RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 ETV6P41212 452 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 SMIM21Q3B7S5 101 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 ASB16-AS1Q495Z4 193 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 CCSMST1Q4G0I0 132 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 HSD17B12Q53GQ0 312 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 C1orf134Q5TEV5 83 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 TEX261Q6UWH6 196 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 GLIPR1L1Q6UWM5 242 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 UNQ6190/PRO20217Q6UXQ8 127 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 GKN2Q86XP6 184 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 Q8N2B8 174 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 MMGT1Q8N4V1 131 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 PATE1Q8WXA2 126 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 CLEC2BQ92478 149 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 ZNF625Q96I27 306 aaPredicted RBP0.89□□□□□ -2.27
GPHN-216ENST00000557678 MRPL57Q9BQC6 102 aaKnown RBP0.89□□□□□ -2.27
GPHN-216ENST00000557678 CST11Q9H112 138 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 HSPB8Q9UJY1 196 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 U3KQ87 197 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 PTPRFP10586 1907 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 EXPH5Q8NEV8 1989 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 ERCC6Q03468 1493 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 ALPK3Q96L96 1907 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 SIP14410 1827 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 KIAA1549LQ6ZVL6 1849 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 IGLV3-32A0A0A0MS00 114 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 F8W1H4 67 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 J3QR89 54 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 CCL16O15467 120 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 HCRTO43612 131 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 HBDP02042 147 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 CD2P06729 351 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 COX4I1P13073 169 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 EVI2AP22794 236 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 CNBPP62633 177 aaKnown RBP0.88□□□□□ -2.27
GPHN-216ENST00000557678 QRFPP83859 136 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 DIAPH2-AS1Q14236 149 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 MPV17LQ2QL34 196 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 TMEM14EPQ6UXP3 125 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 CASC2Q6XLA1 102 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 LINC00052Q96N35 136 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 GGACTQ9BVM4 153 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 MGAMO43451 1857 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 CDK5RAP2Q96SN8 1893 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 DISP2A7MBM2 1401 aa0.88□□□□□ -2.27
GPHN-216ENST00000557678 ADGRB2O60241 1585 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 MUC4Q99102 2169 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 TNRC6BQ9UPQ9 1833 aaKnown RBP0.87□□□□□ -2.27
GPHN-216ENST00000557678 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.87□□□□□ -2.27
GPHN-216ENST00000557678 RFX7Q2KHR2 1363 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 TNRC6AQ8NDV7 1962 aaKnown RBP0.87□□□□□ -2.27
GPHN-216ENST00000557678 IGKV3-7A0A075B6H7 116 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 TRBV6-4A0A1B0GX49 114 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 IGKV2-29A2NJV5 120 aaPredicted RBP0.87□□□□□ -2.27
GPHN-216ENST00000557678 IFITM5A6NNB3 132 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 B4DSR2 109 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 H3BRM9 83 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 M0R2N4 97 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 INE1O15225 51 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 NUPR1O60356 82 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 NCR2O95944 276 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 MPC1LP0DKB6 136 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 CCL4P13236 92 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 FOXA3P55318 350 aaPredicted RBP0.87□□□□□ -2.27
GPHN-216ENST00000557678 DNAJB13P59910 316 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 CCDC58Q4VC31 144 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 Q5XG85 94 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 KRTAP26-1Q6PEX3 210 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 LINC00299Q6ZSB3 139 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 ZC2HC1AQ96GY0 325 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 CIB3Q96Q77 187 aaPredicted RBP0.87□□□□□ -2.27
GPHN-216ENST00000557678 TSC22D3Q99576 134 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 BANF2Q9H503 90 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 TPT1P8Q9HAU6 139 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 TAF9BQ9HBM6 251 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 METTL1Q9UBP6 276 aaKnown RBP0.87□□□□□ -2.27
GPHN-216ENST00000557678 MPC1Q9Y5U8 109 aa0.87□□□□□ -2.27
GPHN-216ENST00000557678 CHD3Q12873 2000 aaKnown RBP0.87□□□□□ -2.27
GPHN-216ENST00000557678 MYO18AQ92614 2054 aaKnown RBP0.87□□□□□ -2.27
GPHN-216ENST00000557678 COL1A1P02452 1464 aaPredicted RBP0.86□□□□□ -2.27
GPHN-216ENST00000557678 CECR2Q9BXF3 1484 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 CPDO75976 1380 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 LOC110117498A0A087WWA1 95 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 C3orf85A0A1B0GTC6 90 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 C9orf170A2RU37 121 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 C5orf67F2Z3F1 127 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 M0R2Z0 102 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 GEMIN2O14893 280 aaKnown RBP0.86□□□□□ -2.27
GPHN-216ENST00000557678 SULT1C4O75897 302 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 IGHV3-33P01772 117 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 RBP4P02753 201 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 TCRAP04437 139 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 ARL14EPLP0DKL9 152 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 HLA-DRB4P13762 266 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 CKS2P33552 79 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 KRTAP12-1P59990 96 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 PCBD1P61457 104 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 NCS1P62166 190 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 KRTAP21-3Q3LHN1 58 aa0.86□□□□□ -2.27
GPHN-216ENST00000557678 TMEM244Q5VVB8 128 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms