RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 ERG28Q9UKR5 140 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 HEY1Q9Y5J3 304 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 CHCHD2Q9Y6H1 151 aaPredicted RBP2.8□□□□□ -1.96
LRRC28-205ENST00000558248 TENM2Q9NT68 2774 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 TENM3Q9P273 2699 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 IGHV3-21A0A0B4J1V1 117 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 A0A1B0GVX0 72 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 OR51F1A6NGY5 319 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 K7ERS5 55 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 PLA2G10O15496 165 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 OR2H2O95918 312 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 HLA-DQB1P01920 261 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 SMIM6P0DI80 62 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 SRIP30626 198 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 EFNA4P52798 201 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 UBA52P62987 128 aaKnown RBP2.79□□□□□ -1.96
LRRC28-205ENST00000558248 CCL20P78556 96 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 BSPH1Q075Z2 132 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 RRN3P1Q2M238 152 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 RPL22L1Q6P5R6 122 aaKnown RBP2.79□□□□□ -1.96
LRRC28-205ENST00000558248 RASL11AQ6T310 242 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 Q8N7P7 452 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 OR4C16Q8NGL9 310 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 LINC01006Q8NI28 216 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 ARL11Q969Q4 196 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 SMIM3Q9BZL3 60 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 YIPF3Q9GZM5 350 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 OR8D2Q9GZM6 311 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 CBLN4Q9NTU7 201 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 FAIMQ9NVQ4 179 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 COA4Q9NYJ1 87 aa2.79□□□□□ -1.96
LRRC28-205ENST00000558248 IGHV1-3A0A0C4DH29 117 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 IGHV3-64DA0A0J9YX35 117 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 TMEM223A0PJW6 202 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 C9orf170A2RU37 121 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 LEUTXA8MZ59 168 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 IGLL5B9A064 214 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 E7EQL1 145 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 UCHL1P09936 223 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 PTHLHP12272 177 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 NFYBP25208 207 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 RPL30P62888 115 aaKnown RBP2.78□□□□□ -1.96
LRRC28-205ENST00000558248 TAF9Q16594 264 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 ZNF678Q5SXM1 525 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 SLC25A34Q6PIV7 304 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 SCIMPQ6UWF3 145 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 AMTNQ6UX39 209 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 HRCT1Q6UXD1 115 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 LCA10Q71F78 164 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 LINC01551Q86U37 167 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 C15orf56Q8N910 161 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 MORN4Q8NDC4 146 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 RPS4Y2Q8TD47 263 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 H1FXQ92522 213 aaKnown RBP2.78□□□□□ -1.96
LRRC28-205ENST00000558248 MAL2Q969L2 176 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 NARS2Q96I59 477 aaKnown RBP2.78□□□□□ -1.96
LRRC28-205ENST00000558248 CARD19Q96LW7 228 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 GPX7Q96SL4 187 aaPredicted RBP2.78□□□□□ -1.96
LRRC28-205ENST00000558248 B9D2Q9BPU9 175 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 SLC25A21Q9BQT8 299 aaPredicted RBP2.78□□□□□ -1.96
LRRC28-205ENST00000558248 NDFIP1Q9BT67 221 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 PDCD10Q9BUL8 212 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 ZNF471Q9BX82 626 aaPredicted RBP2.78□□□□□ -1.96
LRRC28-205ENST00000558248 LINC00470Q9BZP3 86 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 BPESC1Q9GZL8 116 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 EFCAB1Q9HAE3 211 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 C21orf62Q9NYP8 219 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 NAT8Q9UHE5 227 aa2.78□□□□□ -1.96
LRRC28-205ENST00000558248 LOC102725191A0A1B0GVB3 256 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 TRDV1A0A1B0GX56 115 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 I3L521 148 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 LYZL6O75951 148 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 DPM2O94777 84 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 IGF2P01344 180 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 HLA-DQA1P01909 254 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 PRM2P04554 102 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 S100A8P05109 93 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 GIG44P09565 113 aaPredicted RBP2.77□□□□□ -1.97
LRRC28-205ENST00000558248 LINC00869P0C866 280 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 ZNF32P17041 273 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 MDKP21741 143 aaPredicted RBP2.77□□□□□ -1.97
LRRC28-205ENST00000558248 HIST1H2BOP23527 126 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 KDELR1P24390 212 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 HIST1H2BBP33778 126 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 CMC4P56277 68 aaPredicted RBP2.77□□□□□ -1.97
LRRC28-205ENST00000558248 NDUFA6P56556 154 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 HIST1H2BDP58876 126 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 NCS1P62166 190 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 HIST1H2BCP62807 126 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 MYL5Q02045 173 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 HIST2H2BEQ16778 126 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.77□□□□□ -1.97
LRRC28-205ENST00000558248 KPRPQ5T749 579 aaPredicted RBP2.77□□□□□ -1.97
LRRC28-205ENST00000558248 C1orf140Q5VVS0 124 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 KTN1-AS1Q86SY8 53 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 PRR15Q8IV56 129 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 ZNF695Q8IW36 515 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 CEND1Q8N111 149 aa2.77□□□□□ -1.97
LRRC28-205ENST00000558248 OR52R1Q8NGF1 315 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms