RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 ERCC8Q13216 396 aa12.12□□□□□ -0.47
PBX4-202ENST00000557978 C1orf158Q8N1D5 194 aa12.12□□□□□ -0.47
PBX4-202ENST00000557978 TMEM256Q8N2U0 113 aa12.12□□□□□ -0.47
PBX4-202ENST00000557978 Q8NAQ8 132 aa12.12□□□□□ -0.47
PBX4-202ENST00000557978 C20orf144Q9BQM9 153 aa12.12□□□□□ -0.47
PBX4-202ENST00000557978 AGPAT4-IT1Q9H0P7 198 aa12.12□□□□□ -0.47
PBX4-202ENST00000557978 CSMD3Q7Z407 3707 aa12.12□□□□□ -0.47
PBX4-202ENST00000557978 IGKV2-40A0A087WW87 121 aaPredicted RBP12.11□□□□□ -0.47
PBX4-202ENST00000557978 A0A1W2PRE2 83 aa12.11□□□□□ -0.47
PBX4-202ENST00000557978 C3orf84H3BNL1 204 aa12.11□□□□□ -0.47
PBX4-202ENST00000557978 IGKV2D-40P01614 121 aaPredicted RBP12.11□□□□□ -0.47
PBX4-202ENST00000557978 RAB5CP51148 216 aa12.11□□□□□ -0.47
PBX4-202ENST00000557978 FGF8P55075 233 aaPredicted RBP12.11□□□□□ -0.47
PBX4-202ENST00000557978 FAM213BQ8TBF2 198 aa12.11□□□□□ -0.47
PBX4-202ENST00000557978 IGHV4-28A0A0C4DH34 117 aa12.11□□□□□ -0.47
PBX4-202ENST00000557978 FHITP49789 147 aa12.11□□□□□ -0.47
PBX4-202ENST00000557978 C5orf17Q8NAS9 161 aa12.11□□□□□ -0.47
PBX4-202ENST00000557978 MBD3L1Q8WWY6 194 aa12.11□□□□□ -0.47
PBX4-202ENST00000557978 VGLL1Q99990 258 aa12.11□□□□□ -0.47
PBX4-202ENST00000557978 NKX6-2Q9C056 277 aaPredicted RBP12.11□□□□□ -0.47
PBX4-202ENST00000557978 PLA2G2EQ9NZK7 142 aa12.11□□□□□ -0.47
PBX4-202ENST00000557978 ZNF492Q9P255 531 aa12.11□□□□□ -0.47
PBX4-202ENST00000557978 TRBV7-9A0A0J9YWB2 115 aa12.1□□□□□ -0.47
PBX4-202ENST00000557978 SERTM2A0A1B0GWG4 89 aa12.1□□□□□ -0.47
PBX4-202ENST00000557978 K7EQM0 130 aa12.1□□□□□ -0.47
PBX4-202ENST00000557978 HBE1P02100 147 aa12.1□□□□□ -0.47
PBX4-202ENST00000557978 NMBP08949 121 aa12.1□□□□□ -0.47
PBX4-202ENST00000557978 ZNF138P52744 262 aa12.1□□□□□ -0.47
PBX4-202ENST00000557978 SUMO1P63165 101 aaKnown RBP12.1□□□□□ -0.47
PBX4-202ENST00000557978 RRN3P1Q2M238 152 aa12.1□□□□□ -0.47
PBX4-202ENST00000557978 SFT2D1Q8WV19 159 aa12.1□□□□□ -0.47
PBX4-202ENST00000557978 TMPRSS5Q9H3S3 457 aa12.1□□□□□ -0.47
PBX4-202ENST00000557978 RPH3ALQ9UNE2 315 aa12.1□□□□□ -0.47
PBX4-202ENST00000557978 TMEM189A5PLL7 270 aa12.09□□□□□ -0.47
PBX4-202ENST00000557978 DEFB4AO15263 64 aa12.09□□□□□ -0.47
PBX4-202ENST00000557978 H2AFB1P0C5Y9 115 aa12.09□□□□□ -0.47
PBX4-202ENST00000557978 FAM19A4Q96LR4 140 aa12.09□□□□□ -0.47
PBX4-202ENST00000557978 LINC01587Q99440 93 aa12.09□□□□□ -0.47
PBX4-202ENST00000557978 LENEPQ9Y5L5 61 aa12.09□□□□□ -0.47
PBX4-202ENST00000557978 TENM2Q9NT68 2774 aa12.09□□□□□ -0.47
PBX4-202ENST00000557978 GPX1P07203 203 aa12.08□□□□□ -0.48
PBX4-202ENST00000557978 RBMY1A1P0DJD3 496 aaKnown RBP12.08□□□□□ -0.48
PBX4-202ENST00000557978 RBMY1CP0DJD4 496 aa12.08□□□□□ -0.48
PBX4-202ENST00000557978 CRISP2P16562 243 aa12.08□□□□□ -0.48
PBX4-202ENST00000557978 RBMY1FQ15415 496 aaKnown RBP12.08□□□□□ -0.48
PBX4-202ENST00000557978 GFI1BQ5VTD9 330 aa12.08□□□□□ -0.48
PBX4-202ENST00000557978 GOLT1AQ6ZVE7 132 aa12.08□□□□□ -0.48
PBX4-202ENST00000557978 NIPSNAP3BQ9BS92 247 aa12.08□□□□□ -0.48
PBX4-202ENST00000557978 KLLNB2CW77 178 aa12.07□□□□□ -0.48
PBX4-202ENST00000557978 TEX46H3BTG2 121 aa12.07□□□□□ -0.48
PBX4-202ENST00000557978 H7BYZ3 331 aa12.07□□□□□ -0.48
PBX4-202ENST00000557978 J3KRW8 73 aa12.07□□□□□ -0.48
PBX4-202ENST00000557978 TCRAP04437 139 aa12.07□□□□□ -0.48
PBX4-202ENST00000557978 SULT1A2P50226 295 aa12.07□□□□□ -0.48
PBX4-202ENST00000557978 UBE2G2P60604 165 aa12.07□□□□□ -0.48
PBX4-202ENST00000557978 C11orf45Q8TAV5 145 aa12.07□□□□□ -0.48
PBX4-202ENST00000557978 EPDR1Q9UM22 224 aa12.07□□□□□ -0.48
PBX4-202ENST00000557978 ARL2-SNX15V9GYD0 113 aa12.07□□□□□ -0.48
PBX4-202ENST00000557978 C7orf71A4D174 169 aa12.06□□□□□ -0.48
PBX4-202ENST00000557978 FAM74A7A6NL05 159 aa12.06□□□□□ -0.48
PBX4-202ENST00000557978 GGTLC3B5MD39 225 aa12.06□□□□□ -0.48
PBX4-202ENST00000557978 PPT1P50897 306 aa12.06□□□□□ -0.48
PBX4-202ENST00000557978 TAS2R60P59551 318 aa12.06□□□□□ -0.48
PBX4-202ENST00000557978 GNG5P63218 68 aa12.06□□□□□ -0.48
PBX4-202ENST00000557978 KIR3DS1Q14943 382 aa12.06□□□□□ -0.48
PBX4-202ENST00000557978 TRAV12-3A0A0B4J271 114 aa12.05□□□□□ -0.48
PBX4-202ENST00000557978 LOC102723971A0A1B0GUV8 181 aa12.05□□□□□ -0.48
PBX4-202ENST00000557978 IFNA7P01567 189 aa12.05□□□□□ -0.48
PBX4-202ENST00000557978 NKX2-5P52952 324 aaPredicted RBP12.05□□□□□ -0.48
PBX4-202ENST00000557978 Q8TAT8 98 aa12.05□□□□□ -0.48
PBX4-202ENST00000557978 YTHDF2Q9Y5A9 579 aaKnown RBP12.05□□□□□ -0.48
PBX4-202ENST00000557978 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
PBX4-202ENST00000557978 FBLL1A6NHQ2 334 aaKnown RBP12.04□□□□□ -0.48
PBX4-202ENST00000557978 ZFAND2AQ8N6M9 145 aa12.04□□□□□ -0.48
PBX4-202ENST00000557978 CYB561D1Q8N8Q1 229 aa12.04□□□□□ -0.48
PBX4-202ENST00000557978 HIST1H2BAQ96A08 127 aa12.04□□□□□ -0.48
PBX4-202ENST00000557978 PYGO2Q9BRQ0 406 aa12.04□□□□□ -0.48
PBX4-202ENST00000557978 ATG101Q9BSB4 218 aa12.04□□□□□ -0.48
PBX4-202ENST00000557978 TEX48A0A1B0GUV7 120 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 ZNF705GA8MUZ8 300 aaPredicted RBP12.03□□□□□ -0.48
PBX4-202ENST00000557978 F6UZH7 168 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 HTN1P15515 57 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 RNASE4P34096 147 aaKnown RBP12.03□□□□□ -0.48
PBX4-202ENST00000557978 CASC10Q5T4H9 136 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 CCDC28AQ8IWP9 274 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 TCEAL7Q9BRU2 100 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 NDFIP1Q9BT67 221 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 STARD9Q9P2P6 4700 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 TRAV1-1A0A0B4J248 108 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 A0A1B0GV50 99 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 SPART-AS1P0CW21 52 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 EMP1P54849 157 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 BTN1A1Q13410 526 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 CST9LP1Q5W188 147 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 ZFAND6Q6FIF0 208 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 ZNF493Q6ZR52 646 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 TMEM75Q8N9X5 138 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 C16orf74Q96GX8 76 aa12.03□□□□□ -0.48
PBX4-202ENST00000557978 TRAV8-1A0A0A6YYK1 113 aa12.02□□□□□ -0.49
PBX4-202ENST00000557978 PAGE4O60829 102 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms