RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 RNASE4P34096 147 aaKnown RBP11.68□□□□□ -0.54
VSX1-207ENST00000557285 UBE2L3P68036 154 aaKnown RBP11.68□□□□□ -0.54
VSX1-207ENST00000557285 BTN1A1Q13410 526 aa11.68□□□□□ -0.54
VSX1-207ENST00000557285 ZNF493Q6ZR52 646 aa11.68□□□□□ -0.54
VSX1-207ENST00000557285 ODF3Q96PU9 254 aa11.68□□□□□ -0.54
VSX1-207ENST00000557285 VGLL1Q99990 258 aa11.68□□□□□ -0.54
VSX1-207ENST00000557285 IGLV2-18A0A075B6J9 118 aa11.67□□□□□ -0.54
VSX1-207ENST00000557285 C7orf71A4D174 169 aa11.67□□□□□ -0.54
VSX1-207ENST00000557285 ATP5G1P05496 136 aa11.67□□□□□ -0.54
VSX1-207ENST00000557285 ATP5G3P48201 142 aa11.67□□□□□ -0.54
VSX1-207ENST00000557285 RANP62826 216 aaKnown RBP11.67□□□□□ -0.54
VSX1-207ENST00000557285 CD300CQ08708 224 aa11.67□□□□□ -0.54
VSX1-207ENST00000557285 TMEM78Q5T7P6 136 aa11.67□□□□□ -0.54
VSX1-207ENST00000557285 GAGE12BA1L429 117 aa11.66□□□□□ -0.54
VSX1-207ENST00000557285 SNURFLB1AK76 121 aa11.66□□□□□ -0.54
VSX1-207ENST00000557285 GAGE7O76087 117 aa11.66□□□□□ -0.54
VSX1-207ENST00000557285 NUDT3O95989 172 aa11.66□□□□□ -0.54
VSX1-207ENST00000557285 SLC25A5P05141 298 aaKnown RBP11.66□□□□□ -0.54
VSX1-207ENST00000557285 GAGE12FP0CL80 117 aa11.66□□□□□ -0.54
VSX1-207ENST00000557285 GAGE12GP0CL81 117 aa11.66□□□□□ -0.54
VSX1-207ENST00000557285 GAGE12IP0CL82 117 aa11.66□□□□□ -0.54
VSX1-207ENST00000557285 KHDC3LQ587J8 217 aa11.66□□□□□ -0.54
VSX1-207ENST00000557285 Q8TAT8 98 aa11.66□□□□□ -0.54
VSX1-207ENST00000557285 ZNF503Q96F45 646 aa11.66□□□□□ -0.54
VSX1-207ENST00000557285 LINC00477Q96M19 166 aa11.66□□□□□ -0.54
VSX1-207ENST00000557285 CBY3A6NI87 242 aa11.65□□□□□ -0.54
VSX1-207ENST00000557285 HMGB3O15347 200 aaKnown RBP11.65□□□□□ -0.54
VSX1-207ENST00000557285 GPX1P07203 203 aa11.65□□□□□ -0.54
VSX1-207ENST00000557285 TAS2R45P59539 299 aa11.65□□□□□ -0.54
VSX1-207ENST00000557285 HYLS1Q96M11 299 aa11.65□□□□□ -0.54
VSX1-207ENST00000557285 PYGO2Q9BRQ0 406 aa11.65□□□□□ -0.54
VSX1-207ENST00000557285 Q9H3A6 140 aa11.65□□□□□ -0.54
VSX1-207ENST00000557285 RPH3ALQ9UNE2 315 aa11.65□□□□□ -0.54
VSX1-207ENST00000557285 CSN1S1P47710 185 aa11.64□□□□□ -0.55
VSX1-207ENST00000557285 RAB2AP61019 212 aa11.64□□□□□ -0.55
VSX1-207ENST00000557285 ACOT6Q3I5F7 207 aaPredicted RBP11.64□□□□□ -0.55
VSX1-207ENST00000557285 PRR9Q5T870 116 aa11.64□□□□□ -0.55
VSX1-207ENST00000557285 C9orf47Q6ZRZ4 202 aa11.64□□□□□ -0.55
VSX1-207ENST00000557285 ATG101Q9BSB4 218 aa11.64□□□□□ -0.55
VSX1-207ENST00000557285 A0A1W2PPV4 95 aa11.63□□□□□ -0.55
VSX1-207ENST00000557285 KLLNB2CW77 178 aa11.63□□□□□ -0.55
VSX1-207ENST00000557285 OR5I1Q13606 314 aa11.63□□□□□ -0.55
VSX1-207ENST00000557285 Q6ZQT7 251 aa11.63□□□□□ -0.55
VSX1-207ENST00000557285 C15orf53Q8NAA6 179 aa11.63□□□□□ -0.55
VSX1-207ENST00000557285 HSD17B11Q8NBQ5 300 aa11.63□□□□□ -0.55
VSX1-207ENST00000557285 FAM19A4Q96LR4 140 aa11.63□□□□□ -0.55
VSX1-207ENST00000557285 GSN-AS1Q9NRJ2 163 aa11.63□□□□□ -0.55
VSX1-207ENST00000557285 NACAE9PAV3 2078 aa11.63□□□□□ -0.55
VSX1-207ENST00000557285 RGS13O14921 159 aa11.62□□□□□ -0.55
VSX1-207ENST00000557285 M6PRP20645 277 aa11.62□□□□□ -0.55
VSX1-207ENST00000557285 ZNF138P52744 262 aa11.62□□□□□ -0.55
VSX1-207ENST00000557285 Q5BKY6 102 aa11.62□□□□□ -0.55
VSX1-207ENST00000557285 Q6ZTI0 123 aa11.62□□□□□ -0.55
VSX1-207ENST00000557285 ZNF492Q9P255 531 aa11.62□□□□□ -0.55
VSX1-207ENST00000557285 A0A0J9YY99 117 aa11.61□□□□□ -0.55
VSX1-207ENST00000557285 ZNF324O75467 553 aaPredicted RBP11.61□□□□□ -0.55
VSX1-207ENST00000557285 CRISP2P16562 243 aa11.61□□□□□ -0.55
VSX1-207ENST00000557285 ZFAND2AQ8N6M9 145 aa11.61□□□□□ -0.55
VSX1-207ENST00000557285 OR10G4Q8NGN3 311 aa11.61□□□□□ -0.55
VSX1-207ENST00000557285 OR10G9Q8NGN4 311 aa11.61□□□□□ -0.55
VSX1-207ENST00000557285 OR10G7Q8NGN6 311 aa11.61□□□□□ -0.55
VSX1-207ENST00000557285 TMPRSS5Q9H3S3 457 aa11.61□□□□□ -0.55
VSX1-207ENST00000557285 TRGV1A0A0A0MS02 117 aa11.6□□□□□ -0.55
VSX1-207ENST00000557285 EIF4E3Q8N5X7 224 aaKnown RBP11.6□□□□□ -0.55
VSX1-207ENST00000557285 ZNF680Q8NEM1 530 aa11.6□□□□□ -0.55
VSX1-207ENST00000557285 TP53TG3Q9ULZ0 132 aa11.6□□□□□ -0.55
VSX1-207ENST00000557285 TRGV2A0A075B6R0 118 aa11.59□□□□□ -0.55
VSX1-207ENST00000557285 TRAV26-1A0A087WT03 109 aa11.59□□□□□ -0.55
VSX1-207ENST00000557285 FXYD6-FXYD2A0A087WZ82 144 aa11.59□□□□□ -0.55
VSX1-207ENST00000557285 PGPA6NDG6 321 aa11.59□□□□□ -0.55
VSX1-207ENST00000557285 DIRC3C9JPN6 131 aa11.59□□□□□ -0.55
VSX1-207ENST00000557285 HOXA5P20719 270 aa11.59□□□□□ -0.55
VSX1-207ENST00000557285 ZNF266Q14584 549 aa11.59□□□□□ -0.55
VSX1-207ENST00000557285 RNF212Q495C1 297 aa11.59□□□□□ -0.55
VSX1-207ENST00000557285 LYPD1Q8N2G4 141 aa11.59□□□□□ -0.55
VSX1-207ENST00000557285 C11orf72Q8NBR9 251 aa11.59□□□□□ -0.55
VSX1-207ENST00000557285 CMTM2Q8TAZ6 248 aa11.59□□□□□ -0.55
VSX1-207ENST00000557285 AQP10Q96PS8 301 aa11.59□□□□□ -0.55
VSX1-207ENST00000557285 KLF12Q9Y4X4 402 aa11.59□□□□□ -0.55
VSX1-207ENST00000557285 DNAH2Q9P225 4427 aa11.58□□□□□ -0.56
VSX1-207ENST00000557285 HECTD4Q9Y4D8 3996 aa11.58□□□□□ -0.56
VSX1-207ENST00000557285 GIPP09681 153 aaPredicted RBP11.58□□□□□ -0.56
VSX1-207ENST00000557285 CDC34P49427 236 aaPredicted RBP11.58□□□□□ -0.56
VSX1-207ENST00000557285 DAZ2Q13117 558 aaKnown RBP11.58□□□□□ -0.56
VSX1-207ENST00000557285 MUC21Q5SSG8 566 aa11.58□□□□□ -0.56
VSX1-207ENST00000557285 PQLC2Q6ZP29 291 aa11.58□□□□□ -0.56
VSX1-207ENST00000557285 LINC00612Q8N6U2 182 aa11.58□□□□□ -0.56
VSX1-207ENST00000557285 GNPNAT1Q96EK6 184 aaPredicted RBP11.58□□□□□ -0.56
VSX1-207ENST00000557285 ARPC5LQ9BPX5 153 aa11.58□□□□□ -0.56
VSX1-207ENST00000557285 SH3BGRL3Q9H299 93 aa11.58□□□□□ -0.56
VSX1-207ENST00000557285 OTORQ9NRC9 128 aa11.58□□□□□ -0.56
VSX1-207ENST00000557285 IGHV1OR15-1A0A075B7D0 117 aa11.57□□□□□ -0.56
VSX1-207ENST00000557285 NMBP08949 121 aa11.57□□□□□ -0.56
VSX1-207ENST00000557285 ARL14EPLP0DKL9 152 aa11.57□□□□□ -0.56
VSX1-207ENST00000557285 ATP6V0CP27449 155 aa11.57□□□□□ -0.56
VSX1-207ENST00000557285 GNG5P63218 68 aa11.57□□□□□ -0.56
VSX1-207ENST00000557285 RGS21Q2M5E4 152 aa11.57□□□□□ -0.56
VSX1-207ENST00000557285 GOLT1AQ6ZVE7 132 aa11.57□□□□□ -0.56
VSX1-207ENST00000557285 INO80EQ8NBZ0 244 aaPredicted RBP11.57□□□□□ -0.56
VSX1-207ENST00000557285 RXFP4Q8TDU9 374 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms