RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PRNTQ86SH4 94 aa12.56□□□□□ -0.4
SNX1-203ENST00000558040 GTSCR1Q86UQ5 136 aa12.56□□□□□ -0.4
SNX1-203ENST00000558040 BAGE2Q86Y30 109 aa12.56□□□□□ -0.4
SNX1-203ENST00000558040 SMIM12Q96EX1 92 aa12.56□□□□□ -0.4
SNX1-203ENST00000558040 SGK494Q96LW2 274 aa12.56□□□□□ -0.4
SNX1-203ENST00000558040 IGF2BP2-AS1Q96M15 143 aa12.56□□□□□ -0.4
SNX1-203ENST00000558040 LINC00477Q96M19 166 aa12.56□□□□□ -0.4
SNX1-203ENST00000558040 VGLL1Q99990 258 aa12.56□□□□□ -0.4
SNX1-203ENST00000558040 SAV1Q9H4B6 383 aaPredicted RBP12.56□□□□□ -0.4
SNX1-203ENST00000558040 ZMAT5Q9UDW3 170 aaKnown RBP12.56□□□□□ -0.4
SNX1-203ENST00000558040 ZFP30Q9Y2G7 519 aa12.56□□□□□ -0.4
SNX1-203ENST00000558040 F6UB75 175 aa12.55□□□□□ -0.4
SNX1-203ENST00000558040 LTAP01374 205 aa12.55□□□□□ -0.4
SNX1-203ENST00000558040 S100A1P23297 94 aa12.55□□□□□ -0.4
SNX1-203ENST00000558040 ZNF138P52744 262 aa12.55□□□□□ -0.4
SNX1-203ENST00000558040 ERCC8Q13216 396 aa12.55□□□□□ -0.4
SNX1-203ENST00000558040 SAPCD1Q5SSQ6 148 aa12.55□□□□□ -0.4
SNX1-203ENST00000558040 AGPAT4-IT1Q9H0P7 198 aa12.55□□□□□ -0.4
SNX1-203ENST00000558040 LY96Q9Y6Y9 160 aa12.55□□□□□ -0.4
SNX1-203ENST00000558040 COL6A5A8TX70 2615 aa12.54□□□□□ -0.4
SNX1-203ENST00000558040 TRBV20OR9-2A0A075B6H5 130 aa12.54□□□□□ -0.4
SNX1-203ENST00000558040 DEFB1P60022 68 aa12.54□□□□□ -0.4
SNX1-203ENST00000558040 PNRC1Q12796 327 aaPredicted RBP12.54□□□□□ -0.4
SNX1-203ENST00000558040 TVP23CQ96ET8 276 aa12.54□□□□□ -0.4
SNX1-203ENST00000558040 PPP1R14DQ9NXH3 145 aa12.54□□□□□ -0.4
SNX1-203ENST00000558040 ZNF492Q9P255 531 aa12.54□□□□□ -0.4
SNX1-203ENST00000558040 LENEPQ9Y5L5 61 aa12.54□□□□□ -0.4
SNX1-203ENST00000558040 APOC3P02656 99 aa12.53□□□□□ -0.4
SNX1-203ENST00000558040 CD7P09564 240 aa12.53□□□□□ -0.4
SNX1-203ENST00000558040 ZNF705DP0CH99 300 aaPredicted RBP12.53□□□□□ -0.4
SNX1-203ENST00000558040 ZNF705BP0CI00 300 aaPredicted RBP12.53□□□□□ -0.4
SNX1-203ENST00000558040 HLA-DRB4P13762 266 aa12.53□□□□□ -0.4
SNX1-203ENST00000558040 Q8TAT8 98 aa12.53□□□□□ -0.4
SNX1-203ENST00000558040 SDF2L1Q9HCN8 221 aa12.53□□□□□ -0.4
SNX1-203ENST00000558040 BIN3Q9NQY0 253 aa12.53□□□□□ -0.4
SNX1-203ENST00000558040 HLA-DRB4X5D2U9 266 aa12.53□□□□□ -0.4
SNX1-203ENST00000558040 TRBV7-9A0A0J9YWB2 115 aa12.52□□□□□ -0.41
SNX1-203ENST00000558040 KNCNA6PVL3 124 aa12.52□□□□□ -0.41
SNX1-203ENST00000558040 OXLD1Q5BKU9 147 aa12.52□□□□□ -0.41
SNX1-203ENST00000558040 ACTL10Q5JWF8 245 aa12.52□□□□□ -0.41
SNX1-203ENST00000558040 GDF5OSQ5U4N7 250 aa12.52□□□□□ -0.41
SNX1-203ENST00000558040 APRG1Q8IVJ8 170 aa12.52□□□□□ -0.41
SNX1-203ENST00000558040 TMEM183AQ8IXX5 376 aa12.52□□□□□ -0.41
SNX1-203ENST00000558040 SVBPQ8N300 66 aa12.52□□□□□ -0.41
SNX1-203ENST00000558040 OR4B1Q8NGF8 309 aa12.52□□□□□ -0.41
SNX1-203ENST00000558040 ODF3Q96PU9 254 aa12.52□□□□□ -0.41
SNX1-203ENST00000558040 PRR25Q96S07 402 aa12.52□□□□□ -0.41
SNX1-203ENST00000558040 STAB1Q9NY15 2570 aa12.51□□□□□ -0.41
SNX1-203ENST00000558040 MGST1P10620 155 aaKnown RBP12.51□□□□□ -0.41
SNX1-203ENST00000558040 ADIRFQ15847 76 aa12.51□□□□□ -0.41
SNX1-203ENST00000558040 LINC01551Q86U37 167 aa12.51□□□□□ -0.41
SNX1-203ENST00000558040 STHQ8IWL8 128 aa12.51□□□□□ -0.41
SNX1-203ENST00000558040 PGPEP1LA6NFU8 196 aa12.5□□□□□ -0.41
SNX1-203ENST00000558040 H3BMM0 161 aa12.5□□□□□ -0.41
SNX1-203ENST00000558040 M0R036 132 aa12.5□□□□□ -0.41
SNX1-203ENST00000558040 CT45A10P0DMU9 189 aa12.5□□□□□ -0.41
SNX1-203ENST00000558040 LEPP41159 167 aa12.5□□□□□ -0.41
SNX1-203ENST00000558040 RPL23P62829 140 aaKnown RBP12.5□□□□□ -0.41
SNX1-203ENST00000558040 NHLRC2Q8NBF2 726 aa12.5□□□□□ -0.41
SNX1-203ENST00000558040 OCC1Q8TAD7 63 aa12.5□□□□□ -0.41
SNX1-203ENST00000558040 MLST8Q9BVC4 326 aa12.5□□□□□ -0.41
SNX1-203ENST00000558040 C19orf73Q9NVV2 129 aa12.5□□□□□ -0.41
SNX1-203ENST00000558040 SNAPINO95295 136 aa12.49□□□□□ -0.41
SNX1-203ENST00000558040 IGLV2-8P01709 118 aa12.49□□□□□ -0.41
SNX1-203ENST00000558040 TSPOP30536 169 aa12.49□□□□□ -0.41
SNX1-203ENST00000558040 EGFEM1PQ0D2K5 195 aa12.49□□□□□ -0.41
SNX1-203ENST00000558040 ZNF124Q15973 351 aa12.49□□□□□ -0.41
SNX1-203ENST00000558040 SMUG1Q53HV7 270 aa12.49□□□□□ -0.41
SNX1-203ENST00000558040 CLUHP3Q96NS8 147 aa12.49□□□□□ -0.41
SNX1-203ENST00000558040 A8MTW9 85 aa12.48□□□□□ -0.41
SNX1-203ENST00000558040 IGKV3-20P01619 116 aa12.48□□□□□ -0.41
SNX1-203ENST00000558040 COX8CQ7Z4L0 72 aa12.48□□□□□ -0.41
SNX1-203ENST00000558040 FAM19A4Q96LR4 140 aa12.48□□□□□ -0.41
SNX1-203ENST00000558040 C8orf49Q96NF6 230 aa12.48□□□□□ -0.41
SNX1-203ENST00000558040 ASCL2Q99929 193 aa12.48□□□□□ -0.41
SNX1-203ENST00000558040 AURKAIP1Q9NWT8 199 aaPredicted RBP12.48□□□□□ -0.41
SNX1-203ENST00000558040 B4DEV8 164 aa12.47□□□□□ -0.41
SNX1-203ENST00000558040 K7EN84 100 aa12.47□□□□□ -0.41
SNX1-203ENST00000558040 GCGP01275 180 aa12.47□□□□□ -0.41
SNX1-203ENST00000558040 CRISP2P16562 243 aa12.47□□□□□ -0.41
SNX1-203ENST00000558040 SAMD5Q5TGI4 173 aa12.47□□□□□ -0.41
SNX1-203ENST00000558040 PRR27Q6MZM9 219 aa12.47□□□□□ -0.41
SNX1-203ENST00000558040 CLRN3Q8NCR9 226 aa12.47□□□□□ -0.41
SNX1-203ENST00000558040 ISOC2Q96AB3 205 aa12.47□□□□□ -0.41
SNX1-203ENST00000558040 ZC2HC1AQ96GY0 325 aa12.47□□□□□ -0.41
SNX1-203ENST00000558040 GPX1P07203 203 aa12.46□□□□□ -0.41
SNX1-203ENST00000558040 NUTF2P61970 127 aaKnown RBP12.46□□□□□ -0.41
SNX1-203ENST00000558040 RHEBQ15382 184 aa12.46□□□□□ -0.41
SNX1-203ENST00000558040 TRPT1Q86TN4 253 aaKnown RBP12.46□□□□□ -0.41
SNX1-203ENST00000558040 WFDC10AQ9H1F0 79 aa12.46□□□□□ -0.41
SNX1-203ENST00000558040 G3V4G9 280 aa12.45□□□□□ -0.42
SNX1-203ENST00000558040 CDKN1BP46527 198 aa12.45□□□□□ -0.42
SNX1-203ENST00000558040 OR5I1Q13606 314 aa12.45□□□□□ -0.42
SNX1-203ENST00000558040 FAM162BQ5T6X4 162 aa12.45□□□□□ -0.42
SNX1-203ENST00000558040 AMTNQ6UX39 209 aa12.45□□□□□ -0.42
SNX1-203ENST00000558040 DEFB125Q8N687 156 aa12.45□□□□□ -0.42
SNX1-203ENST00000558040 ZFAND2AQ8N6M9 145 aa12.45□□□□□ -0.42
SNX1-203ENST00000558040 DAZAP1Q96EP5 407 aaKnown RBP12.45□□□□□ -0.42
SNX1-203ENST00000558040 KLLNB2CW77 178 aa12.44□□□□□ -0.42
SNX1-203ENST00000558040 AMBPP02760 352 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms