RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 ESPL1Q14674 2120 aa9.45□□□□□ -0.9
CSPG4P12-201ENST00000558282 UQCRQO14949 82 aa9.45□□□□□ -0.9
CSPG4P12-201ENST00000558282 LMO1P25800 156 aa9.45□□□□□ -0.9
CSPG4P12-201ENST00000558282 TRBV10-2A0A0K0K1G8 114 aa9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 CRLF1O75462 422 aa9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 FXYD5Q96DB9 178 aa9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 A0A087WWL8 130 aa9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 SS18Q15532 418 aa9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 LRRK1Q38SD2 2015 aa9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 PDCD11Q14690 1871 aaKnown RBP9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 TRAV41A0A0B4J266 112 aa9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 MINOS1Q5TGZ0 78 aa9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 SPATA25Q9BR10 227 aa9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 MINOS1-NBL1R4GNA1 71 aa9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 IGHV1-46P01743 117 aa9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 EFNA4P52798 201 aa9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 MAFAQ8NHW3 353 aaPredicted RBP9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 ZC2HC1AQ96GY0 325 aa9.44□□□□□ -0.9
CSPG4P12-201ENST00000558282 TMEM200BQ69YZ2 307 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 LINC00643Q86TS7 51 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 THAP8Q8NA92 274 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 DOCK11Q5JSL3 2073 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 IGHV1-18A0A0C4DH31 117 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 BSPH1Q075Z2 132 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 ORMDL1Q9P0S3 153 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 hADV29S1A0JD25 119 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 FAM27E3Q08E93 113 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 CASP8AP2Q9UKL3 1982 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 DOPEY2Q9Y3R5 2298 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 H0YGX0 51 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 GGNQ86UU5 652 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 V9GYY9 64 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 DOCK9Q9BZ29 2069 aa9.43□□□□□ -0.9
CSPG4P12-201ENST00000558282 IGHG2P01859 326 aa9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 PSMB8P28062 276 aa9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 HERVK_113P63121 156 aa9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 RHOHQ15669 191 aa9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 TP53BP1Q12888 1972 aaPredicted RBP9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 IGFBPL1Q8WX77 278 aa9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 PRDM6Q9NQX0 595 aa9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 SPATA12Q7Z6I5 190 aa9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 RALGAPA1Q6GYQ0 2036 aa9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 NBASA2RRP1 2371 aa9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 TINCRA0A1B0GVN0 87 aa9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 H3BRN7 92 aa9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 IGLV3-19P01714 112 aa9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 USMG5Q96IX5 58 aa9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 SPANXB1Q9NS25 103 aaPredicted RBP9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 PLA2G2EQ9NZK7 142 aa9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 EP300Q09472 2414 aaPredicted RBP9.42□□□□□ -0.9
CSPG4P12-201ENST00000558282 ABCA1O95477 2261 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 TRAV12-1A0A0B4J245 112 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 UCNP55089 124 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 FAM120AOSQ5T036 256 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 COLCA1Q6ZS62 124 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 METRNQ9UJH8 293 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 TRPM7Q96QT4 1865 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 FAM223BA6NKX1 122 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 PATE3B3GLJ2 98 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 CLPSP04118 112 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 FAM223AQ8IWN6 122 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 PIFOQ8TCI5 191 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 FAM168AQ92567 244 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 ICOSQ9Y6W8 199 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 IGKV1-16P04430 117 aa9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 CSRP1P21291 193 aaKnown RBP9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 MRPL55Q7Z7F7 128 aaKnown RBP9.41□□□□□ -0.9
CSPG4P12-201ENST00000558282 IGHV3-73A0A0B4J1V6 119 aa9.4□□□□□ -0.9
CSPG4P12-201ENST00000558282 NBL1P41271 181 aa9.4□□□□□ -0.9
CSPG4P12-201ENST00000558282 C9orf106Q8NAJ2 232 aa9.4□□□□□ -0.9
CSPG4P12-201ENST00000558282 NCOR1O75376 2440 aa9.4□□□□□ -0.9
CSPG4P12-201ENST00000558282 SPTAN1Q13813 2472 aaKnown RBP9.4□□□□□ -0.9
CSPG4P12-201ENST00000558282 SUMO4Q6EEV6 95 aa9.4□□□□□ -0.9
CSPG4P12-201ENST00000558282 BRK1Q8WUW1 75 aa9.4□□□□□ -0.9
CSPG4P12-201ENST00000558282 LINC00205P59089 165 aa9.4□□□□□ -0.9
CSPG4P12-201ENST00000558282 ARHGEF17Q96PE2 2063 aaPredicted RBP9.4□□□□□ -0.9
CSPG4P12-201ENST00000558282 IGKV1D-17A0A075B6S4 117 aa9.4□□□□□ -0.91
CSPG4P12-201ENST00000558282 H3BQ85 93 aa9.4□□□□□ -0.91
CSPG4P12-201ENST00000558282 ZFP36L1Q07352 338 aaKnown RBP9.4□□□□□ -0.91
CSPG4P12-201ENST00000558282 PRB4P10163 310 aaPredicted RBP9.39□□□□□ -0.91
CSPG4P12-201ENST00000558282 IGFL4Q6B9Z1 124 aa9.39□□□□□ -0.91
CSPG4P12-201ENST00000558282 LINC00173Q6ZV60 143 aa9.39□□□□□ -0.91
CSPG4P12-201ENST00000558282 GAFA1Q96PS6 74 aa9.39□□□□□ -0.91
CSPG4P12-201ENST00000558282 BUB1B-PAK6H3BSN5 160 aa9.39□□□□□ -0.91
CSPG4P12-201ENST00000558282 DEFB104AQ8WTQ1 72 aa9.39□□□□□ -0.91
CSPG4P12-201ENST00000558282 A4D1N5 150 aa9.39□□□□□ -0.91
CSPG4P12-201ENST00000558282 PATJQ8NI35 1801 aa9.38□□□□□ -0.91
CSPG4P12-201ENST00000558282 TRGV1A0A0A0MS02 117 aa9.38□□□□□ -0.91
CSPG4P12-201ENST00000558282 TRAV26-2A0A0B4J265 109 aa9.38□□□□□ -0.91
CSPG4P12-201ENST00000558282 RLFQ13129 1914 aa9.38□□□□□ -0.91
CSPG4P12-201ENST00000558282 M0R1W7 72 aa9.38□□□□□ -0.91
CSPG4P12-201ENST00000558282 DIDO1Q9BTC0 2240 aaKnown RBP9.38□□□□□ -0.91
CSPG4P12-201ENST00000558282 PRSS22Q9GZN4 317 aa9.38□□□□□ -0.91
CSPG4P12-201ENST00000558282 LCTP09848 1927 aa9.38□□□□□ -0.91
CSPG4P12-201ENST00000558282 IGHV3OR16-10A0A075B7F0 116 aa9.38□□□□□ -0.91
CSPG4P12-201ENST00000558282 MT-ATP8P03928 68 aa9.38□□□□□ -0.91
CSPG4P12-201ENST00000558282 EGR2P11161 476 aaPredicted RBP9.38□□□□□ -0.91
CSPG4P12-201ENST00000558282 TET1Q8NFU7 2136 aa9.37□□□□□ -0.91
CSPG4P12-201ENST00000558282 SVIPQ8NHG7 77 aa9.37□□□□□ -0.91
CSPG4P12-201ENST00000558282 LINC00527Q9UJ94 153 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms