM2 172 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 EXOC3-AS1Q8N2X6 119 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 CMTM2Q8TAZ6 248 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 FAM210BQ96KR6 192 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 NIPSNAP3BQ9BS92 247 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 ACTR3CQ9C0K3 210 aaPredicted RBP6.08□□□□□ -1.44
TPM1-213ENST00000558400 AGPAT4-IT1Q9H0P7 198 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 DKK2Q9UBU2 259 aa6.08□□□□□ -1.44
TPM1-213ENST00000558400 DEFB131BA0A096LNP1 70 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 HMSDA8MTL9 139 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 ZNF705GA8MUZ8 300 aaPredicted RBP6.07□□□□□ -1.44
TPM1-213ENST00000558400 IGLL5B9A064 214 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 GPX1P07203 203 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 HTN1P15515 57 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 CDC34P49427 236 aaPredicted RBP6.07□□□□□ -1.44
TPM1-213ENST00000558400 FAM222AQ5U5X8 452 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 FAM122CQ6P4D5 195 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 Q6ZTC4 211 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 AKAP14Q86UN6 197 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 ZNF503Q96F45 646 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 C16orf74Q96GX8 76 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 PYGO2Q9BRQ0 406 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 Q9H3A6 140 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 OTORQ9NRC9 128 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 YTHDF2Q9Y5A9 579 aaKnown RBP6.07□□□□□ -1.44
TPM1-213ENST00000558400 TIMM8BQ9Y5J9 83 aaPredicted RBP6.07□□□□□ -1.44
TPM1-213ENST00000558400 LENEPQ9Y5L5 61 aa6.07□□□□□ -1.44
TPM1-213ENST00000558400 A0A0D9SG52 128 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 PGPA6NDG6 321 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 ARPC5O15511 151 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 CXorf1O96002 111 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 STAG3L2P0CL84 134 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 STAG3L3P0CL85 134 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 CRISP2P16562 243 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 ZNF138P52744 262 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 RAB2AP61019 212 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 DAD1P61803 113 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 RPL7L1Q6DKI1 246 aaKnown RBP6.06□□□□□ -1.44
TPM1-213ENST00000558400 LGALS9CQ6DKI2 356 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 TMEM263Q8WUH6 116 aaKnown RBP6.06□□□□□ -1.44
TPM1-213ENST00000558400 TMED6Q8WW62 240 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 RAB24Q969Q5 203 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 TMEM167BQ9NRX6 74 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 ZNF492Q9P255 531 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 CELA1Q9UNI1 258 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 FRAS1Q86XX4 4008 aa6.06□□□□□ -1.44
TPM1-213ENST00000558400 TRAV12-3A0A0B4J271 114 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 SERTM2A0A1B0GWG4 89 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 C7orf71A4D174 169 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 KLLNB2CW77 178 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 DIRC3C9JPN6 131 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 G3V3Q6 166 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 LY6G6CO95867 125 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 AZU1P20160 251 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 EIF5AP63241 154 aaKnown RBP6.05□□□□□ -1.44
TPM1-213ENST00000558400 ERCC8Q13216 396 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 ZNF345Q14585 488 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 AKR1C8PQ5T2L2 129 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 GFI1BQ5VTD9 330 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 SUN5Q8TC36 379 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 LINC00476Q8WZB0 136 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 PHYHIPLQ96FC7 376 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 FAM19A4Q96LR4 140 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 HYLS1Q96M11 299 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 VGLL1Q99990 258 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 LINC00467Q9BRT7 94 aa6.05□□□□□ -1.44
TPM1-213ENST00000558400 IGKV2-40A0A087WW87 121 aaPredicted RBP6.04□□□□□ -1.44
TPM1-213ENST00000558400 CTXND1A0A1B0GTU2 59 aa6.04□□□□□ -1.44
TPM1-213ENST00000558400 FBLL1A6NHQ2 334 aaKnown RBP6.04□□□□□ -1.44
TPM1-213ENST00000558400 CBY3A6NI87 242 aa6.04□□□□□ -1.44
TPM1-213ENST00000558400 SNURFLB1AK76 121 aa6.04□□□□□ -1.44
TPM1-213ENST00000558400 K7EQM0 130 aa6.04□□□□□ -1.44
TPM1-213ENST00000558400 ZNF324O75467 553 aaPredicted RBP6.04□□□□□ -1.44
TPM1-213ENST00000558400 IGKV2D-40P01614 121 aaPredicted RBP6.04□□□□□ -1.44
TPM1-213ENST00000558400 ARL14EPLP0DKL9 152 aa6.04□□□□□ -1.44
TPM1-213ENST00000558400 PRB4P10163 310 aaPredicted RBP6.04□□□□□ -1.44
TPM1-213ENST00000558400 GCHFRP30047 84 aa6.04□□□□□ -1.44
TPM1-213ENST00000558400 RNASE4P34096 147 aaKnown RBP6.04□□□□□ -1.44
TPM1-213ENST00000558400 KIR3DS1Q14943 382 aa6.04□□□□□ -1.44
TPM1-213ENST00000558400 KCNRGQ8N5I3 272 aa6.04□□□□□ -1.44
TPM1-213ENST00000558400 RNASE8Q8TDE3 154 aaKnown RBP6.04□□□□□ -1.44
TPM1-213ENST00000558400 ST6GAL2Q96JF0 529 aa6.04□□□□□ -1.44
TPM1-213ENST00000558400 ARPC5LQ9BPX5 153 aa6.04□□□□□ -1.44
TPM1-213ENST00000558400 NDUFAF3Q9BU61 184 aa6.04□□□□□ -1.44
TPM1-213ENST00000558400 NKX6-2Q9C056 277 aaPredicted RBP6.04□□□□□ -1.44
TPM1-213ENST00000558400 APLNQ9ULZ1 77 aa6.04□□□□□ -1.44
TPM1-213ENST00000558400 IGHV4-4A0A075B6R2 117 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 KANTRA0A1W2PQU2 76 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms