RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 IL15RAQ13261 267 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 ZNF493Q6ZR52 646 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 POM121L12Q8N7R1 296 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 C16orf74Q96GX8 76 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 C20orf144Q9BQM9 153 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 MARVELD1Q9BSK0 173 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 TIMM8BQ9Y5J9 83 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-222ENST00000556768 H3BTX0 84 aa5.22□□□□□ -1.57
SCFD1-222ENST00000556768 MRPS12O15235 138 aaKnown RBP5.22□□□□□ -1.57
SCFD1-222ENST00000556768 CRXO43186 299 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-222ENST00000556768 ZNF253O75346 499 aa5.22□□□□□ -1.57
SCFD1-222ENST00000556768 SIX6O95475 246 aa5.22□□□□□ -1.57
SCFD1-222ENST00000556768 IGLC2P0DOY2 106 aa5.22□□□□□ -1.57
SCFD1-222ENST00000556768 HIST1H1EP10412 219 aaKnown RBP5.22□□□□□ -1.57
SCFD1-222ENST00000556768 CAMPP49913 170 aa5.22□□□□□ -1.57
SCFD1-222ENST00000556768 PDE6HQ13956 83 aa5.22□□□□□ -1.57
SCFD1-222ENST00000556768 CLINT1Q14677 625 aa5.22□□□□□ -1.57
SCFD1-222ENST00000556768 THAP6Q8TBB0 222 aa5.22□□□□□ -1.57
SCFD1-222ENST00000556768 PPP1R1CQ8WVI7 109 aa5.22□□□□□ -1.57
SCFD1-222ENST00000556768 NPCDR1Q9BY65 106 aa5.22□□□□□ -1.57
SCFD1-222ENST00000556768 C11orf1Q9H5F2 150 aa5.22□□□□□ -1.57
SCFD1-222ENST00000556768 PRELID1Q9Y255 219 aa5.22□□□□□ -1.57
SCFD1-222ENST00000556768 FRAS1Q86XX4 4008 aa5.22□□□□□ -1.57
SCFD1-222ENST00000556768 TRAV5A0A0B4J249 113 aa5.21□□□□□ -1.58
SCFD1-222ENST00000556768 USP17L23D6RBM5 183 aa5.21□□□□□ -1.58
SCFD1-222ENST00000556768 H3BQ15 152 aa5.21□□□□□ -1.58
SCFD1-222ENST00000556768 IFNA5P01569 189 aa5.21□□□□□ -1.58
SCFD1-222ENST00000556768 LEPP41159 167 aa5.21□□□□□ -1.58
SCFD1-222ENST00000556768 C15orf53Q8NAA6 179 aa5.21□□□□□ -1.58
SCFD1-222ENST00000556768 SCGB1C1Q8TD33 95 aa5.21□□□□□ -1.58
SCFD1-222ENST00000556768 BLNKQ8WV28 456 aa5.21□□□□□ -1.58
SCFD1-222ENST00000556768 MRPL53Q96EL3 112 aaKnown RBP5.21□□□□□ -1.58
SCFD1-222ENST00000556768 ATG101Q9BSB4 218 aa5.21□□□□□ -1.58
SCFD1-222ENST00000556768 TMEM14CQ9P0S9 112 aa5.21□□□□□ -1.58
SCFD1-222ENST00000556768 TRBV19A0A075B6N1 114 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 CBY3A6NI87 242 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 SNURFLB1AK76 121 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 F5H768 121 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 SLC17A3O00476 420 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 ATP5G1P05496 136 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 ATP5G3P48201 142 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 MORN5Q5VZ52 161 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 PET117Q6UWS5 81 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 TMEM263Q8WUH6 116 aaKnown RBP5.2□□□□□ -1.58
SCFD1-222ENST00000556768 LINC00477Q96M19 166 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 ZNF586Q9NXT0 402 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 OR5AC2Q9NZP5 309 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 NBEAP1P0C6P0 100 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 AZU1P20160 251 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 CSN1S1P47710 185 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 IFITM3Q01628 133 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 RNF212Q495C1 297 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 SOHLH1Q5JUK2 328 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 TMEM78Q5T7P6 136 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 ODF3Q96PU9 254 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 MRPL32Q9BYC8 188 aaKnown RBP5.2□□□□□ -1.58
SCFD1-222ENST00000556768 WDR61Q9GZS3 305 aaKnown RBP5.2□□□□□ -1.58
SCFD1-222ENST00000556768 OR51M1Q9H341 326 aa5.2□□□□□ -1.58
SCFD1-222ENST00000556768 NOP10Q9NPE3 64 aaKnown RBP5.2□□□□□ -1.58
SCFD1-222ENST00000556768 BIRC6Q9NR09 4857 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 VPS13DQ5THJ4 4388 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 TRAV12-3A0A0B4J271 114 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 PRAC2D3DTV9 90 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 OR7C2O60412 319 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 MPC2O95563 127 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 PRM2P04554 102 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 SLC25A5P05141 298 aaKnown RBP5.19□□□□□ -1.58
SCFD1-222ENST00000556768 GPX1P07203 203 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 RPL12P30050 165 aaKnown RBP5.19□□□□□ -1.58
SCFD1-222ENST00000556768 H2BFSP57053 126 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 TAS2R45P59539 299 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 ZNF674Q2M3X9 581 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 LINC00336Q6ZUF6 198 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 ATP5SQ99766 215 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 PYGO2Q9BRQ0 406 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 PAXXQ9BUH6 204 aa5.19□□□□□ -1.58
SCFD1-222ENST00000556768 NPIPB6E9PJ23 425 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 NUDT3O95989 172 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 CT45A10P0DMU9 189 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 PYYP10082 97 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 PRB4P10163 310 aaPredicted RBP5.18□□□□□ -1.58
SCFD1-222ENST00000556768 CCL18P55774 89 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 ICAM4Q14773 271 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 FCN2Q15485 313 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 GCSAMLQ5JQS6 135 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 GFI1BQ5VTD9 330 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 CST9LP1Q5W188 147 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 FUT9Q9Y231 359 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 A0A1W2PPV4 95 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 H0YIZ8 118 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 M0R2N4 97 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 M0R3E3 92 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 NMBP08949 121 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 RANP62826 216 aaKnown RBP5.18□□□□□ -1.58
SCFD1-222ENST00000556768 OR5I1Q13606 314 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 KHDC3LQ587J8 217 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 FFAR4Q5NUL3 377 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 FAM74A1Q5RGS3 127 aa5.18□□□□□ -1.58
SCFD1-222ENST00000556768 FAM122CQ6P4D5 195 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms