RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CRISP2P16562 243 aa9.74□□□□□ -0.85
CHMP4BP1-201ENST00000556017 IL15RAQ13261 267 aa9.74□□□□□ -0.85
CHMP4BP1-201ENST00000556017 FHL2Q14192 279 aa9.74□□□□□ -0.85
CHMP4BP1-201ENST00000556017 EIF4E3Q8N5X7 224 aaKnown RBP9.74□□□□□ -0.85
CHMP4BP1-201ENST00000556017 ZNF680Q8NEM1 530 aa9.74□□□□□ -0.85
CHMP4BP1-201ENST00000556017 CHAC2Q8WUX2 184 aa9.74□□□□□ -0.85
CHMP4BP1-201ENST00000556017 ST6GAL2Q96JF0 529 aa9.74□□□□□ -0.85
CHMP4BP1-201ENST00000556017 A0A087WTM6 91 aa9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 PLA2G10O15496 165 aa9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 INAFM2P0DMQ5 153 aa9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 PYYP10082 97 aa9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 RPL29P47914 159 aaKnown RBP9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 CRYBA4P53673 196 aa9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 GCSAMLQ5JQS6 135 aa9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 IBA57Q5T440 356 aaKnown RBP9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 LYPD5Q6UWN5 251 aa9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 C9orf47Q6ZRZ4 202 aa9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 EXOC3-AS1Q8N2X6 119 aa9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 FAM167A-AS1Q96KT0 104 aa9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 VGLL1Q99990 258 aa9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 SLC39A9Q9NUM3 307 aa9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 TMEM14CQ9P0S9 112 aa9.73□□□□□ -0.85
CHMP4BP1-201ENST00000556017 IGKV2-40A0A087WW87 121 aaPredicted RBP9.72□□□□□ -0.85
CHMP4BP1-201ENST00000556017 IGSF23A1L1A6 192 aa9.72□□□□□ -0.85
CHMP4BP1-201ENST00000556017 PAX4O43316 350 aa9.72□□□□□ -0.85
CHMP4BP1-201ENST00000556017 IGKV2D-40P01614 121 aaPredicted RBP9.72□□□□□ -0.85
CHMP4BP1-201ENST00000556017 IGHV3-53P01767 116 aa9.72□□□□□ -0.85
CHMP4BP1-201ENST00000556017 RNASE4P34096 147 aaKnown RBP9.72□□□□□ -0.85
CHMP4BP1-201ENST00000556017 SPANXN2Q5MJ10 180 aa9.72□□□□□ -0.85
CHMP4BP1-201ENST00000556017 Q5VSD8 79 aa9.72□□□□□ -0.85
CHMP4BP1-201ENST00000556017 CDPF1Q6NVV7 123 aa9.72□□□□□ -0.85
CHMP4BP1-201ENST00000556017 Q6ZRG5 221 aa9.72□□□□□ -0.85
CHMP4BP1-201ENST00000556017 LINC00477Q96M19 166 aa9.72□□□□□ -0.85
CHMP4BP1-201ENST00000556017 UQCC1Q9NVA1 299 aa9.72□□□□□ -0.85
CHMP4BP1-201ENST00000556017 MRPL16Q9NX20 251 aaKnown RBP9.72□□□□□ -0.85
CHMP4BP1-201ENST00000556017 ICOSQ9Y6W8 199 aa9.72□□□□□ -0.85
CHMP4BP1-201ENST00000556017 MPDU1O75352 247 aa9.71□□□□□ -0.86
CHMP4BP1-201ENST00000556017 HIST1H1EP10412 219 aaKnown RBP9.71□□□□□ -0.86
CHMP4BP1-201ENST00000556017 IL7P13232 177 aa9.71□□□□□ -0.86
CHMP4BP1-201ENST00000556017 PDE6HQ13956 83 aa9.71□□□□□ -0.86
CHMP4BP1-201ENST00000556017 TRIQKQ629K1 86 aa9.71□□□□□ -0.86
CHMP4BP1-201ENST00000556017 OR1L4Q8NGR5 311 aa9.71□□□□□ -0.86
CHMP4BP1-201ENST00000556017 PRO0255Q9UI72 69 aa9.71□□□□□ -0.86
CHMP4BP1-201ENST00000556017 LSM5Q9Y4Y9 91 aaKnown RBP9.71□□□□□ -0.86
CHMP4BP1-201ENST00000556017 PRAF2O60831 178 aa9.7□□□□□ -0.86
CHMP4BP1-201ENST00000556017 NMBP08949 121 aa9.7□□□□□ -0.86
CHMP4BP1-201ENST00000556017 ERVFC1-1P60608 527 aa9.7□□□□□ -0.86
CHMP4BP1-201ENST00000556017 WFDC10BQ8IUB3 73 aa9.7□□□□□ -0.86
CHMP4BP1-201ENST00000556017 C8orf49Q96NF6 230 aa9.7□□□□□ -0.86
CHMP4BP1-201ENST00000556017 PFDN5Q99471 154 aa9.7□□□□□ -0.86
CHMP4BP1-201ENST00000556017 SLC25A2Q9BXI2 301 aa9.7□□□□□ -0.86
CHMP4BP1-201ENST00000556017 C20orf85Q9H1P6 137 aa9.7□□□□□ -0.86
CHMP4BP1-201ENST00000556017 PRELID1Q9Y255 219 aa9.7□□□□□ -0.86
CHMP4BP1-201ENST00000556017 UBE2L5PA0A1B0GUS4 154 aa9.69□□□□□ -0.86
CHMP4BP1-201ENST00000556017 L7N2F9 121 aa9.69□□□□□ -0.86
CHMP4BP1-201ENST00000556017 CAV2P51636 162 aa9.69□□□□□ -0.86
CHMP4BP1-201ENST00000556017 VAMP2P63027 116 aa9.69□□□□□ -0.86
CHMP4BP1-201ENST00000556017 RAB31Q13636 194 aa9.69□□□□□ -0.86
CHMP4BP1-201ENST00000556017 TMEM252Q8N6L7 170 aa9.69□□□□□ -0.86
CHMP4BP1-201ENST00000556017 SEC22CQ9BRL7 303 aa9.69□□□□□ -0.86
CHMP4BP1-201ENST00000556017 LYRM2Q9NU23 88 aaPredicted RBP9.69□□□□□ -0.86
CHMP4BP1-201ENST00000556017 ZNF492Q9P255 531 aa9.69□□□□□ -0.86
CHMP4BP1-201ENST00000556017 HHLA3Q9XRX5 114 aa9.69□□□□□ -0.86
CHMP4BP1-201ENST00000556017 IGHV1OR15-1A0A075B7D0 117 aa9.68□□□□□ -0.86
CHMP4BP1-201ENST00000556017 SMR3BP02814 79 aaPredicted RBP9.68□□□□□ -0.86
CHMP4BP1-201ENST00000556017 GPX1P07203 203 aa9.68□□□□□ -0.86
CHMP4BP1-201ENST00000556017 SULT1A1P50225 295 aa9.68□□□□□ -0.86
CHMP4BP1-201ENST00000556017 ICAM4Q14773 271 aa9.68□□□□□ -0.86
CHMP4BP1-201ENST00000556017 BLNKQ8WV28 456 aa9.68□□□□□ -0.86
CHMP4BP1-201ENST00000556017 ZNF479Q96JC4 524 aa9.68□□□□□ -0.86
CHMP4BP1-201ENST00000556017 MRPL32Q9BYC8 188 aaKnown RBP9.68□□□□□ -0.86
CHMP4BP1-201ENST00000556017 MDFICQ9P1T7 246 aa9.68□□□□□ -0.86
CHMP4BP1-201ENST00000556017 CCDC160A6NGH7 325 aa9.67□□□□□ -0.86
CHMP4BP1-201ENST00000556017 K7EQD1 137 aa9.67□□□□□ -0.86
CHMP4BP1-201ENST00000556017 SFTA3P0C7M3 94 aa9.67□□□□□ -0.86
CHMP4BP1-201ENST00000556017 INPP1P49441 399 aa9.67□□□□□ -0.86
CHMP4BP1-201ENST00000556017 BCAP31P51572 246 aa9.67□□□□□ -0.86
CHMP4BP1-201ENST00000556017 HAMPP81172 84 aa9.67□□□□□ -0.86
CHMP4BP1-201ENST00000556017 BAXQ07812 192 aa9.67□□□□□ -0.86
CHMP4BP1-201ENST00000556017 RAB32Q13637 225 aa9.67□□□□□ -0.86
CHMP4BP1-201ENST00000556017 MRPL23Q16540 153 aaKnown RBP9.67□□□□□ -0.86
CHMP4BP1-201ENST00000556017 FAM122CQ6P4D5 195 aa9.67□□□□□ -0.86
CHMP4BP1-201ENST00000556017 MIR17HGQ75NE6 70 aa9.67□□□□□ -0.86
CHMP4BP1-201ENST00000556017 NEGR1Q7Z3B1 354 aa9.67□□□□□ -0.86
CHMP4BP1-201ENST00000556017 Q8TAT8 98 aa9.67□□□□□ -0.86
CHMP4BP1-201ENST00000556017 C2orf50Q96LR7 162 aa9.67□□□□□ -0.86
CHMP4BP1-201ENST00000556017 FAM25EA8MYX2 175 aa9.66□□□□□ -0.86
CHMP4BP1-201ENST00000556017 RGS13O14921 159 aa9.66□□□□□ -0.86
CHMP4BP1-201ENST00000556017 TCRBP04435 133 aa9.66□□□□□ -0.86
CHMP4BP1-201ENST00000556017 FGF7P21781 194 aa9.66□□□□□ -0.86
CHMP4BP1-201ENST00000556017 S100A11P31949 105 aa9.66□□□□□ -0.86
CHMP4BP1-201ENST00000556017 NFE4Q86UQ8 179 aa9.66□□□□□ -0.86
CHMP4BP1-201ENST00000556017 IQCF2Q8IXL9 164 aa9.66□□□□□ -0.86
CHMP4BP1-201ENST00000556017 C12orf45Q8N5I9 185 aaPredicted RBP9.66□□□□□ -0.86
CHMP4BP1-201ENST00000556017 FXYD5Q96DB9 178 aa9.66□□□□□ -0.86
CHMP4BP1-201ENST00000556017 PHYHIPLQ96FC7 376 aa9.66□□□□□ -0.86
CHMP4BP1-201ENST00000556017 NPCDR1Q9BY65 106 aa9.66□□□□□ -0.86
CHMP4BP1-201ENST00000556017 TIMM9Q9Y5J7 89 aa9.66□□□□□ -0.86
CHMP4BP1-201ENST00000556017 TRAV6A0A075B6T7 132 aa9.65□□□□□ -0.86
CHMP4BP1-201ENST00000556017 LRCOL1A6NCL2 159 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms