RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 PSMB3P49720 205 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 YPEL3P61236 119 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-236ENST00000556220 BSXQ3C1V8 233 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 FAM74A1Q5RGS3 127 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 RPL7L1Q6DKI1 246 aaKnown RBP4.63□□□□□ -1.67
ATXN3-236ENST00000556220 LPCAT3Q6P1A2 487 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 AMTNQ6UX39 209 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 H2BFWTQ7Z2G1 175 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 CCDC71LQ8N9Z2 235 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 OR1S2Q8NGQ3 325 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 COQ8AQ8NI60 647 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 RNF125Q96EQ8 232 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 GSKIPQ9P0R6 139 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 HSPB7Q9UBY9 170 aa4.63□□□□□ -1.67
ATXN3-236ENST00000556220 LSM5Q9Y4Y9 91 aaKnown RBP4.63□□□□□ -1.67
ATXN3-236ENST00000556220 TIMM8BQ9Y5J9 83 aaPredicted RBP4.63□□□□□ -1.67
ATXN3-236ENST00000556220 IGLV5-52A0A0A0MRZ9 124 aa4.62□□□□□ -1.67
ATXN3-236ENST00000556220 IL4P05112 153 aa4.62□□□□□ -1.67
ATXN3-236ENST00000556220 SLC25A6P12236 298 aa4.62□□□□□ -1.67
ATXN3-236ENST00000556220 OR10J1P30954 320 aa4.62□□□□□ -1.67
ATXN3-236ENST00000556220 TMEM14EPQ6UXP3 125 aa4.62□□□□□ -1.67
ATXN3-236ENST00000556220 TMEM182Q6ZP80 229 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-236ENST00000556220 CMTM1Q8IZ96 169 aa4.62□□□□□ -1.67
ATXN3-236ENST00000556220 TMEM252Q8N6L7 170 aa4.62□□□□□ -1.67
ATXN3-236ENST00000556220 OR10J6PQ8NGY7 276 aa4.62□□□□□ -1.67
ATXN3-236ENST00000556220 HYLS1Q96M11 299 aa4.62□□□□□ -1.67
ATXN3-236ENST00000556220 SCGB3A2Q96PL1 93 aa4.62□□□□□ -1.67
ATXN3-236ENST00000556220 SMIM3Q9BZL3 60 aa4.62□□□□□ -1.67
ATXN3-236ENST00000556220 SH3BGRL3Q9H299 93 aa4.62□□□□□ -1.67
ATXN3-236ENST00000556220 NOP10Q9NPE3 64 aaKnown RBP4.62□□□□□ -1.67
ATXN3-236ENST00000556220 FAM212BQ9NTI7 297 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-236ENST00000556220 DOK5Q9P104 306 aa4.62□□□□□ -1.67
ATXN3-236ENST00000556220 IGKV1OR2-108A0A075B7D4 117 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 DUXBA0A1W2PPF3 345 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 TEX46H3BTG2 121 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 ISLRO14498 428 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 BCL2L11O43521 198 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 SSSCA1O60232 199 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 INSP01308 110 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 NMBP08949 121 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 RD3LP0DJH9 198 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 TAS2R60P59551 318 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 S100A10P60903 97 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 ZNF345Q14585 488 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 SMCO1Q147U7 214 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 ZNF546Q86UE3 836 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 SLC7A5P1Q8MH63 180 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 ZNF680Q8NEM1 530 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 DAZAP1Q96EP5 407 aaKnown RBP4.61□□□□□ -1.67
ATXN3-236ENST00000556220 LINC01587Q99440 93 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 RPRMQ9NS64 109 aa4.61□□□□□ -1.67
ATXN3-236ENST00000556220 TRAV9-2A0A087WT02 112 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 A0A096LPF7 62 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 M0R2Z0 102 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 WRBO00258 174 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 TSC22D2O75157 780 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 B3GALNT1O75752 331 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 CST7O76096 145 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 NXPH4O95158 308 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 TOMM40O96008 361 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 METTL15P1P0C7V9 234 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 S100A11P31949 105 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 NUP62P37198 522 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-236ENST00000556220 ZNF726P1Q15940 193 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 SPINK13Q1W4C9 94 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 SAMD13Q5VXD3 122 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 TEX261Q6UWH6 196 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 ALKAL2Q6UX46 152 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 ACOT7LQ6ZUV0 252 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 TMEM144Q7Z5S9 345 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 LINC00612Q8N6U2 182 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 OR51G1Q8NGK1 321 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 PRSS3P2Q8NHM4 247 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 C16orf74Q96GX8 76 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 SMIM8Q96KF7 97 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 LYRM2Q9NU23 88 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-236ENST00000556220 KCNIP3Q9Y2W7 256 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 U3KQ87 197 aa4.6□□□□□ -1.67
ATXN3-236ENST00000556220 IGKV1D-37A0A075B6S9 117 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 TRAV12-2A0A075B6T6 113 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 LRCOL1A6NCL2 159 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 PGPEP1LA6NFU8 196 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 C9JQL5 133 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 L7N2F9 121 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 SYNGR2O43760 224 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 DUSP14O95147 198 aaKnown RBP4.59□□□□□ -1.67
ATXN3-236ENST00000556220 PSG1P11464 419 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 HTN1P15515 57 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 RPL12P30050 165 aaKnown RBP4.59□□□□□ -1.67
ATXN3-236ENST00000556220 FHITP49789 147 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 CNN1P51911 297 aaKnown RBP4.59□□□□□ -1.67
ATXN3-236ENST00000556220 RND2P52198 227 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 KRTAP10-4P60372 401 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-236ENST00000556220 TWIST1Q15672 202 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 VWC2Q2TAL6 325 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 C1orf194Q5T5A4 169 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 ZNF493Q6ZR52 646 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 Q6ZSA8 131 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 BAP18Q8IXM2 172 aa4.59□□□□□ -1.67
ATXN3-236ENST00000556220 TMEM256Q8N2U0 113 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms