RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CSMD3Q7Z407 3707 aa8.96□□□□□ -0.97
SLIRP-209ENST00000557342 TRAV10A0A0B4J240 114 aa8.96□□□□□ -0.98
SLIRP-209ENST00000557342 H7BYZ3 331 aa8.96□□□□□ -0.98
SLIRP-209ENST00000557342 SLC25A5P05141 298 aaKnown RBP8.96□□□□□ -0.98
SLIRP-209ENST00000557342 STAG3L2P0CL84 134 aa8.96□□□□□ -0.98
SLIRP-209ENST00000557342 STAG3L3P0CL85 134 aa8.96□□□□□ -0.98
SLIRP-209ENST00000557342 EIF5AP63241 154 aaKnown RBP8.96□□□□□ -0.98
SLIRP-209ENST00000557342 TMEM78Q5T7P6 136 aa8.96□□□□□ -0.98
SLIRP-209ENST00000557342 C2CD4CQ8TF44 421 aa8.96□□□□□ -0.98
SLIRP-209ENST00000557342 RAB24Q969Q5 203 aa8.96□□□□□ -0.98
SLIRP-209ENST00000557342 ZNF471Q9BX82 626 aaPredicted RBP8.96□□□□□ -0.98
SLIRP-209ENST00000557342 OTORQ9NRC9 128 aa8.96□□□□□ -0.98
SLIRP-209ENST00000557342 CELA1Q9UNI1 258 aa8.96□□□□□ -0.98
SLIRP-209ENST00000557342 RYR3Q15413 4870 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 RBAKDNA6NC62 111 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 ZNF705GA8MUZ8 300 aaPredicted RBP8.95□□□□□ -0.98
SLIRP-209ENST00000557342 HMGB3O15347 200 aaKnown RBP8.95□□□□□ -0.98
SLIRP-209ENST00000557342 EIF3GO75821 320 aaKnown RBP eCLIP8.95□□□□□ -0.983e-6■□□□□ 9.7
SLIRP-209ENST00000557342 NMBP08949 121 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 ARL14EPLP0DKL9 152 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 TPT1P13693 172 aaKnown RBP8.95□□□□□ -0.98
SLIRP-209ENST00000557342 TCTAP57738 103 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 ERCC8Q13216 396 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 C12orf74Q32Q52 190 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 AKR1C8PQ5T2L2 129 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 FAM222AQ5U5X8 452 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 GFI1BQ5VTD9 330 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 Q6ZTC4 211 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 ARL6IP6Q8N6S5 226 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 CMTM2Q8TAZ6 248 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 NIPSNAP3BQ9BS92 247 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 AGPAT4-IT1Q9H0P7 198 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 DKK2Q9UBU2 259 aa8.95□□□□□ -0.98
SLIRP-209ENST00000557342 YTHDF2Q9Y5A9 579 aaKnown RBP8.95□□□□□ -0.98
SLIRP-209ENST00000557342 STARD9Q9P2P6 4700 aa8.94□□□□□ -0.98
SLIRP-209ENST00000557342 IGKV2-40A0A087WW87 121 aaPredicted RBP8.94□□□□□ -0.98
SLIRP-209ENST00000557342 TRBV7-9A0A0J9YWB2 115 aa8.94□□□□□ -0.98
SLIRP-209ENST00000557342 PGPA6NDG6 321 aa8.94□□□□□ -0.98
SLIRP-209ENST00000557342 J3KRW8 73 aa8.94□□□□□ -0.98
SLIRP-209ENST00000557342 CXorf1O96002 111 aa8.94□□□□□ -0.98
SLIRP-209ENST00000557342 IGKV2D-40P01614 121 aaPredicted RBP8.94□□□□□ -0.98
SLIRP-209ENST00000557342 CRISP2P16562 243 aa8.94□□□□□ -0.98
SLIRP-209ENST00000557342 ZNF493Q6ZR52 646 aa8.94□□□□□ -0.98
SLIRP-209ENST00000557342 CCDC28AQ8IWP9 274 aa8.94□□□□□ -0.98
SLIRP-209ENST00000557342 C16orf74Q96GX8 76 aa8.94□□□□□ -0.98
SLIRP-209ENST00000557342 FAM19A4Q96LR4 140 aa8.94□□□□□ -0.98
SLIRP-209ENST00000557342 VGLL1Q99990 258 aa8.94□□□□□ -0.98
SLIRP-209ENST00000557342 TMEM167BQ9NRX6 74 aa8.94□□□□□ -0.98
SLIRP-209ENST00000557342 ZNF492Q9P255 531 aa8.94□□□□□ -0.98
SLIRP-209ENST00000557342 TRAV12-3A0A0B4J271 114 aa8.93□□□□□ -0.98
SLIRP-209ENST00000557342 CTXND1A0A1B0GTU2 59 aa8.93□□□□□ -0.98
SLIRP-209ENST00000557342 C7orf71A4D174 169 aa8.93□□□□□ -0.98
SLIRP-209ENST00000557342 LYRM9A8MSI8 78 aa8.93□□□□□ -0.98
SLIRP-209ENST00000557342 KLLNB2CW77 178 aa8.93□□□□□ -0.98
SLIRP-209ENST00000557342 DIRC3C9JPN6 131 aa8.93□□□□□ -0.98
SLIRP-209ENST00000557342 GPX1P07203 203 aa8.93□□□□□ -0.98
SLIRP-209ENST00000557342 HTN1P15515 57 aa8.93□□□□□ -0.98
SLIRP-209ENST00000557342 GCHFRP30047 84 aa8.93□□□□□ -0.98
SLIRP-209ENST00000557342 ZNF138P52744 262 aa8.93□□□□□ -0.98
SLIRP-209ENST00000557342 KIR3DS1Q14943 382 aa8.93□□□□□ -0.98
SLIRP-209ENST00000557342 SUN5Q8TC36 379 aa8.93□□□□□ -0.98
SLIRP-209ENST00000557342 TMEM263Q8WUH6 116 aaKnown RBP8.93□□□□□ -0.98
SLIRP-209ENST00000557342 PYGO2Q9BRQ0 406 aa8.93□□□□□ -0.98
SLIRP-209ENST00000557342 DEFB131BA0A096LNP1 70 aa8.92□□□□□ -0.98
SLIRP-209ENST00000557342 AZU1P20160 251 aa8.92□□□□□ -0.98
SLIRP-209ENST00000557342 ZNF767PQ75MW2 155 aa8.92□□□□□ -0.98
SLIRP-209ENST00000557342 TMED6Q8WW62 240 aa8.92□□□□□ -0.98
SLIRP-209ENST00000557342 LENEPQ9Y5L5 61 aa8.92□□□□□ -0.98
SLIRP-209ENST00000557342 SERTM2A0A1B0GWG4 89 aa8.91□□□□□ -0.98
SLIRP-209ENST00000557342 IGLL5B9A064 214 aa8.91□□□□□ -0.98
SLIRP-209ENST00000557342 PRM2P04554 102 aa8.91□□□□□ -0.98
SLIRP-209ENST00000557342 RNASE4P34096 147 aaKnown RBP8.91□□□□□ -0.98
SLIRP-209ENST00000557342 DAD1P61803 113 aa8.91□□□□□ -0.98
SLIRP-209ENST00000557342 IFITM2Q01629 132 aa8.91□□□□□ -0.98
SLIRP-209ENST00000557342 EIF5AL1Q6IS14 154 aaKnown RBP8.91□□□□□ -0.98
SLIRP-209ENST00000557342 TEX261Q6UWH6 196 aa8.91□□□□□ -0.98
SLIRP-209ENST00000557342 IQCF2Q8IXL9 164 aa8.91□□□□□ -0.98
SLIRP-209ENST00000557342 RNASE8Q8TDE3 154 aaKnown RBP8.91□□□□□ -0.98
SLIRP-209ENST00000557342 RPH3ALQ9UNE2 315 aa8.91□□□□□ -0.98
SLIRP-209ENST00000557342 TIMM8BQ9Y5J9 83 aaPredicted RBP8.91□□□□□ -0.98
SLIRP-209ENST00000557342 PLAC8L1A1L4L8 177 aa8.9□□□□□ -0.98
SLIRP-209ENST00000557342 RGS13O14921 159 aa8.9□□□□□ -0.98
SLIRP-209ENST00000557342 ZNF324O75467 553 aaPredicted RBP8.9□□□□□ -0.98
SLIRP-209ENST00000557342 SEC11BP0C7V7 166 aa8.9□□□□□ -0.98
SLIRP-209ENST00000557342 BTN1A1Q13410 526 aa8.9□□□□□ -0.98
SLIRP-209ENST00000557342 ZFAND2AQ8N6M9 145 aa8.9□□□□□ -0.98
SLIRP-209ENST00000557342 C5orf17Q8NAS9 161 aa8.9□□□□□ -0.98
SLIRP-209ENST00000557342 LINC00476Q8WZB0 136 aa8.9□□□□□ -0.98
SLIRP-209ENST00000557342 LINC00467Q9BRT7 94 aa8.9□□□□□ -0.98
SLIRP-209ENST00000557342 A0A1W2PRE2 83 aa8.89□□□□□ -0.99
SLIRP-209ENST00000557342 SNURFLB1AK76 121 aa8.89□□□□□ -0.99
SLIRP-209ENST00000557342 UMAD1C9J7I0 102 aa8.89□□□□□ -0.99
SLIRP-209ENST00000557342 K7EQM0 130 aa8.89□□□□□ -0.99
SLIRP-209ENST00000557342 LY6G6CO95867 125 aa8.89□□□□□ -0.99
SLIRP-209ENST00000557342 IFNA7P01567 189 aa8.89□□□□□ -0.99
SLIRP-209ENST00000557342 ZNF726P1Q15940 193 aa8.89□□□□□ -0.99
SLIRP-209ENST00000557342 GOLT1AQ6ZVE7 132 aa8.89□□□□□ -0.99
SLIRP-209ENST00000557342 SSX7Q7RTT5 188 aa8.89□□□□□ -0.99
SLIRP-209ENST00000557342 ZNF680Q8NEM1 530 aa8.89□□□□□ -0.99
SLIRP-209ENST00000557342 Q8TAT8 98 aa8.89□□□□□ -0.99
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