RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 OR52E5Q8NH55 327 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 PBDC1Q9BVG4 233 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 RPRMQ9NS64 109 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 COMMD3Q9UBI1 195 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 ANAPC10Q9UM13 185 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 C14orf166Q9Y224 244 aaKnown RBP3.27□□□□□ -1.89
HIF1A-209ENST00000556827 CSMD3Q7Z407 3707 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 PIGBOS1A0A0B4J2F0 54 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 LYRM9A8MSI8 78 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 FAM25AB3EWG3 89 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 FAM25CB3EWG5 89 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 FAM25GB3EWG6 89 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 F5H768 121 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 ISLRO14498 428 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 IGKV1-5P01602 117 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 APOA1P02647 267 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 IGLC1P0CG04 106 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 DEFB130BP0DP73 79 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 DEFB130AP0DP74 79 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 GALR1P47211 349 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 ATP5IP56385 69 aaPredicted RBP3.26□□□□□ -1.89
HIF1A-209ENST00000556827 FXYD7P58549 80 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 SP6Q3SY56 376 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 SCGB2B2Q4G0G5 96 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 TTC32Q5I0X7 151 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 C1orf194Q5T5A4 169 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 FAM78BQ5VT40 261 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 PRSS54Q6PEW0 395 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 S100A7AQ86SG5 101 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 OR8I2Q8N0Y5 310 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 C6orf223Q8N319 242 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 TMEM252Q8N6L7 170 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 OR4C16Q8NGL9 310 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 TERB2Q8NHR7 220 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 GPX8Q8TED1 209 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 TP53RKQ96S44 253 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 SAV1Q9H4B6 383 aaPredicted RBP3.26□□□□□ -1.89
HIF1A-209ENST00000556827 KCNIP3Q9Y2W7 256 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 YTHDF2Q9Y5A9 579 aaKnown RBP3.26□□□□□ -1.89
HIF1A-209ENST00000556827 U3KQ87 197 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 HUWE1Q7Z6Z7 4374 aaKnown RBP3.26□□□□□ -1.89
HIF1A-209ENST00000556827 RYR2Q92736 4967 aa3.26□□□□□ -1.89
HIF1A-209ENST00000556827 BIRC6Q9NR09 4857 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 DYNC2H1Q8NCM8 4307 aaKnown RBP3.25□□□□□ -1.89
HIF1A-209ENST00000556827 A0A0J9YXY3 114 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 NBDYA0A0U1RRE5 68 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 ADAP1O75689 374 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 RAB3DO95716 219 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 CFDP00746 253 aaPredicted RBP3.25□□□□□ -1.89
HIF1A-209ENST00000556827 INSP01308 110 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 ATP5G1P05496 136 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 SULT1A3P0DMM9 295 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 SULT1A4P0DMN0 295 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 ATP5G3P48201 142 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 RORCP51449 518 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 KRTAP10-1P60331 282 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 LSM3P62310 102 aaKnown RBP3.25□□□□□ -1.89
HIF1A-209ENST00000556827 SUPT4H1P63272 117 aaKnown RBP3.25□□□□□ -1.89
HIF1A-209ENST00000556827 USF2Q15853 346 aaPredicted RBP3.25□□□□□ -1.89
HIF1A-209ENST00000556827 BSXQ3C1V8 233 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 C7orf33Q8WU49 177 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 AP3S1Q92572 193 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 RBPMSQ93062 196 aaKnown RBP3.25□□□□□ -1.89
HIF1A-209ENST00000556827 SLC35E1Q96K37 410 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 SCGB3A2Q96PL1 93 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 SCRT1Q9BWW7 348 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 TMEM222Q9H0R3 208 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 DOK5Q9P104 306 aa3.25□□□□□ -1.89
HIF1A-209ENST00000556827 PAIP2BQ9ULR5 123 aaKnown RBP3.25□□□□□ -1.89
HIF1A-209ENST00000556827 A0A0J9YX75 114 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 DISC1C4P0D8 188 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 CDS2O95674 445 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 CD3DP04234 171 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 OR5AC1P0C628 307 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 HTN1P15515 57 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 AKR1C4P17516 323 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 GPX4P36969 197 aaPredicted RBP3.24□□□□□ -1.89
HIF1A-209ENST00000556827 TAS2R19P59542 299 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 RAB11AP62491 216 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 RHOBP62745 196 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 SURF2Q15527 256 aaPredicted RBP3.24□□□□□ -1.89
HIF1A-209ENST00000556827 GPR107Q5VW38 600 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 LGI3Q8N145 548 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 TMEM256Q8N2U0 113 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 OR13C8Q8NGS7 320 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 OR10J6PQ8NGY7 276 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 LRRC20Q8TCA0 184 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 MARCH1Q8TCQ1 289 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 DTD1Q8TEA8 209 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 IGF2BP2-AS1Q96M15 143 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 GPR82Q96P67 336 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 LINC01587Q99440 93 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 SLC35B3Q9H1N7 401 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 NAA60Q9H7X0 242 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 MRPL36Q9P0J6 103 aaKnown RBP3.24□□□□□ -1.89
HIF1A-209ENST00000556827 TIMM8BQ9Y5J9 83 aaPredicted RBP3.24□□□□□ -1.89
HIF1A-209ENST00000556827 DNAH1Q9P2D7 4330 aa3.24□□□□□ -1.89
HIF1A-209ENST00000556827 A0A087WXM4 84 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 ZNF705GA8MUZ8 300 aaPredicted RBP3.23□□□□□ -1.89
HIF1A-209ENST00000556827 HPGDSO60760 199 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms