RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 LEPP41159 167 aa8.7□□□□□ -1.02
CDK12-203ENST00000558240 TMEM78Q5T7P6 136 aa8.7□□□□□ -1.02
CDK12-203ENST00000558240 TMEM256Q8N2U0 113 aa8.7□□□□□ -1.02
CDK12-203ENST00000558240 CMTM2Q8TAZ6 248 aa8.7□□□□□ -1.02
CDK12-203ENST00000558240 TMED6Q8WW62 240 aa8.7□□□□□ -1.02
CDK12-203ENST00000558240 C20orf144Q9BQM9 153 aa8.7□□□□□ -1.02
CDK12-203ENST00000558240 MAP1LC3BQ9GZQ8 125 aa8.7□□□□□ -1.02
CDK12-203ENST00000558240 TRAV12-2A0A075B6T6 113 aa8.69□□□□□ -1.02
CDK12-203ENST00000558240 IGHV3OR16-12A0A075B7B8 117 aa8.69□□□□□ -1.02
CDK12-203ENST00000558240 IGKV2-40A0A087WW87 121 aaPredicted RBP8.69□□□□□ -1.02
CDK12-203ENST00000558240 IGHV4-28A0A0C4DH34 117 aa8.69□□□□□ -1.02
CDK12-203ENST00000558240 A0A1W2PRE2 83 aa8.69□□□□□ -1.02
CDK12-203ENST00000558240 IGKV2D-40P01614 121 aaPredicted RBP8.69□□□□□ -1.02
CDK12-203ENST00000558240 NMBP08949 121 aa8.69□□□□□ -1.02
CDK12-203ENST00000558240 FHITP49789 147 aa8.69□□□□□ -1.02
CDK12-203ENST00000558240 RAB5CP51148 216 aa8.69□□□□□ -1.02
CDK12-203ENST00000558240 ERCC8Q13216 396 aa8.69□□□□□ -1.02
CDK12-203ENST00000558240 IQCF2Q8IXL9 164 aa8.69□□□□□ -1.02
CDK12-203ENST00000558240 MBD3L1Q8WWY6 194 aa8.69□□□□□ -1.02
CDK12-203ENST00000558240 FAM19A4Q96LR4 140 aa8.69□□□□□ -1.02
CDK12-203ENST00000558240 VGLL1Q99990 258 aa8.69□□□□□ -1.02
CDK12-203ENST00000558240 TMEM208Q9BTX3 173 aa8.69□□□□□ -1.02
CDK12-203ENST00000558240 ZNF492Q9P255 531 aa8.69□□□□□ -1.02
CDK12-203ENST00000558240 TRBV7-9A0A0J9YWB2 115 aa8.68□□□□□ -1.02
CDK12-203ENST00000558240 RBMY1A1P0DJD3 496 aaKnown RBP8.68□□□□□ -1.02
CDK12-203ENST00000558240 RBMY1CP0DJD4 496 aa8.68□□□□□ -1.02
CDK12-203ENST00000558240 CRISP2P16562 243 aa8.68□□□□□ -1.02
CDK12-203ENST00000558240 FGF8P55075 233 aaPredicted RBP8.68□□□□□ -1.02
CDK12-203ENST00000558240 RBMY1FQ15415 496 aaKnown RBP8.68□□□□□ -1.02
CDK12-203ENST00000558240 C5orf17Q8NAS9 161 aa8.68□□□□□ -1.02
CDK12-203ENST00000558240 NKX6-2Q9C056 277 aaPredicted RBP8.68□□□□□ -1.02
CDK12-203ENST00000558240 TMPRSS5Q9H3S3 457 aa8.68□□□□□ -1.02
CDK12-203ENST00000558240 SERTM2A0A1B0GWG4 89 aa8.67□□□□□ -1.02
CDK12-203ENST00000558240 TMEM189A5PLL7 270 aa8.67□□□□□ -1.02
CDK12-203ENST00000558240 KLLNB2CW77 178 aa8.67□□□□□ -1.02
CDK12-203ENST00000558240 DEFB4AO15263 64 aa8.67□□□□□ -1.02
CDK12-203ENST00000558240 HBE1P02100 147 aa8.67□□□□□ -1.02
CDK12-203ENST00000558240 ZNF138P52744 262 aa8.67□□□□□ -1.02
CDK12-203ENST00000558240 SUMO1P63165 101 aaKnown RBP8.67□□□□□ -1.02
CDK12-203ENST00000558240 KIR3DS1Q14943 382 aa8.67□□□□□ -1.02
CDK12-203ENST00000558240 GFI1BQ5VTD9 330 aa8.67□□□□□ -1.02
CDK12-203ENST00000558240 FAM213BQ8TBF2 198 aa8.67□□□□□ -1.02
CDK12-203ENST00000558240 SFT2D1Q8WV19 159 aa8.67□□□□□ -1.02
CDK12-203ENST00000558240 TENM2Q9NT68 2774 aa8.67□□□□□ -1.02
CDK12-203ENST00000558240 LENEPQ9Y5L5 61 aa8.67□□□□□ -1.02
CDK12-203ENST00000558240 FAM74A7A6NL05 159 aa8.66□□□□□ -1.02
CDK12-203ENST00000558240 GGTLC3B5MD39 225 aa8.66□□□□□ -1.02
CDK12-203ENST00000558240 H7BYZ3 331 aa8.66□□□□□ -1.02
CDK12-203ENST00000558240 TCRAP04437 139 aa8.66□□□□□ -1.02
CDK12-203ENST00000558240 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
CDK12-203ENST00000558240 SULT1A2P50226 295 aa8.66□□□□□ -1.02
CDK12-203ENST00000558240 RRN3P1Q2M238 152 aa8.66□□□□□ -1.02
CDK12-203ENST00000558240 GOLT1AQ6ZVE7 132 aa8.66□□□□□ -1.02
CDK12-203ENST00000558240 C11orf45Q8TAV5 145 aa8.66□□□□□ -1.02
CDK12-203ENST00000558240 LINC01587Q99440 93 aa8.66□□□□□ -1.02
CDK12-203ENST00000558240 EPDR1Q9UM22 224 aa8.66□□□□□ -1.02
CDK12-203ENST00000558240 ARL2-SNX15V9GYD0 113 aa8.66□□□□□ -1.02
CDK12-203ENST00000558240 C7orf71A4D174 169 aa8.65□□□□□ -1.02
CDK12-203ENST00000558240 K7EQM0 130 aa8.65□□□□□ -1.02
CDK12-203ENST00000558240 GPX1P07203 203 aa8.65□□□□□ -1.02
CDK12-203ENST00000558240 TAS2R60P59551 318 aa8.65□□□□□ -1.02
CDK12-203ENST00000558240 UBE2G2P60604 165 aa8.65□□□□□ -1.02
CDK12-203ENST00000558240 GNG5P63218 68 aa8.65□□□□□ -1.02
CDK12-203ENST00000558240 CASC10Q5T4H9 136 aa8.65□□□□□ -1.02
CDK12-203ENST00000558240 ZFAND2AQ8N6M9 145 aa8.65□□□□□ -1.02
CDK12-203ENST00000558240 NIPSNAP3BQ9BS92 247 aa8.65□□□□□ -1.02
CDK12-203ENST00000558240 RPH3ALQ9UNE2 315 aa8.65□□□□□ -1.02
CDK12-203ENST00000558240 YTHDF2Q9Y5A9 579 aaKnown RBP8.65□□□□□ -1.02
CDK12-203ENST00000558240 TRAV1-1A0A0B4J248 108 aa8.64□□□□□ -1.03
CDK12-203ENST00000558240 TRAV12-3A0A0B4J271 114 aa8.64□□□□□ -1.03
CDK12-203ENST00000558240 LOC102723971A0A1B0GUV8 181 aa8.64□□□□□ -1.03
CDK12-203ENST00000558240 FBLL1A6NHQ2 334 aaKnown RBP8.64□□□□□ -1.03
CDK12-203ENST00000558240 ZNF705GA8MUZ8 300 aaPredicted RBP8.64□□□□□ -1.03
CDK12-203ENST00000558240 J3KRW8 73 aa8.64□□□□□ -1.03
CDK12-203ENST00000558240 ZNF324O75467 553 aaPredicted RBP8.64□□□□□ -1.03
CDK12-203ENST00000558240 RNASE4P34096 147 aaKnown RBP8.64□□□□□ -1.03
CDK12-203ENST00000558240 PPT1P50897 306 aa8.64□□□□□ -1.03
CDK12-203ENST00000558240 NKX2-5P52952 324 aaPredicted RBP8.64□□□□□ -1.03
CDK12-203ENST00000558240 CYB561D1Q8N8Q1 229 aa8.64□□□□□ -1.03
CDK12-203ENST00000558240 Q8TAT8 98 aa8.64□□□□□ -1.03
CDK12-203ENST00000558240 TCEAL7Q9BRU2 100 aa8.64□□□□□ -1.03
CDK12-203ENST00000558240 ATG101Q9BSB4 218 aa8.64□□□□□ -1.03
CDK12-203ENST00000558240 KMT2CQ8NEZ4 4911 aaKnown RBP8.63□□□□□ -1.03
CDK12-203ENST00000558240 CXorf65A6NEN9 183 aa8.63□□□□□ -1.03
CDK12-203ENST00000558240 TEX46H3BTG2 121 aa8.63□□□□□ -1.03
CDK12-203ENST00000558240 IFNA7P01567 189 aa8.63□□□□□ -1.03
CDK12-203ENST00000558240 BTN1A1Q13410 526 aa8.63□□□□□ -1.03
CDK12-203ENST00000558240 ZNF493Q6ZR52 646 aa8.63□□□□□ -1.03
CDK12-203ENST00000558240 CCDC28AQ8IWP9 274 aa8.63□□□□□ -1.03
CDK12-203ENST00000558240 HIST1H2BAQ96A08 127 aa8.63□□□□□ -1.03
CDK12-203ENST00000558240 PYGO2Q9BRQ0 406 aa8.63□□□□□ -1.03
CDK12-203ENST00000558240 SACSQ9NZJ4 4579 aa8.63□□□□□ -1.03
CDK12-203ENST00000558240 TRAV8-1A0A0A6YYK1 113 aa8.62□□□□□ -1.03
CDK12-203ENST00000558240 TEX48A0A1B0GUV7 120 aa8.62□□□□□ -1.03
CDK12-203ENST00000558240 PRM2P04554 102 aa8.62□□□□□ -1.03
CDK12-203ENST00000558240 SPART-AS1P0CW21 52 aa8.62□□□□□ -1.03
CDK12-203ENST00000558240 HTN1P15515 57 aa8.62□□□□□ -1.03
CDK12-203ENST00000558240 AZU1P20160 251 aa8.62□□□□□ -1.03
CDK12-203ENST00000558240 EMP1P54849 157 aa8.62□□□□□ -1.03
CDK12-203ENST00000558240 NANOS2P60321 138 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms