RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 MORN3Q6PF18 240 aaPredicted RBP15.36■□□□□ 0.05
FOXA1-205ENST00000557418 TRPT1Q86TN4 253 aaKnown RBP15.36■□□□□ 0.05
FOXA1-205ENST00000557418 RYR2Q92736 4967 aa15.36■□□□□ 0.05
FOXA1-205ENST00000557418 NUPR2A6NF83 97 aa15.35■□□□□ 0.05
FOXA1-205ENST00000557418 A8MTW9 85 aa15.35■□□□□ 0.05
FOXA1-205ENST00000557418 ZNF705DP0CH99 300 aaPredicted RBP15.35■□□□□ 0.05
FOXA1-205ENST00000557418 ZNF705BP0CI00 300 aaPredicted RBP15.35■□□□□ 0.05
FOXA1-205ENST00000557418 ATP5G3P48201 142 aa15.35■□□□□ 0.05
FOXA1-205ENST00000557418 C5orf17Q8NAS9 161 aa15.35■□□□□ 0.05
FOXA1-205ENST00000557418 RXFP4Q8TDU9 374 aa15.35■□□□□ 0.05
FOXA1-205ENST00000557418 NKX6-2Q9C056 277 aaPredicted RBP15.35■□□□□ 0.05
FOXA1-205ENST00000557418 DIRC3C9JPN6 131 aa15.34■□□□□ 0.05
FOXA1-205ENST00000557418 SLC25A5P05141 298 aaKnown RBP15.34■□□□□ 0.05
FOXA1-205ENST00000557418 GNG5P63218 68 aa15.34■□□□□ 0.05
FOXA1-205ENST00000557418 CST9LP1Q5W188 147 aa15.34■□□□□ 0.05
FOXA1-205ENST00000557418 EBLN2Q6P2I7 272 aa15.34■□□□□ 0.05
FOXA1-205ENST00000557418 CEMP1Q6PRD7 247 aaPredicted RBP15.34■□□□□ 0.05
FOXA1-205ENST00000557418 EPDR1Q9UM22 224 aa15.34■□□□□ 0.05
FOXA1-205ENST00000557418 DNAH1Q9P2D7 4330 aa15.34■□□□□ 0.05
FOXA1-205ENST00000557418 IGKV2-40A0A087WW87 121 aaPredicted RBP15.33■□□□□ 0.04
FOXA1-205ENST00000557418 RGS13O14921 159 aa15.33■□□□□ 0.04
FOXA1-205ENST00000557418 IGKV2D-40P01614 121 aaPredicted RBP15.33■□□□□ 0.04
FOXA1-205ENST00000557418 BCL2P10415 239 aa15.33■□□□□ 0.04
FOXA1-205ENST00000557418 CSN1S1P47710 185 aa15.33■□□□□ 0.04
FOXA1-205ENST00000557418 CMTM2Q8TAZ6 248 aa15.33■□□□□ 0.04
FOXA1-205ENST00000557418 CLUHP3Q96NS8 147 aa15.33■□□□□ 0.04
FOXA1-205ENST00000557418 NPIPB6E9PJ23 425 aa15.32■□□□□ 0.04
FOXA1-205ENST00000557418 TCRAP04437 139 aa15.32■□□□□ 0.04
FOXA1-205ENST00000557418 CNN1P51911 297 aaKnown RBP15.32■□□□□ 0.04
FOXA1-205ENST00000557418 HIST1H1AQ02539 215 aaPredicted RBP15.32■□□□□ 0.04
FOXA1-205ENST00000557418 CLLU1Q5K131 121 aa15.32■□□□□ 0.04
FOXA1-205ENST00000557418 KLK5Q9Y337 293 aaPredicted RBP15.32■□□□□ 0.04
FOXA1-205ENST00000557418 LOC102723971A0A1B0GUV8 181 aa15.31■□□□□ 0.04
FOXA1-205ENST00000557418 RBAKDNA6NC62 111 aa15.31■□□□□ 0.04
FOXA1-205ENST00000557418 DUSP14O95147 198 aaKnown RBP15.31■□□□□ 0.04
FOXA1-205ENST00000557418 IFNA1P01562 189 aa15.31■□□□□ 0.04
FOXA1-205ENST00000557418 GIG44P09565 113 aaPredicted RBP15.31■□□□□ 0.04
FOXA1-205ENST00000557418 ERCC8Q13216 396 aa15.31■□□□□ 0.04
FOXA1-205ENST00000557418 AMTNQ6UX39 209 aa15.31■□□□□ 0.04
FOXA1-205ENST00000557418 C9orf47Q6ZRZ4 202 aa15.31■□□□□ 0.04
FOXA1-205ENST00000557418 VGLL1Q99990 258 aa15.31■□□□□ 0.04
FOXA1-205ENST00000557418 PLECQ15149 4684 aaKnown RBP15.3■□□□□ 0.04
FOXA1-205ENST00000557418 C11orf94C9JXX5 98 aa15.3■□□□□ 0.04
FOXA1-205ENST00000557418 RAB14P61106 215 aa15.3■□□□□ 0.04
FOXA1-205ENST00000557418 GOLT1AQ6ZVE7 132 aa15.3■□□□□ 0.04
FOXA1-205ENST00000557418 OR10J6PQ8NGY7 276 aa15.3■□□□□ 0.04
FOXA1-205ENST00000557418 C11orf45Q8TAV5 145 aa15.3■□□□□ 0.04
FOXA1-205ENST00000557418 TXNDC17Q9BRA2 123 aa15.3■□□□□ 0.04
FOXA1-205ENST00000557418 TCEAL7Q9BRU2 100 aa15.3■□□□□ 0.04
FOXA1-205ENST00000557418 AGPAT4-IT1Q9H0P7 198 aa15.3■□□□□ 0.04
FOXA1-205ENST00000557418 C11orf68Q9H3H3 251 aaKnown RBP15.3■□□□□ 0.04
FOXA1-205ENST00000557418 RPH3ALQ9UNE2 315 aa15.3■□□□□ 0.04
FOXA1-205ENST00000557418 RBFOX3A6NFN3 312 aa15.29■□□□□ 0.04
FOXA1-205ENST00000557418 DEFB4AO15263 64 aa15.29■□□□□ 0.04
FOXA1-205ENST00000557418 TAGLN2P37802 199 aaKnown RBP15.29■□□□□ 0.04
FOXA1-205ENST00000557418 MEF2BQ02080 365 aaPredicted RBP15.29■□□□□ 0.04
FOXA1-205ENST00000557418 ZNF506Q5JVG8 444 aa15.29■□□□□ 0.04
FOXA1-205ENST00000557418 OR4B1Q8NGF8 309 aa15.29■□□□□ 0.04
FOXA1-205ENST00000557418 PHLDA1Q8WV24 401 aaPredicted RBP15.29■□□□□ 0.04
FOXA1-205ENST00000557418 FAM210AQ96ND0 272 aa15.29■□□□□ 0.04
FOXA1-205ENST00000557418 ATG101Q9BSB4 218 aa15.29■□□□□ 0.04
FOXA1-205ENST00000557418 VAX2Q9UIW0 290 aa15.29■□□□□ 0.04
FOXA1-205ENST00000557418 SERTM2A0A1B0GWG4 89 aa15.28■□□□□ 0.04
FOXA1-205ENST00000557418 PEX7O00628 323 aa15.28■□□□□ 0.04
FOXA1-205ENST00000557418 IGKV3-20P01619 116 aa15.28■□□□□ 0.04
FOXA1-205ENST00000557418 CT45A10P0DMU9 189 aa15.28■□□□□ 0.04
FOXA1-205ENST00000557418 NUTF2P61970 127 aaKnown RBP15.28■□□□□ 0.04
FOXA1-205ENST00000557418 CYB561D1Q8N8Q1 229 aa15.28■□□□□ 0.04
FOXA1-205ENST00000557418 HIST1H2BAQ96A08 127 aa15.28■□□□□ 0.04
FOXA1-205ENST00000557418 SCO2A0A1W2PP80 73 aa15.27■□□□□ 0.04
FOXA1-205ENST00000557418 IGLV2-11P01706 119 aa15.27■□□□□ 0.04
FOXA1-205ENST00000557418 NANOS2P60321 138 aaKnown RBP15.27■□□□□ 0.04
FOXA1-205ENST00000557418 C11orf52Q96A22 123 aa15.27■□□□□ 0.04
FOXA1-205ENST00000557418 FAM19A4Q96LR4 140 aa15.27■□□□□ 0.04
FOXA1-205ENST00000557418 LINC00477Q96M19 166 aa15.27■□□□□ 0.04
FOXA1-205ENST00000557418 TRAV8-1A0A0A6YYK1 113 aa15.26■□□□□ 0.03
FOXA1-205ENST00000557418 TOR2AQ5JU69 321 aa15.26■□□□□ 0.03
FOXA1-205ENST00000557418 C2CD4CQ8TF44 421 aa15.26■□□□□ 0.03
FOXA1-205ENST00000557418 LINC00479Q96M42 142 aa15.26■□□□□ 0.03
FOXA1-205ENST00000557418 ODF3Q96PU9 254 aa15.26■□□□□ 0.03
FOXA1-205ENST00000557418 C1QTNF4Q9BXJ3 329 aa15.26■□□□□ 0.03
FOXA1-205ENST00000557418 PPP1R14DQ9NXH3 145 aa15.26■□□□□ 0.03
FOXA1-205ENST00000557418 ZNF492Q9P255 531 aa15.26■□□□□ 0.03
FOXA1-205ENST00000557418 LY6G6CO95867 125 aa15.25■□□□□ 0.03
FOXA1-205ENST00000557418 MIFP14174 115 aa15.25■□□□□ 0.03
FOXA1-205ENST00000557418 CSNK1G2-AS1Q8NCQ2 148 aa15.25■□□□□ 0.03
FOXA1-205ENST00000557418 SLC35B3Q9H1N7 401 aa15.25■□□□□ 0.03
FOXA1-205ENST00000557418 KLF12Q9Y4X4 402 aa15.25■□□□□ 0.03
FOXA1-205ENST00000557418 TRAV34A0A0B4J273 112 aa15.24■□□□□ 0.03
FOXA1-205ENST00000557418 F6UZH7 168 aa15.24■□□□□ 0.03
FOXA1-205ENST00000557418 ZNF138P52744 262 aa15.24■□□□□ 0.03
FOXA1-205ENST00000557418 TMEM78Q5T7P6 136 aa15.24■□□□□ 0.03
FOXA1-205ENST00000557418 TMEM75Q8N9X5 138 aa15.24■□□□□ 0.03
FOXA1-205ENST00000557418 Q8NAQ8 132 aa15.24■□□□□ 0.03
FOXA1-205ENST00000557418 Q8TAT8 98 aa15.24■□□□□ 0.03
FOXA1-205ENST00000557418 LINC00476Q8WZB0 136 aa15.24■□□□□ 0.03
FOXA1-205ENST00000557418 SGK494Q96LW2 274 aa15.24■□□□□ 0.03
FOXA1-205ENST00000557418 XCL2Q9UBD3 114 aa15.24■□□□□ 0.03
FOXA1-205ENST00000557418 ALMS1Q8TCU4 4167 aa15.23■□□□□ 0.03
FOXA1-205ENST00000557418 IGHV4-28A0A0C4DH34 117 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms