RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 KRTAP9-3Q9BYQ3 159 aa8.85□□□□□ -0.99
HMGB1P8-201ENST00000558211 SAV1Q9H4B6 383 aaPredicted RBP8.85□□□□□ -0.99
HMGB1P8-201ENST00000558211 CLEC5AQ9NY25 188 aa8.85□□□□□ -0.99
HMGB1P8-201ENST00000558211 RPH3ALQ9UNE2 315 aa8.85□□□□□ -0.99
HMGB1P8-201ENST00000558211 A0A0J9YX75 114 aa8.84□□□□□ -0.99
HMGB1P8-201ENST00000558211 A8MZ25 164 aa8.84□□□□□ -0.99
HMGB1P8-201ENST00000558211 H3BMM0 161 aa8.84□□□□□ -0.99
HMGB1P8-201ENST00000558211 PRELID1Q9Y255 219 aa8.84□□□□□ -0.99
HMGB1P8-201ENST00000558211 SLC25A5P05141 298 aaKnown RBP8.83□□□□□ -1
HMGB1P8-201ENST00000558211 HLA-DRB4P13762 266 aa8.83□□□□□ -1
HMGB1P8-201ENST00000558211 CSN1S1P47710 185 aa8.83□□□□□ -1
HMGB1P8-201ENST00000558211 FXYD7P58549 80 aa8.83□□□□□ -1
HMGB1P8-201ENST00000558211 TRPT1Q86TN4 253 aaKnown RBP8.83□□□□□ -1
HMGB1P8-201ENST00000558211 LYPD1Q8N2G4 141 aa8.83□□□□□ -1
HMGB1P8-201ENST00000558211 OR8A1Q8NGG7 326 aa8.83□□□□□ -1
HMGB1P8-201ENST00000558211 OR10J6PQ8NGY7 276 aa8.83□□□□□ -1
HMGB1P8-201ENST00000558211 CMTM2Q8TAZ6 248 aa8.83□□□□□ -1
HMGB1P8-201ENST00000558211 SUN5Q8TC36 379 aa8.83□□□□□ -1
HMGB1P8-201ENST00000558211 KRTAP4-7Q9BYR0 210 aa8.83□□□□□ -1
HMGB1P8-201ENST00000558211 OTORQ9NRC9 128 aa8.83□□□□□ -1
HMGB1P8-201ENST00000558211 PPP1R14DQ9NXH3 145 aa8.83□□□□□ -1
HMGB1P8-201ENST00000558211 HLA-DRB4X5D2U9 266 aa8.83□□□□□ -1
HMGB1P8-201ENST00000558211 IGKV2-40A0A087WW87 121 aaPredicted RBP8.82□□□□□ -1
HMGB1P8-201ENST00000558211 TEX46H3BTG2 121 aa8.82□□□□□ -1
HMGB1P8-201ENST00000558211 DUSP14O95147 198 aaKnown RBP8.82□□□□□ -1
HMGB1P8-201ENST00000558211 IGKV2D-40P01614 121 aaPredicted RBP8.82□□□□□ -1
HMGB1P8-201ENST00000558211 CNN1P51911 297 aaKnown RBP8.82□□□□□ -1
HMGB1P8-201ENST00000558211 GNG5P63218 68 aa8.82□□□□□ -1
HMGB1P8-201ENST00000558211 CCL20P78556 96 aa8.82□□□□□ -1
HMGB1P8-201ENST00000558211 ERCC8Q13216 396 aa8.82□□□□□ -1
HMGB1P8-201ENST00000558211 HAGHQ16775 308 aa8.82□□□□□ -1
HMGB1P8-201ENST00000558211 CST9LP1Q5W188 147 aa8.82□□□□□ -1
HMGB1P8-201ENST00000558211 TEX261Q6UWH6 196 aa8.82□□□□□ -1
HMGB1P8-201ENST00000558211 LINC00322Q6ZN03 302 aaPredicted RBP8.82□□□□□ -1
HMGB1P8-201ENST00000558211 SBSPONQ8IVN8 264 aa8.82□□□□□ -1
HMGB1P8-201ENST00000558211 MRPL53Q96EL3 112 aaKnown RBP8.82□□□□□ -1
HMGB1P8-201ENST00000558211 YTHDF2Q9Y5A9 579 aaKnown RBP8.82□□□□□ -1
HMGB1P8-201ENST00000558211 A0A087WWL8 130 aa8.81□□□□□ -1
HMGB1P8-201ENST00000558211 PAGE4O60829 102 aa8.81□□□□□ -1
HMGB1P8-201ENST00000558211 IFNA7P01567 189 aa8.81□□□□□ -1
HMGB1P8-201ENST00000558211 HBE1P02100 147 aa8.81□□□□□ -1
HMGB1P8-201ENST00000558211 APOC4P55056 127 aa8.81□□□□□ -1
HMGB1P8-201ENST00000558211 BLOC1S1P78537 153 aa8.81□□□□□ -1
HMGB1P8-201ENST00000558211 ZNF680Q8NEM1 530 aa8.81□□□□□ -1
HMGB1P8-201ENST00000558211 RXFP4Q8TDU9 374 aa8.81□□□□□ -1
HMGB1P8-201ENST00000558211 PCNPQ8WW12 178 aaKnown RBP8.81□□□□□ -1
HMGB1P8-201ENST00000558211 CSTL1Q9H114 145 aa8.81□□□□□ -1
HMGB1P8-201ENST00000558211 SLC35B3Q9H1N7 401 aa8.81□□□□□ -1
HMGB1P8-201ENST00000558211 GNG13Q9P2W3 67 aa8.81□□□□□ -1
HMGB1P8-201ENST00000558211 MEGF8Q7Z7M0 2845 aa8.81□□□□□ -1
HMGB1P8-201ENST00000558211 FBN3Q75N90 2809 aa8.8□□□□□ -1
HMGB1P8-201ENST00000558211 A0A1W2PRE2 83 aa8.8□□□□□ -1
HMGB1P8-201ENST00000558211 KRTAP23-1A1A580 65 aa8.8□□□□□ -1
HMGB1P8-201ENST00000558211 FAM74A7A6NL05 159 aa8.8□□□□□ -1
HMGB1P8-201ENST00000558211 GGTLC3B5MD39 225 aa8.8□□□□□ -1
HMGB1P8-201ENST00000558211 DIRC3C9JPN6 131 aa8.8□□□□□ -1
HMGB1P8-201ENST00000558211 CA1P00915 261 aaPredicted RBP8.8□□□□□ -1
HMGB1P8-201ENST00000558211 GOLT1AQ6ZVE7 132 aa8.8□□□□□ -1
HMGB1P8-201ENST00000558211 VGLL1Q99990 258 aa8.8□□□□□ -1
HMGB1P8-201ENST00000558211 B9D2Q9BPU9 175 aa8.8□□□□□ -1
HMGB1P8-201ENST00000558211 XCL2Q9UBD3 114 aa8.8□□□□□ -1
HMGB1P8-201ENST00000558211 TRAV1-1A0A0B4J248 108 aa8.79□□□□□ -1
HMGB1P8-201ENST00000558211 KIR2DL5BA0A0G2JN68 375 aa8.79□□□□□ -1
HMGB1P8-201ENST00000558211 KIR2DL5BA0A0G2JPC4 375 aa8.79□□□□□ -1
HMGB1P8-201ENST00000558211 J3KRW8 73 aa8.79□□□□□ -1
HMGB1P8-201ENST00000558211 ATP5G3P48201 142 aa8.79□□□□□ -1
HMGB1P8-201ENST00000558211 NUTF2P61970 127 aaKnown RBP8.79□□□□□ -1
HMGB1P8-201ENST00000558211 SPINK13Q1W4C9 94 aa8.79□□□□□ -1
HMGB1P8-201ENST00000558211 MORN3Q6PF18 240 aaPredicted RBP8.79□□□□□ -1
HMGB1P8-201ENST00000558211 KIR2DL5AQ8N109 375 aa8.79□□□□□ -1
HMGB1P8-201ENST00000558211 C5orf17Q8NAS9 161 aa8.79□□□□□ -1
HMGB1P8-201ENST00000558211 KIR2DL5BQ8NHK3 375 aa8.79□□□□□ -1
HMGB1P8-201ENST00000558211 SGK494Q96LW2 274 aa8.79□□□□□ -1
HMGB1P8-201ENST00000558211 AGPAT4-IT1Q9H0P7 198 aa8.79□□□□□ -1
HMGB1P8-201ENST00000558211 RETNQ9HD89 108 aa8.79□□□□□ -1
HMGB1P8-201ENST00000558211 M0R2Z0 102 aa8.78□□□□□ -1
HMGB1P8-201ENST00000558211 CT45A10P0DMU9 189 aa8.78□□□□□ -1
HMGB1P8-201ENST00000558211 PPT1P50897 306 aa8.78□□□□□ -1
HMGB1P8-201ENST00000558211 DEFB135Q30KP9 77 aa8.78□□□□□ -1
HMGB1P8-201ENST00000558211 TMEM78Q5T7P6 136 aa8.78□□□□□ -1
HMGB1P8-201ENST00000558211 EPDR1Q9UM22 224 aa8.78□□□□□ -1
HMGB1P8-201ENST00000558211 TRAV12-2A0A075B6T6 113 aa8.77□□□□□ -1.01
HMGB1P8-201ENST00000558211 UBE2CO00762 179 aa8.77□□□□□ -1.01
HMGB1P8-201ENST00000558211 IFNA1P01562 189 aa8.77□□□□□ -1.01
HMGB1P8-201ENST00000558211 TCRAP04437 139 aa8.77□□□□□ -1.01
HMGB1P8-201ENST00000558211 GIG44P09565 113 aaPredicted RBP8.77□□□□□ -1.01
HMGB1P8-201ENST00000558211 AMTNQ6UX39 209 aa8.77□□□□□ -1.01
HMGB1P8-201ENST00000558211 Q8TAT8 98 aa8.77□□□□□ -1.01
HMGB1P8-201ENST00000558211 LINC00477Q96M19 166 aa8.77□□□□□ -1.01
HMGB1P8-201ENST00000558211 NKX6-2Q9C056 277 aaPredicted RBP8.77□□□□□ -1.01
HMGB1P8-201ENST00000558211 MANBALQ9NQG1 85 aa8.77□□□□□ -1.01
HMGB1P8-201ENST00000558211 IGHV3OR16-12A0A075B7B8 117 aa8.76□□□□□ -1.01
HMGB1P8-201ENST00000558211 TRAV8-1A0A0A6YYK1 113 aa8.76□□□□□ -1.01
HMGB1P8-201ENST00000558211 TRAV34A0A0B4J273 112 aa8.76□□□□□ -1.01
HMGB1P8-201ENST00000558211 A8MTW9 85 aa8.76□□□□□ -1.01
HMGB1P8-201ENST00000558211 C11orf94C9JXX5 98 aa8.76□□□□□ -1.01
HMGB1P8-201ENST00000558211 K7EQM0 130 aa8.76□□□□□ -1.01
HMGB1P8-201ENST00000558211 PTTG1IPP53801 180 aa8.76□□□□□ -1.01
HMGB1P8-201ENST00000558211 C9orf47Q6ZRZ4 202 aa8.76□□□□□ -1.01
HMGB1P8-201ENST00000558211 IL17DQ8TAD2 202 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms