RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 DYNAPQ8N1N2 210 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 OR4C5Q8NGB2 326 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 Q8TAT8 98 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 FAM110DQ8TAY7 271 aaPredicted RBP5.45□□□□□ -1.54
TDP1-213ENST00000555880 DPF1Q92782 380 aa5.45□□□□□ -1.54
TDP1-213ENST00000555880 BSNQ9UPA5 3926 aa5.44□□□□□ -1.54
TDP1-213ENST00000555880 FABP5P3A8MUU1 101 aa5.44□□□□□ -1.54
TDP1-213ENST00000555880 CCL25O15444 150 aa5.44□□□□□ -1.54
TDP1-213ENST00000555880 PPBPP02775 128 aa5.44□□□□□ -1.54
TDP1-213ENST00000555880 COX8AP10176 69 aa5.44□□□□□ -1.54
TDP1-213ENST00000555880 UBE2E1P51965 193 aa5.44□□□□□ -1.54
TDP1-213ENST00000555880 RHOGP84095 191 aa5.44□□□□□ -1.54
TDP1-213ENST00000555880 ECSCRQ19T08 205 aa5.44□□□□□ -1.54
TDP1-213ENST00000555880 BVES-AS1Q5T3Y7 98 aa5.44□□□□□ -1.54
TDP1-213ENST00000555880 OR1N2Q8NGR9 330 aa5.44□□□□□ -1.54
TDP1-213ENST00000555880 ZNF502Q8TBZ5 544 aa5.44□□□□□ -1.54
TDP1-213ENST00000555880 VGLL1Q99990 258 aa5.44□□□□□ -1.54
TDP1-213ENST00000555880 SLC50A1Q9BRV3 221 aa5.44□□□□□ -1.54
TDP1-213ENST00000555880 MCRIP2Q9BUT9 160 aaKnown RBP5.44□□□□□ -1.54
TDP1-213ENST00000555880 SPTBN1Q01082 2364 aaKnown RBP5.44□□□□□ -1.54
TDP1-213ENST00000555880 A0A087X0K7 114 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 IGHV2-70DA0A0C4DH43 119 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 MUC21A0A0G2JKD1 596 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 MUC21A0A140T8X8 626 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 RBAKDNA6NC62 111 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 IGLC6P0CF74 106 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 ZFP36P26651 326 aaKnown RBP5.43□□□□□ -1.54
TDP1-213ENST00000555880 CDSNQ15517 529 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 LGALS9BQ3B8N2 356 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 MUC21Q5SSG8 566 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 LGALS9CQ6DKI2 356 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 Q6ZS46 218 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 DEFB125Q8N687 156 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 Q8N9W7 124 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 SIRPDQ9H106 197 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 MAP1LC3AQ9H492 121 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 TP73-AS1Q9UF72 201 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 SMAD5-AS1Q9Y6J3 95 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 ATRXP46100 2492 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 IGHV3OR16-8A0A075B7F1 116 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 IGHV3-35A0A0C4DH35 117 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 CLEC3BP05452 202 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 Q6ZVH6 145 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 EEF1AKMT3Q96AZ1 226 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 METTL26Q96S19 204 aa5.43□□□□□ -1.54
TDP1-213ENST00000555880 TRBV7-1A0A0A6YYK4 115 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 TMEM238LA0A1B0GVL6 79 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 ATP6V0E1O15342 81 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 BUB3O43684 328 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 CD5LO43866 347 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 NCR2O95944 276 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 NPYP01303 97 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 SAA4P35542 130 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 ZNF80P51504 273 aaPredicted RBP5.42□□□□□ -1.54
TDP1-213ENST00000555880 EFNA4P52798 201 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 CACNG7P62955 275 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 SEC11AP67812 179 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 LOXL1Q08397 574 aaPredicted RBP5.42□□□□□ -1.54
TDP1-213ENST00000555880 FAM106AQ4KMX7 169 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 PSMG4Q5JS54 123 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 TMEM78Q5T7P6 136 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 IGFL4Q6B9Z1 124 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 SMIM15Q7Z3B0 74 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 IFI27L1Q96BM0 104 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 CNFNQ9BYD5 112 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 UBTD1Q9HAC8 227 aa5.42□□□□□ -1.54
TDP1-213ENST00000555880 NXT2Q9NPJ8 142 aaKnown RBP5.42□□□□□ -1.54
TDP1-213ENST00000555880 A0A096LNJ9 63 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 CBY3A6NI87 242 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 SMKR1H3BMG3 65 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 TAX1BP3O14907 124 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 IGHG4P01861 327 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 HLA-DMBP28068 263 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 TMEM97Q5BJF2 176 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 CLEC19AQ6UXS0 136 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 RNF182Q8N6D2 247 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 NPFFR1Q9GZQ6 430 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 A6NDN8 102 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 ATP5G2Q06055 141 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 ERCC8Q13216 396 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 KLK9Q2XQG4 91 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 PRSS57Q6UWY2 283 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 C2orf91Q6ZV80 131 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 IL17RELQ6ZVW7 336 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 OR9G4Q8NGQ1 327 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 MRPL53Q96EL3 112 aaKnown RBP5.41□□□□□ -1.54
TDP1-213ENST00000555880 AP1S3Q96PC3 154 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 HIF1ANQ9NWT6 349 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 PEF1Q9UBV8 284 aaKnown RBP5.41□□□□□ -1.54
TDP1-213ENST00000555880 KLK9Q9UKQ9 250 aa5.41□□□□□ -1.54
TDP1-213ENST00000555880 NCOR2Q9Y618 2525 aa5.4□□□□□ -1.54
TDP1-213ENST00000555880 COL6A6A6NMZ7 2263 aa5.4□□□□□ -1.54
TDP1-213ENST00000555880 CACNA1BQ00975 2339 aa5.4□□□□□ -1.55
TDP1-213ENST00000555880 IGHV3-66A0A0C4DH42 116 aa5.4□□□□□ -1.55
TDP1-213ENST00000555880 A1L4Q6 167 aa5.4□□□□□ -1.55
TDP1-213ENST00000555880 K7EP13 123 aa5.4□□□□□ -1.55
TDP1-213ENST00000555880 SMAD7O15105 426 aaKnown RBP5.4□□□□□ -1.55
TDP1-213ENST00000555880 NPFFO15130 113 aa5.4□□□□□ -1.55
TDP1-213ENST00000555880 SNAI2O43623 268 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms