RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 OR5C1Q8NGR4 320 aa8.18□□□□□ -1.1
ACTN1-221ENST00000556571 OR1L4Q8NGR5 311 aa8.18□□□□□ -1.1
ACTN1-221ENST00000556571 RPUSD4Q96CM3 377 aaKnown RBP8.18□□□□□ -1.1
ACTN1-221ENST00000556571 ARV1Q9H2C2 271 aa8.18□□□□□ -1.1
ACTN1-221ENST00000556571 A0A087X0K7 114 aa8.17□□□□□ -1.1
ACTN1-221ENST00000556571 GAGE12BA1L429 117 aa8.17□□□□□ -1.1
ACTN1-221ENST00000556571 GAGE7O76087 117 aa8.17□□□□□ -1.1
ACTN1-221ENST00000556571 MPC2O95563 127 aa8.17□□□□□ -1.1
ACTN1-221ENST00000556571 GAGE12FP0CL80 117 aa8.17□□□□□ -1.1
ACTN1-221ENST00000556571 GAGE12GP0CL81 117 aa8.17□□□□□ -1.1
ACTN1-221ENST00000556571 GAGE12IP0CL82 117 aa8.17□□□□□ -1.1
ACTN1-221ENST00000556571 ERVFC1-1P60608 527 aa8.17□□□□□ -1.1
ACTN1-221ENST00000556571 NHLH2Q02577 135 aa8.17□□□□□ -1.1
ACTN1-221ENST00000556571 LINC00305Q7Z4B0 112 aa8.17□□□□□ -1.1
ACTN1-221ENST00000556571 THAP6Q8TBB0 222 aa8.17□□□□□ -1.1
ACTN1-221ENST00000556571 PFDN5Q99471 154 aa8.17□□□□□ -1.1
ACTN1-221ENST00000556571 KCNIP2Q9NS61 270 aa8.17□□□□□ -1.1
ACTN1-221ENST00000556571 SNURFLB1AK76 121 aa8.16□□□□□ -1.1
ACTN1-221ENST00000556571 H0YIZ8 118 aa8.16□□□□□ -1.1
ACTN1-221ENST00000556571 RPL29P47914 159 aaKnown RBP8.16□□□□□ -1.1
ACTN1-221ENST00000556571 MIC13Q5XKP0 118 aa8.16□□□□□ -1.1
ACTN1-221ENST00000556571 DNAJC4Q9NNZ3 241 aa8.16□□□□□ -1.1
ACTN1-221ENST00000556571 SLC39A9Q9NUM3 307 aa8.16□□□□□ -1.1
ACTN1-221ENST00000556571 MBD2Q9UBB5 411 aa8.16□□□□□ -1.1
ACTN1-221ENST00000556571 A0A096LPF7 62 aa8.15□□□□□ -1.1
ACTN1-221ENST00000556571 C17orf112F2Z3M2 114 aa8.15□□□□□ -1.1
ACTN1-221ENST00000556571 SIVA1O15304 175 aa8.15□□□□□ -1.1
ACTN1-221ENST00000556571 IFNA5P01569 189 aa8.15□□□□□ -1.1
ACTN1-221ENST00000556571 CXCL2P19875 107 aa8.15□□□□□ -1.1
ACTN1-221ENST00000556571 RPL12P30050 165 aaKnown RBP8.15□□□□□ -1.1
ACTN1-221ENST00000556571 PATE2Q6UY27 113 aa8.15□□□□□ -1.1
ACTN1-221ENST00000556571 BPIFA4PQ86YQ2 179 aa8.15□□□□□ -1.1
ACTN1-221ENST00000556571 SCGB1C1Q8TD33 95 aa8.15□□□□□ -1.1
ACTN1-221ENST00000556571 CHAC2Q8WUX2 184 aa8.15□□□□□ -1.1
ACTN1-221ENST00000556571 NPCDR1Q9BY65 106 aa8.15□□□□□ -1.1
ACTN1-221ENST00000556571 PXMP4Q9Y6I8 212 aa8.15□□□□□ -1.1
ACTN1-221ENST00000556571 VPS13BQ7Z7G8 4022 aa8.15□□□□□ -1.11
ACTN1-221ENST00000556571 PRB4P10163 310 aaPredicted RBP8.14□□□□□ -1.11
ACTN1-221ENST00000556571 FUSP35637 526 aaKnown RBP eCLIP8.14□□□□□ -1.11
ACTN1-221ENST00000556571 DAZ2Q13117 558 aaKnown RBP8.14□□□□□ -1.11
ACTN1-221ENST00000556571 KIR3DS1Q14943 382 aa8.14□□□□□ -1.11
ACTN1-221ENST00000556571 OPCMLQ14982 345 aa8.14□□□□□ -1.11
ACTN1-221ENST00000556571 GFI1BQ5VTD9 330 aa8.14□□□□□ -1.11
ACTN1-221ENST00000556571 NFE4Q86UQ8 179 aa8.14□□□□□ -1.11
ACTN1-221ENST00000556571 ASB13Q8WXK3 278 aa8.14□□□□□ -1.11
ACTN1-221ENST00000556571 TMEM37Q8WXS4 190 aa8.14□□□□□ -1.11
ACTN1-221ENST00000556571 VSIG2Q96IQ7 327 aa8.14□□□□□ -1.11
ACTN1-221ENST00000556571 ATP5SQ99766 215 aa8.14□□□□□ -1.11
ACTN1-221ENST00000556571 TMPRSS5Q9H3S3 457 aa8.14□□□□□ -1.11
ACTN1-221ENST00000556571 HSPB11Q9Y547 144 aa8.14□□□□□ -1.11
ACTN1-221ENST00000556571 MRPS12O15235 138 aaKnown RBP8.13□□□□□ -1.11
ACTN1-221ENST00000556571 KRTAP10-1P60331 282 aa8.13□□□□□ -1.11
ACTN1-221ENST00000556571 LCN15Q6UWW0 184 aa8.13□□□□□ -1.11
ACTN1-221ENST00000556571 Q6ZTI0 123 aa8.13□□□□□ -1.11
ACTN1-221ENST00000556571 C18orf15Q96N68 181 aa8.13□□□□□ -1.11
ACTN1-221ENST00000556571 SLC50A1Q9BRV3 221 aa8.13□□□□□ -1.11
ACTN1-221ENST00000556571 SMIM3Q9BZL3 60 aa8.13□□□□□ -1.11
ACTN1-221ENST00000556571 ZNF331Q9NQX6 463 aaPredicted RBP8.13□□□□□ -1.11
ACTN1-221ENST00000556571 TRGV2A0A075B6R0 118 aa8.12□□□□□ -1.11
ACTN1-221ENST00000556571 GIPP09681 153 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-221ENST00000556571 ICAM4Q14773 271 aa8.12□□□□□ -1.11
ACTN1-221ENST00000556571 GUK1Q16774 197 aa8.12□□□□□ -1.11
ACTN1-221ENST00000556571 PYGO2Q9BRQ0 406 aa8.12□□□□□ -1.11
ACTN1-221ENST00000556571 PARD6GQ9BYG4 376 aaPredicted RBP8.12□□□□□ -1.11
ACTN1-221ENST00000556571 WDR61Q9GZS3 305 aaKnown RBP8.12□□□□□ -1.11
ACTN1-221ENST00000556571 A0A087WTM6 91 aa8.11□□□□□ -1.11
ACTN1-221ENST00000556571 FAM229AH3BQW9 127 aa8.11□□□□□ -1.11
ACTN1-221ENST00000556571 NXPH4O95158 308 aa8.11□□□□□ -1.11
ACTN1-221ENST00000556571 SMR3BP02814 79 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-221ENST00000556571 LEPP41159 167 aa8.11□□□□□ -1.11
ACTN1-221ENST00000556571 INO80EQ8NBZ0 244 aaPredicted RBP8.11□□□□□ -1.11
ACTN1-221ENST00000556571 MDFICQ9P1T7 246 aa8.11□□□□□ -1.11
ACTN1-221ENST00000556571 TNFRSF18Q9Y5U5 241 aa8.11□□□□□ -1.11
ACTN1-221ENST00000556571 TRAV9-2A0A087WT02 112 aa8.1□□□□□ -1.11
ACTN1-221ENST00000556571 TRAV5A0A0B4J249 113 aa8.1□□□□□ -1.11
ACTN1-221ENST00000556571 TRAV12-3A0A0B4J271 114 aa8.1□□□□□ -1.11
ACTN1-221ENST00000556571 PRAC2D3DTV9 90 aa8.1□□□□□ -1.11
ACTN1-221ENST00000556571 J3KRW8 73 aa8.1□□□□□ -1.11
ACTN1-221ENST00000556571 SNRPCP09234 159 aaKnown RBP8.1□□□□□ -1.11
ACTN1-221ENST00000556571 ZNF266Q14584 549 aa8.1□□□□□ -1.11
ACTN1-221ENST00000556571 MORN5Q5VZ52 161 aa8.1□□□□□ -1.11
ACTN1-221ENST00000556571 ODF3Q96PU9 254 aa8.1□□□□□ -1.11
ACTN1-221ENST00000556571 TIMM9Q9Y5J7 89 aa8.1□□□□□ -1.11
ACTN1-221ENST00000556571 ICOSQ9Y6W8 199 aa8.1□□□□□ -1.11
ACTN1-221ENST00000556571 FXYD6-FXYD2A0A087WZ82 144 aa8.09□□□□□ -1.11
ACTN1-221ENST00000556571 H3BTX0 84 aa8.09□□□□□ -1.11
ACTN1-221ENST00000556571 PAX4O43316 350 aa8.09□□□□□ -1.11
ACTN1-221ENST00000556571 ZNF324O75467 553 aaPredicted RBP8.09□□□□□ -1.11
ACTN1-221ENST00000556571 DNAH10OSP0CZ25 163 aa8.09□□□□□ -1.11
ACTN1-221ENST00000556571 CT45A10P0DMU9 189 aa8.09□□□□□ -1.11
ACTN1-221ENST00000556571 IGLC2P0DOY2 106 aa8.09□□□□□ -1.11
ACTN1-221ENST00000556571 GCSHP23434 173 aa8.09□□□□□ -1.11
ACTN1-221ENST00000556571 GCSAMLQ5JQS6 135 aa8.09□□□□□ -1.11
ACTN1-221ENST00000556571 FFAR4Q5NUL3 377 aa8.09□□□□□ -1.11
ACTN1-221ENST00000556571 ZNF680Q8NEM1 530 aa8.09□□□□□ -1.11
ACTN1-221ENST00000556571 OR2T35Q8NGX2 323 aa8.09□□□□□ -1.11
ACTN1-221ENST00000556571 MRPL32Q9BYC8 188 aaKnown RBP8.09□□□□□ -1.11
ACTN1-221ENST00000556571 GSN-AS1Q9NRJ2 163 aa8.09□□□□□ -1.11
ACTN1-221ENST00000556571 TMEM14CQ9P0S9 112 aa8.09□□□□□ -1.11
ACTN1-221ENST00000556571 FUT9Q9Y231 359 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms