RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 KLF12Q9Y4X4 402 aa8.21□□□□□ -1.1
TMEM260-208ENST00000555905 NOTCH3Q9UM47 2321 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 SORL1Q92673 2214 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 A0A0J9YX75 114 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 TMEM218A2RU14 115 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 ZNF727A8MUV8 499 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 F6UB75 175 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 CD7P09564 240 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 ZNF705DP0CH99 300 aaPredicted RBP8.2□□□□□ -1.1
TMEM260-208ENST00000555905 ZNF705BP0CI00 300 aaPredicted RBP8.2□□□□□ -1.1
TMEM260-208ENST00000555905 TAS2R60P59551 318 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 DEFB1P60022 68 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 FLI1Q01543 452 aaPredicted RBP8.2□□□□□ -1.1
TMEM260-208ENST00000555905 ERCC8Q13216 396 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 ACTL10Q5JWF8 245 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 PRNTQ86SH4 94 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 APRG1Q8IVJ8 170 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 LINC00477Q96M19 166 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 DERL1Q9BUN8 251 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 PPP1R14DQ9NXH3 145 aa8.2□□□□□ -1.1
TMEM260-208ENST00000555905 TRAV8-1A0A0A6YYK1 113 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 KNCNA6PVL3 124 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 NPIPB6E9PJ23 425 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 HLA-DRB4P13762 266 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 GNG4P50150 75 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 ZNF138P52744 262 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 EGFEM1PQ0D2K5 195 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 GDF5OSQ5U4N7 250 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 STHQ8IWL8 128 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 SGK494Q96LW2 274 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 NDFIP1Q9BT67 221 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 AGPAT4-IT1Q9H0P7 198 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 PSG8Q9UQ74 426 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 HLA-DRB4X5D2U9 266 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 PKD1L1Q8TDX9 2849 aa8.19□□□□□ -1.1
TMEM260-208ENST00000555905 TRBV6-1A0A0K0K1D8 114 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 C9JCJ5 164 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 F8W036 122 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 G3V4G9 280 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 LTAP01374 205 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 IGLV2-11P01706 119 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 ZNF124Q15973 351 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 CENPWQ5EE01 88 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 SAPCD1Q5SSQ6 148 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 Q86TA4 180 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 BAGE2Q86Y30 109 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 OR4B1Q8NGF8 309 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 NIPSNAP3BQ9BS92 247 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 ZNF492Q9P255 531 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 ZFP30Q9Y2G7 519 aa8.18□□□□□ -1.1
TMEM260-208ENST00000555905 KRBOX1C9JBD0 128 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 H3BMM0 161 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 IGKV3-20P01619 116 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 CT45A10P0DMU9 189 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 TMEM241Q24JQ0 296 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 Q8TAT8 98 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 SMIM12Q96EX1 92 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 IGF2BP2-AS1Q96M15 143 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 ODF3Q96PU9 254 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 PRR25Q96S07 402 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 SEC11CQ9BY50 192 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 C19orf73Q9NVV2 129 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 NAT8Q9UHE5 227 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 LENEPQ9Y5L5 61 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 CMYA5Q8N3K9 4069 aa8.17□□□□□ -1.1
TMEM260-208ENST00000555905 TRBV7-9A0A0J9YWB2 115 aa8.16□□□□□ -1.1
TMEM260-208ENST00000555905 TSPOP30536 169 aa8.16□□□□□ -1.1
TMEM260-208ENST00000555905 LEPP41159 167 aa8.16□□□□□ -1.1
TMEM260-208ENST00000555905 KRTAP10-11P60412 298 aa8.16□□□□□ -1.1
TMEM260-208ENST00000555905 TMEM183AQ8IXX5 376 aa8.16□□□□□ -1.1
TMEM260-208ENST00000555905 DEFB125Q8N687 156 aa8.16□□□□□ -1.1
TMEM260-208ENST00000555905 CLUHP3Q96NS8 147 aa8.16□□□□□ -1.1
TMEM260-208ENST00000555905 WFDC10AQ9H1F0 79 aa8.16□□□□□ -1.1
TMEM260-208ENST00000555905 LY96Q9Y6Y9 160 aa8.16□□□□□ -1.1
TMEM260-208ENST00000555905 TRBV20OR9-2A0A075B6H5 130 aa8.15□□□□□ -1.1
TMEM260-208ENST00000555905 MGST1P10620 155 aaKnown RBP8.15□□□□□ -1.1
TMEM260-208ENST00000555905 ADCYAP1P18509 176 aa8.15□□□□□ -1.1
TMEM260-208ENST00000555905 NUTF2P61970 127 aaKnown RBP8.15□□□□□ -1.1
TMEM260-208ENST00000555905 TRPT1Q86TN4 253 aaKnown RBP8.15□□□□□ -1.1
TMEM260-208ENST00000555905 Q8N1Y9 231 aa8.15□□□□□ -1.1
TMEM260-208ENST00000555905 NHLRC2Q8NBF2 726 aa8.15□□□□□ -1.1
TMEM260-208ENST00000555905 TVP23CQ96ET8 276 aa8.15□□□□□ -1.1
TMEM260-208ENST00000555905 ASCL2Q99929 193 aa8.15□□□□□ -1.1
TMEM260-208ENST00000555905 BIN3Q9NQY0 253 aa8.15□□□□□ -1.1
TMEM260-208ENST00000555905 AGRNO00468 2067 aa8.15□□□□□ -1.11
TMEM260-208ENST00000555905 PGPEP1LA6NFU8 196 aa8.14□□□□□ -1.11
TMEM260-208ENST00000555905 A8MTW9 85 aa8.14□□□□□ -1.11
TMEM260-208ENST00000555905 GPX1P07203 203 aa8.14□□□□□ -1.11
TMEM260-208ENST00000555905 PNRC1Q12796 327 aaPredicted RBP8.14□□□□□ -1.11
TMEM260-208ENST00000555905 ADIRFQ15847 76 aa8.14□□□□□ -1.11
TMEM260-208ENST00000555905 SMUG1Q53HV7 270 aa8.14□□□□□ -1.11
TMEM260-208ENST00000555905 C10orf91Q5T1B1 145 aa8.14□□□□□ -1.11
TMEM260-208ENST00000555905 OCC1Q8TAD7 63 aa8.14□□□□□ -1.11
TMEM260-208ENST00000555905 FAM19A4Q96LR4 140 aa8.14□□□□□ -1.11
TMEM260-208ENST00000555905 C8orf49Q96NF6 230 aa8.14□□□□□ -1.11
TMEM260-208ENST00000555905 TUBA4BQ9H853 241 aa8.14□□□□□ -1.11
TMEM260-208ENST00000555905 SRD5A3Q9H8P0 318 aa8.14□□□□□ -1.11
TMEM260-208ENST00000555905 SDF2L1Q9HCN8 221 aa8.14□□□□□ -1.11
TMEM260-208ENST00000555905 CARHSP1Q9Y2V2 147 aaKnown RBP8.14□□□□□ -1.11
TMEM260-208ENST00000555905 IGLV2-8P01709 118 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms