RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 LCNL1Q6ZST4 164 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 RITA1Q96K30 269 aa11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 CENPFP49454 3210 aa11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 NPFFO15130 113 aa11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 SRD5A1P18405 259 aa11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 TMEM219Q86XT9 240 aa11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 C8orf31Q8N9H6 132 aa11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 DLX4Q92988 240 aaPredicted RBP11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 MRPL36Q9P0J6 103 aaKnown RBP11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 SPRY4Q9C004 299 aa11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 DKK4Q9UBT3 224 aa11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 PRR14LQ5THK1 2151 aa11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 PTPRSQ13332 1948 aa11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 VGLL1Q99990 258 aa11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 KLF12Q9Y4X4 402 aa11.91□□□□□ -0.5
ARHGEF40-207ENST00000556399 SIVA1O15304 175 aa11.9□□□□□ -0.5
ARHGEF40-207ENST00000556399 DUX5Q96PT3 197 aa11.9□□□□□ -0.5
ARHGEF40-207ENST00000556399 NPFFR1Q9GZQ6 430 aa11.9□□□□□ -0.5
ARHGEF40-207ENST00000556399 EMP1P54849 157 aa11.9□□□□□ -0.5
ARHGEF40-207ENST00000556399 MSMPQ1L6U9 139 aa11.9□□□□□ -0.5
ARHGEF40-207ENST00000556399 UTF1Q5T230 341 aa11.9□□□□□ -0.5
ARHGEF40-207ENST00000556399 CSTL1Q9H114 145 aa11.9□□□□□ -0.5
ARHGEF40-207ENST00000556399 MED13LQ71F56 2210 aa11.9□□□□□ -0.5
ARHGEF40-207ENST00000556399 TNCP24821 2201 aa11.9□□□□□ -0.5
ARHGEF40-207ENST00000556399 PCNX2A6NKB5 2137 aa11.9□□□□□ -0.5
ARHGEF40-207ENST00000556399 TAX1BP3O14907 124 aa11.9□□□□□ -0.5
ARHGEF40-207ENST00000556399 MEIG1Q5JSS6 88 aa11.9□□□□□ -0.5
ARHGEF40-207ENST00000556399 PCP2Q8IVA1 136 aa11.9□□□□□ -0.5
ARHGEF40-207ENST00000556399 MRAP2Q96G30 205 aa11.9□□□□□ -0.5
ARHGEF40-207ENST00000556399 IGHV3-64A0A075B6Q5 118 aa11.9□□□□□ -0.51
ARHGEF40-207ENST00000556399 TRBV7-1A0A0A6YYK4 115 aa11.9□□□□□ -0.51
ARHGEF40-207ENST00000556399 C2orf70A6NJV1 201 aa11.9□□□□□ -0.51
ARHGEF40-207ENST00000556399 IGHV4-39P01824 125 aa11.9□□□□□ -0.51
ARHGEF40-207ENST00000556399 ANKRD39Q53RE8 183 aa11.9□□□□□ -0.51
ARHGEF40-207ENST00000556399 PLA2G2CQ5R387 149 aa11.9□□□□□ -0.51
ARHGEF40-207ENST00000556399 LINC00477Q96M19 166 aa11.9□□□□□ -0.51
ARHGEF40-207ENST00000556399 KAAG1Q9UBP8 84 aa11.9□□□□□ -0.51
ARHGEF40-207ENST00000556399 A0A1W2PNU3 283 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF40-207ENST00000556399 K7ERJ3 54 aa11.89□□□□□ -0.51
ARHGEF40-207ENST00000556399 C19orf54Q5BKX5 351 aa11.89□□□□□ -0.51
ARHGEF40-207ENST00000556399 IGFL3Q6UXB1 125 aa11.89□□□□□ -0.51
ARHGEF40-207ENST00000556399 TRAV26-2A0A0B4J265 109 aa11.89□□□□□ -0.51
ARHGEF40-207ENST00000556399 MRPL35Q9NZE8 188 aaKnown RBP11.89□□□□□ -0.51
ARHGEF40-207ENST00000556399 LINC01549A6NIU2 74 aa11.89□□□□□ -0.51
ARHGEF40-207ENST00000556399 CRXO43186 299 aaPredicted RBP11.89□□□□□ -0.51
ARHGEF40-207ENST00000556399 LRP4O75096 1905 aa11.89□□□□□ -0.51
ARHGEF40-207ENST00000556399 DTX2Q86UW9 622 aa11.89□□□□□ -0.51
ARHGEF40-207ENST00000556399 RAX2Q96IS3 184 aa11.89□□□□□ -0.51
ARHGEF40-207ENST00000556399 PSMB11A5LHX3 300 aa11.88□□□□□ -0.51
ARHGEF40-207ENST00000556399 EGR2P11161 476 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF40-207ENST00000556399 COL6A6A6NMZ7 2263 aa11.88□□□□□ -0.51
ARHGEF40-207ENST00000556399 ETDBQ3ZM63 59 aa11.88□□□□□ -0.51
ARHGEF40-207ENST00000556399 GDF5OSQ5U4N7 250 aa11.88□□□□□ -0.51
ARHGEF40-207ENST00000556399 C1orf229Q6ZS94 237 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF40-207ENST00000556399 TMEM262E9PQX1 116 aa11.88□□□□□ -0.51
ARHGEF40-207ENST00000556399 WISP2O76076 250 aa11.88□□□□□ -0.51
ARHGEF40-207ENST00000556399 SUMO2P61956 95 aaKnown RBP11.88□□□□□ -0.51
ARHGEF40-207ENST00000556399 MOB4Q9Y3A3 225 aa11.88□□□□□ -0.51
ARHGEF40-207ENST00000556399 BPTFQ12830 3046 aa11.87□□□□□ -0.51
ARHGEF40-207ENST00000556399 ATG2AQ2TAZ0 1938 aa11.87□□□□□ -0.51
ARHGEF40-207ENST00000556399 SCGB1A1P11684 91 aa11.87□□□□□ -0.51
ARHGEF40-207ENST00000556399 TSSC4Q9Y5U2 329 aaPredicted RBP11.87□□□□□ -0.51
ARHGEF40-207ENST00000556399 IGKV1-17P01599 117 aa11.87□□□□□ -0.51
ARHGEF40-207ENST00000556399 CKS1BP61024 79 aa11.87□□□□□ -0.51
ARHGEF40-207ENST00000556399 CCL19Q99731 98 aa11.87□□□□□ -0.51
ARHGEF40-207ENST00000556399 WT1P19544 449 aaPredicted RBP11.87□□□□□ -0.51
ARHGEF40-207ENST00000556399 ANAPC13Q9BS18 74 aa11.87□□□□□ -0.51
ARHGEF40-207ENST00000556399 C7orf69Q9H7B7 122 aa11.87□□□□□ -0.51
ARHGEF40-207ENST00000556399 ERG28Q9UKR5 140 aa11.87□□□□□ -0.51
ARHGEF40-207ENST00000556399 INS-IGF2F8WCM5 200 aa11.86□□□□□ -0.51
ARHGEF40-207ENST00000556399 HLA-DMBP28068 263 aa11.86□□□□□ -0.51
ARHGEF40-207ENST00000556399 COPS9Q8WXC6 57 aa11.86□□□□□ -0.51
ARHGEF40-207ENST00000556399 UBE2L6O14933 153 aa11.86□□□□□ -0.51
ARHGEF40-207ENST00000556399 IGLV2-23P01705 113 aa11.86□□□□□ -0.51
ARHGEF40-207ENST00000556399 CEND1Q8N111 149 aa11.86□□□□□ -0.51
ARHGEF40-207ENST00000556399 SPTAN1Q13813 2472 aaKnown RBP11.86□□□□□ -0.51
ARHGEF40-207ENST00000556399 NCKAP5O14513 1909 aa11.86□□□□□ -0.51
ARHGEF40-207ENST00000556399 I3L2K1 104 aa11.86□□□□□ -0.51
ARHGEF40-207ENST00000556399 ATP6V0E1O15342 81 aa11.86□□□□□ -0.51
ARHGEF40-207ENST00000556399 CTRLP40313 264 aa11.86□□□□□ -0.51
ARHGEF40-207ENST00000556399 PRSS33Q8NF86 280 aa11.86□□□□□ -0.51
ARHGEF40-207ENST00000556399 FAM110DQ8TAY7 271 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF40-207ENST00000556399 A0A1B0GXF2 115 aa11.85□□□□□ -0.51
ARHGEF40-207ENST00000556399 CACNA1BQ00975 2339 aa11.85□□□□□ -0.51
ARHGEF40-207ENST00000556399 CPAMD8Q8IZJ3 1885 aa11.85□□□□□ -0.51
ARHGEF40-207ENST00000556399 VCYO14598 125 aa11.85□□□□□ -0.51
ARHGEF40-207ENST00000556399 CGB3P0DN86 165 aa11.85□□□□□ -0.51
ARHGEF40-207ENST00000556399 CGB7P0DN87 165 aa11.85□□□□□ -0.51
ARHGEF40-207ENST00000556399 C2orf66Q6UXQ4 117 aa11.85□□□□□ -0.51
ARHGEF40-207ENST00000556399 DUX3Q96PT4 197 aa11.85□□□□□ -0.51
ARHGEF40-207ENST00000556399 F8W1H4 67 aa11.85□□□□□ -0.51
ARHGEF40-207ENST00000556399 EFNA4P52798 201 aa11.85□□□□□ -0.51
ARHGEF40-207ENST00000556399 IGKV1D-37A0A075B6S9 117 aa11.84□□□□□ -0.51
ARHGEF40-207ENST00000556399 C19orf71A6NCJ1 209 aa11.84□□□□□ -0.51
ARHGEF40-207ENST00000556399 SAP30O75446 220 aa11.84□□□□□ -0.51
ARHGEF40-207ENST00000556399 PRR30Q53SZ7 412 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF40-207ENST00000556399 IGFL2Q6UWQ7 119 aa11.84□□□□□ -0.51
ARHGEF40-207ENST00000556399 CD28P10747 220 aa11.84□□□□□ -0.51
ARHGEF40-207ENST00000556399 RNF114Q9Y508 228 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms