RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 STAG3L2P0CL84 134 aa16.33■□□□□ 0.2
TDP1-216ENST00000556867 STAG3L3P0CL85 134 aa16.33■□□□□ 0.2
TDP1-216ENST00000556867 ZNF767PQ75MW2 155 aa16.33■□□□□ 0.2
TDP1-216ENST00000556867 HMGB3O15347 200 aaKnown RBP16.32■□□□□ 0.2
TDP1-216ENST00000556867 ARL14EPLP0DKL9 152 aa16.32■□□□□ 0.2
TDP1-216ENST00000556867 CSN1S1P47710 185 aa16.32■□□□□ 0.2
TDP1-216ENST00000556867 ZNF345Q14585 488 aa16.32■□□□□ 0.2
TDP1-216ENST00000556867 LINC00476Q8WZB0 136 aa16.32■□□□□ 0.2
TDP1-216ENST00000556867 RAB24Q969Q5 203 aa16.32■□□□□ 0.2
TDP1-216ENST00000556867 VGLL1Q99990 258 aa16.32■□□□□ 0.2
TDP1-216ENST00000556867 RBAKDNA6NC62 111 aa16.31■□□□□ 0.2
TDP1-216ENST00000556867 KLLNB2CW77 178 aa16.31■□□□□ 0.2
TDP1-216ENST00000556867 SLC25A5P05141 298 aaKnown RBP16.31■□□□□ 0.2
TDP1-216ENST00000556867 CRISP2P16562 243 aa16.31■□□□□ 0.2
TDP1-216ENST00000556867 AZU1P20160 251 aa16.31■□□□□ 0.2
TDP1-216ENST00000556867 TCTAP57738 103 aa16.31■□□□□ 0.2
TDP1-216ENST00000556867 TMEM78Q5T7P6 136 aa16.31■□□□□ 0.2
TDP1-216ENST00000556867 NIPSNAP3BQ9BS92 247 aa16.31■□□□□ 0.2
TDP1-216ENST00000556867 OTORQ9NRC9 128 aa16.31■□□□□ 0.2
TDP1-216ENST00000556867 CYTL1Q9NRR1 136 aa16.31■□□□□ 0.2
TDP1-216ENST00000556867 PLAC8L1A1L4L8 177 aa16.3■□□□□ 0.2
TDP1-216ENST00000556867 HMSDA8MTL9 139 aa16.3■□□□□ 0.2
TDP1-216ENST00000556867 J3KRW8 73 aa16.3■□□□□ 0.2
TDP1-216ENST00000556867 NMBP08949 121 aa16.3■□□□□ 0.2
TDP1-216ENST00000556867 KCNRGQ8N5I3 272 aa16.3■□□□□ 0.2
TDP1-216ENST00000556867 OR11H4Q8NGC9 324 aa16.3■□□□□ 0.2
TDP1-216ENST00000556867 RXFP4Q8TDU9 374 aa16.3■□□□□ 0.2
TDP1-216ENST00000556867 C16orf74Q96GX8 76 aa16.3■□□□□ 0.2
TDP1-216ENST00000556867 ACTR3CQ9C0K3 210 aaPredicted RBP16.3■□□□□ 0.2
TDP1-216ENST00000556867 DEFB131BA0A096LNP1 70 aa16.29■□□□□ 0.2
TDP1-216ENST00000556867 C7orf71A4D174 169 aa16.29■□□□□ 0.2
TDP1-216ENST00000556867 FAM74A1Q5RGS3 127 aa16.29■□□□□ 0.2
TDP1-216ENST00000556867 ZNF492Q9P255 531 aa16.29■□□□□ 0.2
TDP1-216ENST00000556867 TRAV12-3A0A0B4J271 114 aa16.28■□□□□ 0.2
TDP1-216ENST00000556867 TRBV7-9A0A0J9YWB2 115 aa16.28■□□□□ 0.2
TDP1-216ENST00000556867 LYRM9A8MSI8 78 aa16.28■□□□□ 0.2
TDP1-216ENST00000556867 DIRC3C9JPN6 131 aa16.28■□□□□ 0.2
TDP1-216ENST00000556867 HTN1P15515 57 aa16.28■□□□□ 0.2
TDP1-216ENST00000556867 GCHFRP30047 84 aa16.28■□□□□ 0.2
TDP1-216ENST00000556867 ZNF138P52744 262 aa16.28■□□□□ 0.2
TDP1-216ENST00000556867 ZNF493Q6ZR52 646 aa16.28■□□□□ 0.2
TDP1-216ENST00000556867 ZFAND2AQ8N6M9 145 aa16.28■□□□□ 0.2
TDP1-216ENST00000556867 ARL6IP6Q8N6S5 226 aa16.28■□□□□ 0.2
TDP1-216ENST00000556867 SUN5Q8TC36 379 aa16.28■□□□□ 0.2
TDP1-216ENST00000556867 RNASE8Q8TDE3 154 aaKnown RBP16.28■□□□□ 0.2
TDP1-216ENST00000556867 TMEM263Q8WUH6 116 aaKnown RBP16.28■□□□□ 0.2
TDP1-216ENST00000556867 HYDINQ4G0P3 5121 aa16.27■□□□□ 0.2
TDP1-216ENST00000556867 PGPA6NDG6 321 aa16.27■□□□□ 0.2
TDP1-216ENST00000556867 IGLL5B9A064 214 aa16.27■□□□□ 0.2
TDP1-216ENST00000556867 CMTM2Q8TAZ6 248 aa16.27■□□□□ 0.2
TDP1-216ENST00000556867 ARPC5LQ9BPX5 153 aa16.27■□□□□ 0.2
TDP1-216ENST00000556867 PYGO2Q9BRQ0 406 aa16.27■□□□□ 0.2
TDP1-216ENST00000556867 CXorf1O96002 111 aa16.26■□□□□ 0.19
TDP1-216ENST00000556867 BTN1A1Q13410 526 aa16.26■□□□□ 0.19
TDP1-216ENST00000556867 SSX7Q7RTT5 188 aa16.26■□□□□ 0.19
TDP1-216ENST00000556867 Q8TAT8 98 aa16.26■□□□□ 0.19
TDP1-216ENST00000556867 HYLS1Q96M11 299 aa16.26■□□□□ 0.19
TDP1-216ENST00000556867 PLA2G2EQ9NZK7 142 aa16.26■□□□□ 0.19
TDP1-216ENST00000556867 A0A0D9SG52 128 aa16.25■□□□□ 0.19
TDP1-216ENST00000556867 DAD1P61803 113 aa16.25■□□□□ 0.19
TDP1-216ENST00000556867 CD300CQ08708 224 aa16.25■□□□□ 0.19
TDP1-216ENST00000556867 ZNF726P1Q15940 193 aa16.25■□□□□ 0.19
TDP1-216ENST00000556867 AKR1C8PQ5T2L2 129 aa16.25■□□□□ 0.19
TDP1-216ENST00000556867 Q6ZNX1 250 aa16.25■□□□□ 0.19
TDP1-216ENST00000556867 CCDC28AQ8IWP9 274 aa16.25■□□□□ 0.19
TDP1-216ENST00000556867 TMEM167BQ9NRX6 74 aa16.25■□□□□ 0.19
TDP1-216ENST00000556867 APLNQ9ULZ1 77 aa16.25■□□□□ 0.19
TDP1-216ENST00000556867 IGHV4-4A0A075B6R2 117 aa16.24■□□□□ 0.19
TDP1-216ENST00000556867 CTXND1A0A1B0GTU2 59 aa16.24■□□□□ 0.19
TDP1-216ENST00000556867 ZNF324O75467 553 aaPredicted RBP16.24■□□□□ 0.19
TDP1-216ENST00000556867 LY6G6CO95867 125 aa16.24■□□□□ 0.19
TDP1-216ENST00000556867 GPX1P07203 203 aa16.24■□□□□ 0.19
TDP1-216ENST00000556867 RNASE4P34096 147 aaKnown RBP16.24■□□□□ 0.19
TDP1-216ENST00000556867 TMED6Q8WW62 240 aa16.24■□□□□ 0.19
TDP1-216ENST00000556867 LINC00467Q9BRT7 94 aa16.24■□□□□ 0.19
TDP1-216ENST00000556867 TIMM8BQ9Y5J9 83 aaPredicted RBP16.24■□□□□ 0.19
TDP1-216ENST00000556867 LENEPQ9Y5L5 61 aa16.24■□□□□ 0.19
TDP1-216ENST00000556867 PRR9Q5T870 116 aa16.23■□□□□ 0.19
TDP1-216ENST00000556867 ST6GAL2Q96JF0 529 aa16.23■□□□□ 0.19
TDP1-216ENST00000556867 BCL2L11O43521 198 aa16.22■□□□□ 0.19
TDP1-216ENST00000556867 LGALS9CQ6DKI2 356 aa16.22■□□□□ 0.19
TDP1-216ENST00000556867 GOLT1AQ6ZVE7 132 aa16.22■□□□□ 0.19
TDP1-216ENST00000556867 RPH3ALQ9UNE2 315 aa16.22■□□□□ 0.19
TDP1-216ENST00000556867 C5orf17Q8NAS9 161 aa16.21■□□□□ 0.19
TDP1-216ENST00000556867 KANTRA0A1W2PQU2 76 aa16.2■□□□□ 0.18
TDP1-216ENST00000556867 GNG5P63218 68 aa16.2■□□□□ 0.18
TDP1-216ENST00000556867 TCTE3Q8IZS6 198 aa16.2■□□□□ 0.18
TDP1-216ENST00000556867 FAM210BQ96KR6 192 aa16.2■□□□□ 0.18
TDP1-216ENST00000556867 NOP10Q9NPE3 64 aaKnown RBP16.2■□□□□ 0.18
TDP1-216ENST00000556867 SERTM2A0A1B0GWG4 89 aa16.19■□□□□ 0.18
TDP1-216ENST00000556867 GGTLC3B5MD39 225 aa16.19■□□□□ 0.18
TDP1-216ENST00000556867 DEFB130BP0DP73 79 aa16.19■□□□□ 0.18
TDP1-216ENST00000556867 DEFB130AP0DP74 79 aa16.19■□□□□ 0.18
TDP1-216ENST00000556867 ANXA2RQ3ZCQ2 193 aa16.19■□□□□ 0.18
TDP1-216ENST00000556867 IQCF2Q8IXL9 164 aa16.19■□□□□ 0.18
TDP1-216ENST00000556867 ZNF471Q9BX82 626 aaPredicted RBP16.19■□□□□ 0.18
TDP1-216ENST00000556867 SEC11BP0C7V7 166 aa16.18■□□□□ 0.18
TDP1-216ENST00000556867 HTN3P15516 51 aa16.18■□□□□ 0.18
TDP1-216ENST00000556867 EIF4E3Q8N5X7 224 aaKnown RBP16.18■□□□□ 0.18
TDP1-216ENST00000556867 ZNF680Q8NEM1 530 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms